RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CHTF8P0CG12 524 aa7□□□□□ -1.29
NEDD9-201ENST00000379433 LINC00575Q6W349 94 aa7□□□□□ -1.29
NEDD9-201ENST00000379433 IGLV6-57P01721 117 aa6.99□□□□□ -1.29
NEDD9-201ENST00000379433 COX7BP24311 80 aa6.99□□□□□ -1.29
NEDD9-201ENST00000379433 hDV103S1A0JD37 113 aa6.98□□□□□ -1.29
NEDD9-201ENST00000379433 C7orf33Q8WU49 177 aa6.98□□□□□ -1.29
NEDD9-201ENST00000379433 Q5VV11 94 aa6.98□□□□□ -1.29
NEDD9-201ENST00000379433 BCE1O60756 84 aa6.97□□□□□ -1.29
NEDD9-201ENST00000379433 PLECQ15149 4684 aaKnown RBP6.97□□□□□ -1.29
NEDD9-201ENST00000379433 TMEM254Q8TBM7 123 aa6.97□□□□□ -1.29
NEDD9-201ENST00000379433 APLNQ9ULZ1 77 aa6.97□□□□□ -1.29
NEDD9-201ENST00000379433 ATP5EP2Q5VTU8 51 aa6.96□□□□□ -1.29
NEDD9-201ENST00000379433 ADM2Q7Z4H4 148 aa6.95□□□□□ -1.3
NEDD9-201ENST00000379433 C3orf84H3BNL1 204 aa6.94□□□□□ -1.3
NEDD9-201ENST00000379433 PRR15LQ9BU68 103 aa6.94□□□□□ -1.3
NEDD9-201ENST00000379433 A0A096LNI7 61 aa6.94□□□□□ -1.3
NEDD9-201ENST00000379433 LINC00167Q96N53 147 aa6.94□□□□□ -1.3
NEDD9-201ENST00000379433 STARD9Q9P2P6 4700 aa6.94□□□□□ -1.3
NEDD9-201ENST00000379433 ETDCA0A1B0GVM5 59 aa6.93□□□□□ -1.3
NEDD9-201ENST00000379433 PRLHP81277 87 aa6.92□□□□□ -1.3
NEDD9-201ENST00000379433 ST20-AS1Q8NBB2 130 aa6.92□□□□□ -1.3
NEDD9-201ENST00000379433 C1orf64Q8NEQ6 169 aa6.92□□□□□ -1.3
NEDD9-201ENST00000379433 KMT2AQ03164 3969 aa6.92□□□□□ -1.3
NEDD9-201ENST00000379433 LY6G6CO95867 125 aa6.92□□□□□ -1.3
NEDD9-201ENST00000379433 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
NEDD9-201ENST00000379433 A0A0G2JQZ4 141 aa6.91□□□□□ -1.3
NEDD9-201ENST00000379433 A0A1W2PNN7 141 aa6.91□□□□□ -1.3
NEDD9-201ENST00000379433 HAMPP81172 84 aa6.91□□□□□ -1.3
NEDD9-201ENST00000379433 MOBPQ13875 183 aa6.91□□□□□ -1.3
NEDD9-201ENST00000379433 C1orf134Q5TEV5 83 aa6.91□□□□□ -1.3
NEDD9-201ENST00000379433 LINC00476Q8WZB0 136 aa6.91□□□□□ -1.3
NEDD9-201ENST00000379433 ELOF1P60002 83 aaKnown RBP6.9□□□□□ -1.3
NEDD9-201ENST00000379433 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.3
NEDD9-201ENST00000379433 NBDYA0A0U1RRE5 68 aa6.9□□□□□ -1.31
NEDD9-201ENST00000379433 NUPR2A6NF83 97 aa6.9□□□□□ -1.31
NEDD9-201ENST00000379433 UBL5Q9BZL1 73 aa6.9□□□□□ -1.31
NEDD9-201ENST00000379433 JMJD7-PLA2G4BH0Y9G9 81 aa6.89□□□□□ -1.31
NEDD9-201ENST00000379433 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
NEDD9-201ENST00000379433 MUC7Q8TAX7 377 aa6.89□□□□□ -1.31
NEDD9-201ENST00000379433 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
NEDD9-201ENST00000379433 ERC2-IT1O76042 136 aa6.88□□□□□ -1.31
NEDD9-201ENST00000379433 TRBV7-4A0A0J9YYF1 115 aa6.87□□□□□ -1.31
NEDD9-201ENST00000379433 CDK2AP2O75956 126 aa6.87□□□□□ -1.31
NEDD9-201ENST00000379433 NREPQ16612 68 aa6.87□□□□□ -1.31
NEDD9-201ENST00000379433 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
NEDD9-201ENST00000379433 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-201ENST00000379433 CASC2Q6XLA1 102 aa6.86□□□□□ -1.31
NEDD9-201ENST00000379433 CYP4F30PQ9H0H9 118 aa6.86□□□□□ -1.31
NEDD9-201ENST00000379433 KRTAP16-1A8MUX0 517 aa6.86□□□□□ -1.31
NEDD9-201ENST00000379433 PANO1I0J062 215 aa6.86□□□□□ -1.31
NEDD9-201ENST00000379433 LIMD2Q9BT23 127 aa6.86□□□□□ -1.31
NEDD9-201ENST00000379433 IGLV1-50A0A075B6I6 118 aa6.85□□□□□ -1.31
NEDD9-201ENST00000379433 Q9BRP9 147 aa6.85□□□□□ -1.31
NEDD9-201ENST00000379433 IGLV9-49A0A0B4J1Y8 123 aa6.85□□□□□ -1.31
NEDD9-201ENST00000379433 KCNQ1DNQ9H478 68 aa6.84□□□□□ -1.31
NEDD9-201ENST00000379433 DNAH1Q9P2D7 4330 aa6.84□□□□□ -1.31
NEDD9-201ENST00000379433 PRR4Q16378 134 aa6.83□□□□□ -1.32
NEDD9-201ENST00000379433 Q6ZQT0 140 aa6.83□□□□□ -1.32
NEDD9-201ENST00000379433 Q6ZRX8 168 aa6.83□□□□□ -1.32
NEDD9-201ENST00000379433 KRTAP11-1Q8IUC1 163 aa6.83□□□□□ -1.32
NEDD9-201ENST00000379433 OBSCN-AS1Q96MR7 158 aa6.83□□□□□ -1.32
NEDD9-201ENST00000379433 Q8N9L7 120 aa6.82□□□□□ -1.32
NEDD9-201ENST00000379433 TLX1NBP0CAT3 122 aa6.81□□□□□ -1.32
NEDD9-201ENST00000379433 Q8N377 158 aa6.81□□□□□ -1.32
NEDD9-201ENST00000379433 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-201ENST00000379433 DEFB116Q30KQ4 102 aa6.78□□□□□ -1.32
NEDD9-201ENST00000379433 C14orf177Q52M58 125 aa6.78□□□□□ -1.32
NEDD9-201ENST00000379433 C9orf163Q8N9P6 203 aa6.77□□□□□ -1.33
NEDD9-201ENST00000379433 CNBPP62633 177 aaKnown RBP6.76□□□□□ -1.33
NEDD9-201ENST00000379433 DHRS4-AS1Q9P1J3 65 aa6.76□□□□□ -1.33
NEDD9-201ENST00000379433 A0A087WTM6 91 aa6.76□□□□□ -1.33
NEDD9-201ENST00000379433 BPY2O14599 106 aa6.75□□□□□ -1.33
NEDD9-201ENST00000379433 C1orf137Q5JT78 98 aa6.75□□□□□ -1.33
NEDD9-201ENST00000379433 Q6ZRN7 208 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-201ENST00000379433 RTL8CO15255 209 aa6.74□□□□□ -1.33
NEDD9-201ENST00000379433 LINC01547P58512 204 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-201ENST00000379433 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-201ENST00000379433 ANAPC11Q9NYG5 84 aa6.74□□□□□ -1.33
NEDD9-201ENST00000379433 ROMO1P60602 79 aa6.73□□□□□ -1.33
NEDD9-201ENST00000379433 Q8N9P0 234 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-201ENST00000379433 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
NEDD9-201ENST00000379433 IGLV5-52A0A0A0MRZ9 124 aa6.73□□□□□ -1.33
NEDD9-201ENST00000379433 LOC110117498A0A087WWA1 95 aa6.72□□□□□ -1.33
NEDD9-201ENST00000379433 VPS13DQ5THJ4 4388 aa6.72□□□□□ -1.33
NEDD9-201ENST00000379433 FRAS1Q86XX4 4008 aa6.71□□□□□ -1.34
NEDD9-201ENST00000379433 SPRR1AP35321 89 aa6.71□□□□□ -1.34
NEDD9-201ENST00000379433 IGLV5-37A0A075B6J1 123 aa6.7□□□□□ -1.34
NEDD9-201ENST00000379433 LOC101927531A0A1B0GV80 90 aa6.7□□□□□ -1.34
NEDD9-201ENST00000379433 DNAH2Q9P225 4427 aa6.69□□□□□ -1.34
NEDD9-201ENST00000379433 A0A1W2PNM2 257 aa6.69□□□□□ -1.34
NEDD9-201ENST00000379433 PDE6GP18545 87 aa6.68□□□□□ -1.34
NEDD9-201ENST00000379433 A0A087WSZ3 146 aa6.67□□□□□ -1.34
NEDD9-201ENST00000379433 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
NEDD9-201ENST00000379433 DNAH6Q9C0G6 4158 aa6.67□□□□□ -1.34
NEDD9-201ENST00000379433 KRTAP10-2P60368 255 aa6.66□□□□□ -1.34
NEDD9-201ENST00000379433 LUZP6Q538Z0 58 aa6.66□□□□□ -1.34
NEDD9-201ENST00000379433 H3BQ85 93 aa6.66□□□□□ -1.34
NEDD9-201ENST00000379433 HYDINQ4G0P3 5121 aa6.65□□□□□ -1.34
NEDD9-201ENST00000379433 NOTCH2NLQ7Z3S9 236 aa6.65□□□□□ -1.34
NEDD9-201ENST00000379433 WWC2-AS2Q96NR7 200 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms