RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 FAM168BA1KXE4 195 aa12.8□□□□□ -0.36
PNKP-214ENST00000600573 MRPL55Q7Z7F7 128 aaKnown RBP12.8□□□□□ -0.36
PNKP-214ENST00000600573 CDIP1Q9H305 208 aa12.8□□□□□ -0.36
PNKP-214ENST00000600573 FAM240AA0A1B0GVK7 77 aa12.79□□□□□ -0.36
PNKP-214ENST00000600573 TMEM256-PLSCR3K7ERE1 68 aa12.79□□□□□ -0.36
PNKP-214ENST00000600573 IGLV1-50A0A075B6I6 118 aa12.78□□□□□ -0.36
PNKP-214ENST00000600573 H3BQ85 93 aa12.78□□□□□ -0.36
PNKP-214ENST00000600573 PRYO14603 147 aa12.78□□□□□ -0.36
PNKP-214ENST00000600573 FAM19A5Q7Z5A7 132 aaPredicted RBP12.78□□□□□ -0.36
PNKP-214ENST00000600573 IGKV2-24A0A0C4DH68 120 aa12.77□□□□□ -0.36
PNKP-214ENST00000600573 OBSCN-AS1Q96MR7 158 aa12.77□□□□□ -0.36
PNKP-214ENST00000600573 KRTAP7-1Q8IUC3 87 aa12.76□□□□□ -0.37
PNKP-214ENST00000600573 LINC00528Q8N1L1 170 aa12.76□□□□□ -0.37
PNKP-214ENST00000600573 KMT2AQ03164 3969 aa12.75□□□□□ -0.37
PNKP-214ENST00000600573 GHRHP01286 108 aa12.75□□□□□ -0.37
PNKP-214ENST00000600573 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.75□□□□□ -0.37
PNKP-214ENST00000600573 SIGMAR1Q99720 223 aa12.75□□□□□ -0.37
PNKP-214ENST00000600573 Q6ZQY7 126 aa12.74□□□□□ -0.37
PNKP-214ENST00000600573 RTL8CO15255 209 aa12.73□□□□□ -0.37
PNKP-214ENST00000600573 JMJD7-PLA2G4BH0Y9G9 81 aa12.73□□□□□ -0.37
PNKP-214ENST00000600573 ACYP1P07311 99 aa12.73□□□□□ -0.37
PNKP-214ENST00000600573 A0A1W2PNN7 141 aa12.71□□□□□ -0.37
PNKP-214ENST00000600573 RPL37AP8A6NKH3 93 aa12.71□□□□□ -0.37
PNKP-214ENST00000600573 SPRR1AP35321 89 aa12.71□□□□□ -0.37
PNKP-214ENST00000600573 DNAH2Q9P225 4427 aa12.71□□□□□ -0.37
PNKP-214ENST00000600573 IGLV5-52A0A0A0MRZ9 124 aa12.7□□□□□ -0.38
PNKP-214ENST00000600573 C14orf132Q9NPU4 83 aa12.7□□□□□ -0.38
PNKP-214ENST00000600573 ETDCA0A1B0GVM5 59 aa12.68□□□□□ -0.38
PNKP-214ENST00000600573 TNP2Q05952 138 aa12.68□□□□□ -0.38
PNKP-214ENST00000600573 EPM2AB3EWF7 344 aa12.67□□□□□ -0.38
PNKP-214ENST00000600573 CHTF8P0CG12 524 aa12.67□□□□□ -0.38
PNKP-214ENST00000600573 XGP55808 180 aa12.67□□□□□ -0.38
PNKP-214ENST00000600573 GAGE2AQ6NT46 116 aa12.67□□□□□ -0.38
PNKP-214ENST00000600573 SPACA4Q8TDM5 124 aa12.67□□□□□ -0.38
PNKP-214ENST00000600573 DPH3Q96FX2 82 aa12.66□□□□□ -0.38
PNKP-214ENST00000600573 KRTAP4-16G5E9R7 235 aaPredicted RBP12.66□□□□□ -0.38
PNKP-214ENST00000600573 REG3GQ6UW15 175 aa12.66□□□□□ -0.38
PNKP-214ENST00000600573 Q6ZRX8 168 aa12.66□□□□□ -0.38
PNKP-214ENST00000600573 DHRS4-AS1Q9P1J3 65 aa12.66□□□□□ -0.38
PNKP-214ENST00000600573 DNAH17Q9UFH2 4485 aa12.66□□□□□ -0.38
PNKP-214ENST00000600573 LCE6AA0A183 80 aa12.65□□□□□ -0.38
PNKP-214ENST00000600573 B5MCH6 92 aa12.65□□□□□ -0.38
PNKP-214ENST00000600573 A0A1B0GV72 72 aa12.64□□□□□ -0.39
PNKP-214ENST00000600573 LAMTOR3Q9UHA4 124 aa12.64□□□□□ -0.39
PNKP-214ENST00000600573 MT-ATP8P03928 68 aa12.62□□□□□ -0.39
PNKP-214ENST00000600573 UBE2BP63146 152 aa12.61□□□□□ -0.39
PNKP-214ENST00000600573 CCKP06307 115 aa12.59□□□□□ -0.39
PNKP-214ENST00000600573 RBM3P98179 157 aaKnown RBP12.59□□□□□ -0.39
PNKP-214ENST00000600573 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.59□□□□□ -0.39
PNKP-214ENST00000600573 SCGB1A1P11684 91 aa12.59□□□□□ -0.39
PNKP-214ENST00000600573 PHF5AQ7RTV0 110 aaKnown RBP12.59□□□□□ -0.39
PNKP-214ENST00000600573 KMT2CQ8NEZ4 4911 aaKnown RBP12.58□□□□□ -0.4
PNKP-214ENST00000600573 LOC110117498A0A087WWA1 95 aa12.57□□□□□ -0.4
PNKP-214ENST00000600573 PANO1I0J062 215 aa12.57□□□□□ -0.4
PNKP-214ENST00000600573 Q9BRP9 147 aa12.57□□□□□ -0.4
PNKP-214ENST00000600573 PLAC8Q9NZF1 115 aa12.57□□□□□ -0.4
PNKP-214ENST00000600573 LINC00336Q6ZUF6 198 aa12.56□□□□□ -0.4
PNKP-214ENST00000600573 HECTD4Q9Y4D8 3996 aa12.56□□□□□ -0.4
PNKP-214ENST00000600573 H0Y9J4 135 aa12.55□□□□□ -0.4
PNKP-214ENST00000600573 PDE6GP18545 87 aa12.55□□□□□ -0.4
PNKP-214ENST00000600573 NDUFV3P56181 108 aaKnown RBP12.55□□□□□ -0.4
PNKP-214ENST00000600573 HYDINQ4G0P3 5121 aa12.54□□□□□ -0.4
PNKP-214ENST00000600573 DSCR8Q96T75 97 aa12.54□□□□□ -0.4
PNKP-214ENST00000600573 Q6ZQT0 140 aa12.53□□□□□ -0.4
PNKP-214ENST00000600573 LINC00643Q86TS7 51 aa12.53□□□□□ -0.4
PNKP-214ENST00000600573 SMCR5Q8TEV8 140 aa12.53□□□□□ -0.4
PNKP-214ENST00000600573 SACSQ9NZJ4 4579 aa12.53□□□□□ -0.4
PNKP-214ENST00000600573 PCP4P48539 62 aa12.52□□□□□ -0.4
PNKP-214ENST00000600573 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.41
PNKP-214ENST00000600573 C21orf62-AS1Q17RA5 79 aa12.51□□□□□ -0.41
PNKP-214ENST00000600573 FAM19A1Q7Z5A9 133 aa12.51□□□□□ -0.41
PNKP-214ENST00000600573 FUSP35637 526 aaKnown RBP eCLIP12.51□□□□□ -0.41
PNKP-214ENST00000600573 KRTAP10-2P60368 255 aa12.51□□□□□ -0.41
PNKP-214ENST00000600573 Q8N377 158 aa12.49□□□□□ -0.41
PNKP-214ENST00000600573 IGLV5-48A0A075B6I7 105 aa12.48□□□□□ -0.41
PNKP-214ENST00000600573 TRBV7-4A0A0J9YYF1 115 aa12.48□□□□□ -0.41
PNKP-214ENST00000600573 BCE1O60756 84 aa12.48□□□□□ -0.41
PNKP-214ENST00000600573 LINC01547P58512 204 aaPredicted RBP12.48□□□□□ -0.41
PNKP-214ENST00000600573 DEFB105AQ8NG35 78 aa12.48□□□□□ -0.41
PNKP-214ENST00000600573 LINC00846Q9NV44 126 aa12.48□□□□□ -0.41
PNKP-214ENST00000600573 Q6Q795 121 aa12.47□□□□□ -0.41
PNKP-214ENST00000600573 RYR3Q15413 4870 aa12.47□□□□□ -0.41
PNKP-214ENST00000600573 TRBV7-7A0A0K0K1E9 115 aa12.45□□□□□ -0.42
PNKP-214ENST00000600573 ERC2-IT1O76042 136 aa12.45□□□□□ -0.42
PNKP-214ENST00000600573 PRLHP81277 87 aa12.45□□□□□ -0.42
PNKP-214ENST00000600573 DNAH11Q96DT5 4516 aa12.45□□□□□ -0.42
PNKP-214ENST00000600573 KRTAP11-1Q8IUC1 163 aa12.44□□□□□ -0.42
PNKP-214ENST00000600573 ST20-AS1Q8NBB2 130 aa12.44□□□□□ -0.42
PNKP-214ENST00000600573 UBE2AP49459 152 aa12.44□□□□□ -0.42
PNKP-214ENST00000600573 Q6JHZ5 121 aa12.42□□□□□ -0.42
PNKP-214ENST00000600573 Q6ZSA8 131 aa12.42□□□□□ -0.42
PNKP-214ENST00000600573 IMUPQ9GZP8 106 aa12.4□□□□□ -0.42
PNKP-214ENST00000600573 FAT2Q9NYQ8 4349 aa12.4□□□□□ -0.42
PNKP-214ENST00000600573 HIGD2AQ9BW72 106 aa12.39□□□□□ -0.43
PNKP-214ENST00000600573 UBL5Q9BZL1 73 aa12.39□□□□□ -0.43
PNKP-214ENST00000600573 KRTAP13-1Q8IUC0 172 aa12.38□□□□□ -0.43
PNKP-214ENST00000600573 DNAH5Q8TE73 4624 aa12.38□□□□□ -0.43
PNKP-214ENST00000600573 KRTAP10-1P60331 282 aa12.37□□□□□ -0.43
PNKP-214ENST00000600573 ATP5EP2Q5VTU8 51 aa12.37□□□□□ -0.43
PNKP-214ENST00000600573 DNAH8Q96JB1 4490 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms