RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 TRGC2P03986 189 aa8.86□□□□□ -0.99
LIM2-202ENST00000596399 FABP4P15090 132 aa8.86□□□□□ -0.99
LIM2-202ENST00000596399 ADAMTSL4-AS1Q5T5F5 129 aa8.86□□□□□ -0.99
LIM2-202ENST00000596399 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
LIM2-202ENST00000596399 MIEN1Q9BRT3 115 aa8.86□□□□□ -0.99
LIM2-202ENST00000596399 PLNP26678 52 aa8.85□□□□□ -0.99
LIM2-202ENST00000596399 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
LIM2-202ENST00000596399 ZNF73O43830 326 aaPredicted RBP8.84□□□□□ -0.99
LIM2-202ENST00000596399 DPM2O94777 84 aa8.84□□□□□ -0.99
LIM2-202ENST00000596399 NDUFC2O95298 119 aa8.84□□□□□ -0.99
LIM2-202ENST00000596399 LGALS3P17931 250 aaKnown RBP8.84□□□□□ -0.99
LIM2-202ENST00000596399 A0A0J9YXY3 114 aa8.82□□□□□ -1
LIM2-202ENST00000596399 COLCA2A8K830 154 aa8.82□□□□□ -1
LIM2-202ENST00000596399 IGKCP01834 107 aa8.82□□□□□ -1
LIM2-202ENST00000596399 NMUP48645 174 aa8.82□□□□□ -1
LIM2-202ENST00000596399 HERVK_113P61574 105 aa8.82□□□□□ -1
LIM2-202ENST00000596399 JOSD1Q15040 202 aaPredicted RBP8.82□□□□□ -1
LIM2-202ENST00000596399 HRCT1Q6UXD1 115 aa8.82□□□□□ -1
LIM2-202ENST00000596399 KRTAP19-2Q3LHN2 52 aa8.81□□□□□ -1
LIM2-202ENST00000596399 TMA7Q9Y2S6 64 aaKnown RBP8.8□□□□□ -1
LIM2-202ENST00000596399 HSPB8Q9UJY1 196 aa8.79□□□□□ -1
LIM2-202ENST00000596399 LOC105371267A0A1B0GV96 52 aa8.78□□□□□ -1
LIM2-202ENST00000596399 C9orf92A6NGG3 77 aa8.78□□□□□ -1
LIM2-202ENST00000596399 PCOTHQ58A44 107 aa8.77□□□□□ -1.01
LIM2-202ENST00000596399 CRCT1Q9UGL9 99 aa8.76□□□□□ -1.01
LIM2-202ENST00000596399 E9PLD3 99 aa8.75□□□□□ -1.01
LIM2-202ENST00000596399 OR13C6PQ8NH95 151 aa8.75□□□□□ -1.01
LIM2-202ENST00000596399 LITAFQ99732 161 aa8.75□□□□□ -1.01
LIM2-202ENST00000596399 SPRR1BP22528 89 aa8.74□□□□□ -1.01
LIM2-202ENST00000596399 MT1HP80294 61 aa8.74□□□□□ -1.01
LIM2-202ENST00000596399 LINC00308Q8TCZ7 52 aa8.74□□□□□ -1.01
LIM2-202ENST00000596399 IGLV8-61A0A075B6I0 122 aa8.73□□□□□ -1.01
LIM2-202ENST00000596399 HINT1P49773 126 aaPredicted RBP8.73□□□□□ -1.01
LIM2-202ENST00000596399 C5orf52A6NGY3 159 aa8.72□□□□□ -1.01
LIM2-202ENST00000596399 SPANXCQ9NY87 97 aa8.72□□□□□ -1.01
LIM2-202ENST00000596399 TTTY13Q9BZ97 58 aa8.71□□□□□ -1.02
LIM2-202ENST00000596399 H7C2G1 150 aa8.7□□□□□ -1.02
LIM2-202ENST00000596399 Q1RN00 199 aa8.7□□□□□ -1.02
LIM2-202ENST00000596399 DEFB105AQ8NG35 78 aa8.7□□□□□ -1.02
LIM2-202ENST00000596399 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
LIM2-202ENST00000596399 DHRS4-AS1Q9P1J3 65 aa8.7□□□□□ -1.02
LIM2-202ENST00000596399 LAMTOR3Q9UHA4 124 aa8.69□□□□□ -1.02
LIM2-202ENST00000596399 A0A0G2JQZ4 141 aa8.68□□□□□ -1.02
LIM2-202ENST00000596399 SYS1-DBNDD2H3BUS1 97 aa8.67□□□□□ -1.02
LIM2-202ENST00000596399 COX7BP24311 80 aa8.67□□□□□ -1.02
LIM2-202ENST00000596399 ELOF1P60002 83 aaKnown RBP8.67□□□□□ -1.02
LIM2-202ENST00000596399 C6orf99Q4VX62 202 aa8.67□□□□□ -1.02
LIM2-202ENST00000596399 SLC25A34Q6PIV7 304 aa8.67□□□□□ -1.02
LIM2-202ENST00000596399 CBY1Q9Y3M2 126 aa8.67□□□□□ -1.02
LIM2-202ENST00000596399 HIST1H2BKO60814 126 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 HIST1H2BJP06899 126 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 HIST1H2BOP23527 126 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 HIST1H2BBP33778 126 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 HIST1H2BDP58876 126 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 HIST1H2BCP62807 126 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 TAL2Q16559 108 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 HIST2H2BEQ16778 126 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.66□□□□□ -1.02
LIM2-202ENST00000596399 HIST1H2BHQ93079 126 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 HIST1H2BNQ99877 126 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 HIST1H2BMQ99879 126 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 SPANXDQ9BXN6 97 aa8.66□□□□□ -1.02
LIM2-202ENST00000596399 ZNF815PA8K554 130 aa8.65□□□□□ -1.02
LIM2-202ENST00000596399 TIMM17BO60830 172 aa8.65□□□□□ -1.02
LIM2-202ENST00000596399 SMIM29Q86T20 159 aa8.64□□□□□ -1.03
LIM2-202ENST00000596399 LINC01545Q5VT33 79 aa8.62□□□□□ -1.03
LIM2-202ENST00000596399 PRO1933Q9H354 126 aa8.62□□□□□ -1.03
LIM2-202ENST00000596399 TEX49A0A1B0GTD5 131 aa8.61□□□□□ -1.03
LIM2-202ENST00000596399 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
LIM2-202ENST00000596399 CD164Q04900 197 aa8.61□□□□□ -1.03
LIM2-202ENST00000596399 C1orf195Q5TG92 126 aa8.61□□□□□ -1.03
LIM2-202ENST00000596399 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
LIM2-202ENST00000596399 CFC1BP0CG36 223 aa8.59□□□□□ -1.03
LIM2-202ENST00000596399 LINC00518Q8N0U6 118 aa8.59□□□□□ -1.03
LIM2-202ENST00000596399 AKR1D1P51857 326 aa8.58□□□□□ -1.04
LIM2-202ENST00000596399 PET117Q6UWS5 81 aa8.58□□□□□ -1.04
LIM2-202ENST00000596399 C3orf79P0CE67 100 aa8.56□□□□□ -1.04
LIM2-202ENST00000596399 Q5XG85 94 aa8.56□□□□□ -1.04
LIM2-202ENST00000596399 FLGP20930 4061 aaPredicted RBP8.55□□□□□ -1.04
LIM2-202ENST00000596399 IGLV5-48A0A075B6I7 105 aa8.55□□□□□ -1.04
LIM2-202ENST00000596399 TRBV7-6A0A0J9YX20 115 aa8.55□□□□□ -1.04
LIM2-202ENST00000596399 A6NDN8 102 aa8.55□□□□□ -1.04
LIM2-202ENST00000596399 RPL37P61927 97 aaKnown RBP8.55□□□□□ -1.04
LIM2-202ENST00000596399 COA6Q5JTJ3 125 aaKnown RBP8.55□□□□□ -1.04
LIM2-202ENST00000596399 SCGB1D4Q6XE38 83 aa8.54□□□□□ -1.04
LIM2-202ENST00000596399 A0A1B0GWB2 263 aa8.53□□□□□ -1.04
LIM2-202ENST00000596399 M0R2T5 61 aa8.53□□□□□ -1.04
LIM2-202ENST00000596399 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
LIM2-202ENST00000596399 KRTDAPP60985 99 aa8.52□□□□□ -1.05
LIM2-202ENST00000596399 MUSTN1Q8IVN3 82 aa8.52□□□□□ -1.05
LIM2-202ENST00000596399 COX6B2Q6YFQ2 88 aa8.5□□□□□ -1.05
LIM2-202ENST00000596399 ATOH7Q8N100 152 aa8.5□□□□□ -1.05
LIM2-202ENST00000596399 PCP2Q8IVA1 136 aa8.49□□□□□ -1.05
LIM2-202ENST00000596399 IFITM1P13164 125 aa8.48□□□□□ -1.05
LIM2-202ENST00000596399 SMIM11BQ8TCY0 68 aa8.48□□□□□ -1.05
LIM2-202ENST00000596399 A4D1N5 150 aa8.44□□□□□ -1.06
LIM2-202ENST00000596399 TCL1BO95988 128 aa8.44□□□□□ -1.06
LIM2-202ENST00000596399 S100A6P06703 90 aa8.44□□□□□ -1.06
LIM2-202ENST00000596399 COPS9Q8WXC6 57 aa8.44□□□□□ -1.06
LIM2-202ENST00000596399 SMIM6P0DI80 62 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms