RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TENM2Q9NT68 2774 aa6.93□□□□□ -1.3
TOP3A-209ENST00000580095 RBM3P98179 157 aaKnown RBP6.93□□□□□ -1.3
TOP3A-209ENST00000580095 Q6ZRP5 223 aa6.93□□□□□ -1.3
TOP3A-209ENST00000580095 C11orf45Q8TAV5 145 aa6.93□□□□□ -1.3
TOP3A-209ENST00000580095 DIRC1Q969H9 104 aa6.93□□□□□ -1.3
TOP3A-209ENST00000580095 CMYA5Q8N3K9 4069 aa6.92□□□□□ -1.3
TOP3A-209ENST00000580095 GVQW2A0A096LPI5 108 aaPredicted RBP6.92□□□□□ -1.3
TOP3A-209ENST00000580095 GHRHP01286 108 aa6.92□□□□□ -1.3
TOP3A-209ENST00000580095 VPREB1P12018 145 aa6.92□□□□□ -1.3
TOP3A-209ENST00000580095 CD164Q04900 197 aa6.91□□□□□ -1.3
TOP3A-209ENST00000580095 CASC10Q5T4H9 136 aa6.91□□□□□ -1.3
TOP3A-209ENST00000580095 CSMD3Q7Z407 3707 aa6.91□□□□□ -1.3
TOP3A-209ENST00000580095 Q6ZQT0 140 aa6.9□□□□□ -1.3
TOP3A-209ENST00000580095 COX7BP24311 80 aa6.9□□□□□ -1.3
TOP3A-209ENST00000580095 TRBV7-6A0A0J9YX20 115 aa6.9□□□□□ -1.31
TOP3A-209ENST00000580095 HAMPP81172 84 aa6.9□□□□□ -1.31
TOP3A-209ENST00000580095 EGFEM1PQ0D2K5 195 aa6.89□□□□□ -1.31
TOP3A-209ENST00000580095 C4orf48Q5BLP8 95 aa6.89□□□□□ -1.31
TOP3A-209ENST00000580095 SCXQ7RTU7 201 aa6.89□□□□□ -1.31
TOP3A-209ENST00000580095 LYSTQ99698 3801 aa6.89□□□□□ -1.31
TOP3A-209ENST00000580095 UBL5Q9BZL1 73 aa6.89□□□□□ -1.31
TOP3A-209ENST00000580095 SERTAD4-AS1Q5TG53 156 aa6.88□□□□□ -1.31
TOP3A-209ENST00000580095 DEFB105AQ8NG35 78 aa6.88□□□□□ -1.31
TOP3A-209ENST00000580095 FAM168BA1KXE4 195 aa6.87□□□□□ -1.31
TOP3A-209ENST00000580095 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
TOP3A-209ENST00000580095 H3BNG1 76 aa6.87□□□□□ -1.31
TOP3A-209ENST00000580095 SYCNQ0VAF6 134 aa6.87□□□□□ -1.31
TOP3A-209ENST00000580095 FAM229BQ4G0N7 80 aa6.87□□□□□ -1.31
TOP3A-209ENST00000580095 ELOF1P60002 83 aaKnown RBP6.87□□□□□ -1.31
TOP3A-209ENST00000580095 PRR15Q8IV56 129 aa6.87□□□□□ -1.31
TOP3A-209ENST00000580095 COL7A1Q02388 2944 aa6.87□□□□□ -1.31
TOP3A-209ENST00000580095 M0R378 163 aa6.87□□□□□ -1.31
TOP3A-209ENST00000580095 LINC01556Q5JQF7 62 aa6.87□□□□□ -1.31
TOP3A-209ENST00000580095 MUC7Q8TAX7 377 aa6.86□□□□□ -1.31
TOP3A-209ENST00000580095 MPLKIPQ8TAP9 179 aa6.85□□□□□ -1.31
TOP3A-209ENST00000580095 LINC00588Q9Y4M8 146 aa6.85□□□□□ -1.31
TOP3A-209ENST00000580095 Q6ZVQ6 151 aa6.85□□□□□ -1.31
TOP3A-209ENST00000580095 KLKP1Q107X0 134 aa6.84□□□□□ -1.31
TOP3A-209ENST00000580095 F8WEM9 126 aa6.84□□□□□ -1.31
TOP3A-209ENST00000580095 RMI2Q96E14 147 aa6.84□□□□□ -1.31
TOP3A-209ENST00000580095 LOC110117498A0A087WWA1 95 aa6.83□□□□□ -1.32
TOP3A-209ENST00000580095 LINC01547P58512 204 aaPredicted RBP6.83□□□□□ -1.32
TOP3A-209ENST00000580095 NKAPP1Q8N9T2 125 aa6.83□□□□□ -1.32
TOP3A-209ENST00000580095 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.83□□□□□ -1.32
TOP3A-209ENST00000580095 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
TOP3A-209ENST00000580095 C7orf33Q8WU49 177 aa6.83□□□□□ -1.32
TOP3A-209ENST00000580095 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
TOP3A-209ENST00000580095 SRRM2Q9UQ35 2752 aaKnown RBP6.83□□□□□ -1.32
TOP3A-209ENST00000580095 Q8N9L7 120 aa6.81□□□□□ -1.32
TOP3A-209ENST00000580095 DNAH10OSP0CZ25 163 aa6.81□□□□□ -1.32
TOP3A-209ENST00000580095 DNAH10Q8IVF4 4471 aa6.8□□□□□ -1.32
TOP3A-209ENST00000580095 DNAH3Q8TD57 4116 aa6.8□□□□□ -1.32
TOP3A-209ENST00000580095 TRAV10A0A0B4J240 114 aa6.8□□□□□ -1.32
TOP3A-209ENST00000580095 TRBV7-4A0A0J9YYF1 115 aa6.8□□□□□ -1.32
TOP3A-209ENST00000580095 C3orf84H3BNL1 204 aa6.8□□□□□ -1.32
TOP3A-209ENST00000580095 HUWE1Q7Z6Z7 4374 aaKnown RBP6.79□□□□□ -1.32
TOP3A-209ENST00000580095 K7EIL1 84 aa6.79□□□□□ -1.32
TOP3A-209ENST00000580095 ATP5EP2Q5VTU8 51 aa6.79□□□□□ -1.32
TOP3A-209ENST00000580095 KRTAP7-1Q8IUC3 87 aa6.79□□□□□ -1.32
TOP3A-209ENST00000580095 TRAV7A0A075B6U4 112 aa6.78□□□□□ -1.32
TOP3A-209ENST00000580095 ST20-AS1Q8NBB2 130 aa6.78□□□□□ -1.32
TOP3A-209ENST00000580095 Q8N377 158 aa6.77□□□□□ -1.33
TOP3A-209ENST00000580095 KCNQ1DNQ9H478 68 aa6.77□□□□□ -1.33
TOP3A-209ENST00000580095 Q9BRP9 147 aa6.76□□□□□ -1.33
TOP3A-209ENST00000580095 MRPL55Q7Z7F7 128 aaKnown RBP6.76□□□□□ -1.33
TOP3A-209ENST00000580095 RBM12B-AS1Q9P1G2 102 aa6.76□□□□□ -1.33
TOP3A-209ENST00000580095 ERC2-IT1O76042 136 aa6.75□□□□□ -1.33
TOP3A-209ENST00000580095 IGKV2-24A0A0C4DH68 120 aa6.75□□□□□ -1.33
TOP3A-209ENST00000580095 A0A0G2JQZ4 141 aa6.75□□□□□ -1.33
TOP3A-209ENST00000580095 A0A1W2PNN7 141 aa6.75□□□□□ -1.33
TOP3A-209ENST00000580095 PDE6GP18545 87 aa6.75□□□□□ -1.33
TOP3A-209ENST00000580095 KRTAP1-5Q9BYS1 174 aa6.75□□□□□ -1.33
TOP3A-209ENST00000580095 ATP5EP56381 51 aaPredicted RBP6.74□□□□□ -1.33
TOP3A-209ENST00000580095 TM2D3Q9BRN9 247 aa6.74□□□□□ -1.33
TOP3A-209ENST00000580095 ETDCA0A1B0GVM5 59 aa6.73□□□□□ -1.33
TOP3A-209ENST00000580095 BPY2O14599 106 aa6.73□□□□□ -1.33
TOP3A-209ENST00000580095 KRTAP21-3Q3LHN1 58 aa6.73□□□□□ -1.33
TOP3A-209ENST00000580095 IGLV1-50A0A075B6I6 118 aa6.73□□□□□ -1.33
TOP3A-209ENST00000580095 Q6ZRX8 168 aa6.73□□□□□ -1.33
TOP3A-209ENST00000580095 DNAH1Q9P2D7 4330 aa6.72□□□□□ -1.33
TOP3A-209ENST00000580095 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.72□□□□□ -1.33
TOP3A-209ENST00000580095 BCE1O60756 84 aa6.72□□□□□ -1.33
TOP3A-209ENST00000580095 H3BQ85 93 aa6.71□□□□□ -1.33
TOP3A-209ENST00000580095 UBE2BP63146 152 aa6.71□□□□□ -1.33
TOP3A-209ENST00000580095 NREPQ16612 68 aa6.71□□□□□ -1.34
TOP3A-209ENST00000580095 NDUFC1O43677 76 aa6.7□□□□□ -1.34
TOP3A-209ENST00000580095 CXCL6P80162 114 aa6.7□□□□□ -1.34
TOP3A-209ENST00000580095 KRTAP4-16G5E9R7 235 aaPredicted RBP6.7□□□□□ -1.34
TOP3A-209ENST00000580095 DNAH7Q8WXX0 4024 aa6.7□□□□□ -1.34
TOP3A-209ENST00000580095 DNAH9Q9NYC9 4486 aa6.7□□□□□ -1.34
TOP3A-209ENST00000580095 TLX1NBP0CAT3 122 aa6.7□□□□□ -1.34
TOP3A-209ENST00000580095 A0A096LNI7 61 aa6.68□□□□□ -1.34
TOP3A-209ENST00000580095 A0A1W2PNM2 257 aa6.68□□□□□ -1.34
TOP3A-209ENST00000580095 PRLHP81277 87 aa6.68□□□□□ -1.34
TOP3A-209ENST00000580095 A8MU10 97 aa6.68□□□□□ -1.34
TOP3A-209ENST00000580095 PSCAO43653 123 aa6.68□□□□□ -1.34
TOP3A-209ENST00000580095 CHTF8P0CG12 524 aa6.68□□□□□ -1.34
TOP3A-209ENST00000580095 C1orf137Q5JT78 98 aa6.67□□□□□ -1.34
TOP3A-209ENST00000580095 DHRS4-AS1Q9P1J3 65 aa6.67□□□□□ -1.34
TOP3A-209ENST00000580095 PRYO14603 147 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms