RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 MRPL55Q7Z7F7 128 aaKnown RBP12.43□□□□□ -0.42
RBFOX1-215ENST00000553186 LINC00167Q96N53 147 aa12.43□□□□□ -0.42
RBFOX1-215ENST00000553186 PKIGQ9Y2B9 76 aa12.42□□□□□ -0.42
RBFOX1-215ENST00000553186 IGLV1-50A0A075B6I6 118 aa12.42□□□□□ -0.42
RBFOX1-215ENST00000553186 A0A1B0GX51 115 aa12.42□□□□□ -0.42
RBFOX1-215ENST00000553186 LINC00575Q6W349 94 aa12.42□□□□□ -0.42
RBFOX1-215ENST00000553186 HYDINQ4G0P3 5121 aa12.41□□□□□ -0.42
RBFOX1-215ENST00000553186 FUSP35637 526 aaKnown RBP eCLIP12.41□□□□□ -0.42
RBFOX1-215ENST00000553186 TNP2Q05952 138 aa12.41□□□□□ -0.42
RBFOX1-215ENST00000553186 TRBV7-6A0A0J9YX20 115 aa12.4□□□□□ -0.42
RBFOX1-215ENST00000553186 RPL37AP8A6NKH3 93 aa12.4□□□□□ -0.42
RBFOX1-215ENST00000553186 RTL8CO15255 209 aa12.4□□□□□ -0.42
RBFOX1-215ENST00000553186 DNAL4O96015 105 aa12.4□□□□□ -0.42
RBFOX1-215ENST00000553186 ELOF1P60002 83 aaKnown RBP12.39□□□□□ -0.43
RBFOX1-215ENST00000553186 HECTD4Q9Y4D8 3996 aa12.39□□□□□ -0.43
RBFOX1-215ENST00000553186 PANO1I0J062 215 aa12.38□□□□□ -0.43
RBFOX1-215ENST00000553186 BAALC-AS2P0C853 105 aa12.38□□□□□ -0.43
RBFOX1-215ENST00000553186 COX7BP24311 80 aa12.37□□□□□ -0.43
RBFOX1-215ENST00000553186 LINC00474Q9P2X8 69 aa12.37□□□□□ -0.43
RBFOX1-215ENST00000553186 MT-ATP8P03928 68 aa12.37□□□□□ -0.43
RBFOX1-215ENST00000553186 XGP55808 180 aa12.37□□□□□ -0.43
RBFOX1-215ENST00000553186 FRAS1Q86XX4 4008 aa12.36□□□□□ -0.43
RBFOX1-215ENST00000553186 hADV29S1A0JD25 119 aa12.35□□□□□ -0.43
RBFOX1-215ENST00000553186 PRYO14603 147 aa12.35□□□□□ -0.43
RBFOX1-215ENST00000553186 SPRR1AP35321 89 aa12.35□□□□□ -0.43
RBFOX1-215ENST00000553186 SACSQ9NZJ4 4579 aa12.35□□□□□ -0.43
RBFOX1-215ENST00000553186 KRTAP4-16G5E9R7 235 aaPredicted RBP12.35□□□□□ -0.43
RBFOX1-215ENST00000553186 LINC00528Q8N1L1 170 aa12.35□□□□□ -0.43
RBFOX1-215ENST00000553186 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.35□□□□□ -0.43
RBFOX1-215ENST00000553186 SPACA4Q8TDM5 124 aa12.33□□□□□ -0.44
RBFOX1-215ENST00000553186 IGLV5-52A0A0A0MRZ9 124 aa12.33□□□□□ -0.44
RBFOX1-215ENST00000553186 SNCGO76070 127 aa12.32□□□□□ -0.44
RBFOX1-215ENST00000553186 TEX49A0A1B0GTD5 131 aa12.32□□□□□ -0.44
RBFOX1-215ENST00000553186 ORMDL1Q9P0S3 153 aa12.32□□□□□ -0.44
RBFOX1-215ENST00000553186 A0A1B0GV72 72 aa12.3□□□□□ -0.44
RBFOX1-215ENST00000553186 EPM2AB3EWF7 344 aa12.3□□□□□ -0.44
RBFOX1-215ENST00000553186 PHF5AQ7RTV0 110 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-215ENST00000553186 FAT2Q9NYQ8 4349 aa12.29□□□□□ -0.44
RBFOX1-215ENST00000553186 DNAH11Q96DT5 4516 aa12.29□□□□□ -0.44
RBFOX1-215ENST00000553186 LCE6AA0A183 80 aa12.29□□□□□ -0.44
RBFOX1-215ENST00000553186 B5MCH6 92 aa12.28□□□□□ -0.44
RBFOX1-215ENST00000553186 KRTAP10-2P60368 255 aa12.28□□□□□ -0.44
RBFOX1-215ENST00000553186 REG3GQ6UW15 175 aa12.28□□□□□ -0.44
RBFOX1-215ENST00000553186 Q6ZRX8 168 aa12.28□□□□□ -0.44
RBFOX1-215ENST00000553186 Q6ZQY7 126 aa12.27□□□□□ -0.45
RBFOX1-215ENST00000553186 KRTAP11-1Q8IUC1 163 aa12.27□□□□□ -0.45
RBFOX1-215ENST00000553186 DPH3Q96FX2 82 aa12.26□□□□□ -0.45
RBFOX1-215ENST00000553186 ETDCA0A1B0GVM5 59 aa12.25□□□□□ -0.45
RBFOX1-215ENST00000553186 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.25□□□□□ -0.45
RBFOX1-215ENST00000553186 TMEM256-PLSCR3K7ERE1 68 aa12.24□□□□□ -0.45
RBFOX1-215ENST00000553186 INAFM2P0DMQ5 153 aa12.24□□□□□ -0.45
RBFOX1-215ENST00000553186 Q9BRP9 147 aa12.24□□□□□ -0.45
RBFOX1-215ENST00000553186 UBE2BP63146 152 aa12.22□□□□□ -0.45
RBFOX1-215ENST00000553186 DNAH5Q8TE73 4624 aa12.21□□□□□ -0.45
RBFOX1-215ENST00000553186 OBSCN-AS1Q96MR7 158 aa12.21□□□□□ -0.45
RBFOX1-215ENST00000553186 DHRS4-AS1Q9P1J3 65 aa12.2□□□□□ -0.46
RBFOX1-215ENST00000553186 PLAC8Q9NZF1 115 aa12.2□□□□□ -0.46
RBFOX1-215ENST00000553186 PKD1P98161 4303 aa12.19□□□□□ -0.46
RBFOX1-215ENST00000553186 H3BQ85 93 aa12.16□□□□□ -0.46
RBFOX1-215ENST00000553186 FAM19A1Q7Z5A9 133 aa12.16□□□□□ -0.46
RBFOX1-215ENST00000553186 ERC2-IT1O76042 136 aa12.15□□□□□ -0.46
RBFOX1-215ENST00000553186 SMCR5Q8TEV8 140 aa12.15□□□□□ -0.46
RBFOX1-215ENST00000553186 PRLHP81277 87 aa12.15□□□□□ -0.47
RBFOX1-215ENST00000553186 DNAH8Q96JB1 4490 aa12.14□□□□□ -0.47
RBFOX1-215ENST00000553186 GHRHP01286 108 aa12.13□□□□□ -0.47
RBFOX1-215ENST00000553186 FAM30AQ9NZY2 134 aa12.13□□□□□ -0.47
RBFOX1-215ENST00000553186 KMT2CQ8NEZ4 4911 aaKnown RBP12.13□□□□□ -0.47
RBFOX1-215ENST00000553186 FAM240AA0A1B0GVK7 77 aa12.12□□□□□ -0.47
RBFOX1-215ENST00000553186 LINC01547P58512 204 aaPredicted RBP12.12□□□□□ -0.47
RBFOX1-215ENST00000553186 C14orf132Q9NPU4 83 aa12.12□□□□□ -0.47
RBFOX1-215ENST00000553186 JMJD7-PLA2G4BH0Y9G9 81 aa12.12□□□□□ -0.47
RBFOX1-215ENST00000553186 H0Y9J4 135 aa12.11□□□□□ -0.47
RBFOX1-215ENST00000553186 KRTAP10-1P60331 282 aa12.11□□□□□ -0.47
RBFOX1-215ENST00000553186 ST20-AS1Q8NBB2 130 aa12.11□□□□□ -0.47
RBFOX1-215ENST00000553186 Q6ZSA8 131 aa12.1□□□□□ -0.47
RBFOX1-215ENST00000553186 Q8N377 158 aa12.1□□□□□ -0.47
RBFOX1-215ENST00000553186 LAMTOR3Q9UHA4 124 aa12.1□□□□□ -0.47
RBFOX1-215ENST00000553186 BCE1O60756 84 aa12.09□□□□□ -0.47
RBFOX1-215ENST00000553186 RYR2Q92736 4967 aa12.09□□□□□ -0.47
RBFOX1-215ENST00000553186 IGLV5-48A0A075B6I7 105 aa12.09□□□□□ -0.47
RBFOX1-215ENST00000553186 LINC00336Q6ZUF6 198 aa12.09□□□□□ -0.47
RBFOX1-215ENST00000553186 DEFB105AQ8NG35 78 aa12.08□□□□□ -0.48
RBFOX1-215ENST00000553186 ANAPC13Q9BS18 74 aa12.08□□□□□ -0.48
RBFOX1-215ENST00000553186 KRTAP13-1Q8IUC0 172 aa12.07□□□□□ -0.48
RBFOX1-215ENST00000553186 HIGD2AQ9BW72 106 aa12.07□□□□□ -0.48
RBFOX1-215ENST00000553186 NDUFV3P56181 108 aaKnown RBP12.06□□□□□ -0.48
RBFOX1-215ENST00000553186 CIRBP-AS1Q8TBR5 109 aa12.06□□□□□ -0.48
RBFOX1-215ENST00000553186 ACYP1P07311 99 aa12.05□□□□□ -0.48
RBFOX1-215ENST00000553186 RBM3P98179 157 aaKnown RBP12.05□□□□□ -0.48
RBFOX1-215ENST00000553186 UBE2AP49459 152 aa12.05□□□□□ -0.48
RBFOX1-215ENST00000553186 Q6Q795 121 aa12.05□□□□□ -0.48
RBFOX1-215ENST00000553186 PSORS1C2Q9UIG4 136 aa12.05□□□□□ -0.48
RBFOX1-215ENST00000553186 SCXQ7RTU7 201 aa12.02□□□□□ -0.48
RBFOX1-215ENST00000553186 SRRM2Q9UQ35 2752 aaKnown RBP12.02□□□□□ -0.49
RBFOX1-215ENST00000553186 GAGE2AQ6NT46 116 aa12.02□□□□□ -0.49
RBFOX1-215ENST00000553186 PKHD1P08F94 4074 aa12.01□□□□□ -0.49
RBFOX1-215ENST00000553186 C3orf22Q8N5N4 141 aa12.01□□□□□ -0.49
RBFOX1-215ENST00000553186 LOC110117498A0A087WWA1 95 aa12□□□□□ -0.49
RBFOX1-215ENST00000553186 A0A1B0GVY2 172 aa12□□□□□ -0.49
RBFOX1-215ENST00000553186 CCKP06307 115 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms