RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 KCNQ1DNQ9H478 68 aa11.01□□□□□ -0.65
TMEM50B-210ENST00000542230 OBSCN-AS1Q96MR7 158 aa11□□□□□ -0.65
TMEM50B-210ENST00000542230 LINC00528Q8N1L1 170 aa10.99□□□□□ -0.65
TMEM50B-210ENST00000542230 IGLV1-50A0A075B6I6 118 aa10.99□□□□□ -0.65
TMEM50B-210ENST00000542230 HYDINQ4G0P3 5121 aa10.99□□□□□ -0.65
TMEM50B-210ENST00000542230 IGLV5-37A0A075B6J1 123 aa10.98□□□□□ -0.65
TMEM50B-210ENST00000542230 GAGE2AQ6NT46 116 aa10.97□□□□□ -0.65
TMEM50B-210ENST00000542230 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
TMEM50B-210ENST00000542230 C16orf90A8MZG2 172 aa10.97□□□□□ -0.65
TMEM50B-210ENST00000542230 TMEM256-PLSCR3K7ERE1 68 aa10.97□□□□□ -0.65
TMEM50B-210ENST00000542230 DNAH17Q9UFH2 4485 aa10.96□□□□□ -0.66
TMEM50B-210ENST00000542230 PANO1I0J062 215 aa10.96□□□□□ -0.66
TMEM50B-210ENST00000542230 TRBV7-6A0A0J9YX20 115 aa10.95□□□□□ -0.66
TMEM50B-210ENST00000542230 PCP4P48539 62 aa10.95□□□□□ -0.66
TMEM50B-210ENST00000542230 Q6ZR54 194 aa10.95□□□□□ -0.66
TMEM50B-210ENST00000542230 SNCGO76070 127 aa10.95□□□□□ -0.66
TMEM50B-210ENST00000542230 INAFM2P0DMQ5 153 aa10.95□□□□□ -0.66
TMEM50B-210ENST00000542230 SMCR5Q8TEV8 140 aa10.95□□□□□ -0.66
TMEM50B-210ENST00000542230 KRTAP4-16G5E9R7 235 aaPredicted RBP10.94□□□□□ -0.66
TMEM50B-210ENST00000542230 C14orf177Q52M58 125 aa10.94□□□□□ -0.66
TMEM50B-210ENST00000542230 C9orf163Q8N9P6 203 aa10.94□□□□□ -0.66
TMEM50B-210ENST00000542230 LY6G6CO95867 125 aa10.93□□□□□ -0.66
TMEM50B-210ENST00000542230 KRTAP11-1Q8IUC1 163 aa10.92□□□□□ -0.66
TMEM50B-210ENST00000542230 Q9BRP9 147 aa10.92□□□□□ -0.66
TMEM50B-210ENST00000542230 FAM240AA0A1B0GVK7 77 aa10.92□□□□□ -0.66
TMEM50B-210ENST00000542230 DNAH6Q9C0G6 4158 aa10.92□□□□□ -0.66
TMEM50B-210ENST00000542230 SDIM1Q6ZPB5 146 aa10.91□□□□□ -0.66
TMEM50B-210ENST00000542230 A0A087WTM6 91 aa10.91□□□□□ -0.66
TMEM50B-210ENST00000542230 LAMTOR3Q9UHA4 124 aa10.91□□□□□ -0.66
TMEM50B-210ENST00000542230 B5MCH6 92 aa10.9□□□□□ -0.66
TMEM50B-210ENST00000542230 FRAS1Q86XX4 4008 aa10.9□□□□□ -0.66
TMEM50B-210ENST00000542230 SPRR1AP35321 89 aa10.9□□□□□ -0.66
TMEM50B-210ENST00000542230 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.89□□□□□ -0.67
TMEM50B-210ENST00000542230 PHF5AQ7RTV0 110 aaKnown RBP10.89□□□□□ -0.67
TMEM50B-210ENST00000542230 Q6ZRX8 168 aa10.89□□□□□ -0.67
TMEM50B-210ENST00000542230 PRYO14603 147 aa10.88□□□□□ -0.67
TMEM50B-210ENST00000542230 DEFB105AQ8NG35 78 aa10.88□□□□□ -0.67
TMEM50B-210ENST00000542230 ERC2-IT1O76042 136 aa10.88□□□□□ -0.67
TMEM50B-210ENST00000542230 ETDCA0A1B0GVM5 59 aa10.87□□□□□ -0.67
TMEM50B-210ENST00000542230 ST20-AS1Q8NBB2 130 aa10.87□□□□□ -0.67
TMEM50B-210ENST00000542230 JMJD7-PLA2G4BH0Y9G9 81 aa10.86□□□□□ -0.67
TMEM50B-210ENST00000542230 LINC00846Q9NV44 126 aa10.86□□□□□ -0.67
TMEM50B-210ENST00000542230 REG3GQ6UW15 175 aa10.85□□□□□ -0.67
TMEM50B-210ENST00000542230 WWC2-AS2Q96NR7 200 aa10.85□□□□□ -0.67
TMEM50B-210ENST00000542230 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.85□□□□□ -0.67
TMEM50B-210ENST00000542230 DNAH11Q96DT5 4516 aa10.85□□□□□ -0.67
TMEM50B-210ENST00000542230 RBM3P98179 157 aaKnown RBP10.84□□□□□ -0.67
TMEM50B-210ENST00000542230 DNAH5Q8TE73 4624 aa10.84□□□□□ -0.67
TMEM50B-210ENST00000542230 DNAH8Q96JB1 4490 aa10.84□□□□□ -0.67
TMEM50B-210ENST00000542230 CCKP06307 115 aa10.84□□□□□ -0.67
TMEM50B-210ENST00000542230 ACYP1P07311 99 aa10.84□□□□□ -0.67
TMEM50B-210ENST00000542230 C3orf22Q8N5N4 141 aa10.84□□□□□ -0.67
TMEM50B-210ENST00000542230 ALMS1Q8TCU4 4167 aa10.84□□□□□ -0.67
TMEM50B-210ENST00000542230 LINC00476Q8WZB0 136 aa10.83□□□□□ -0.68
TMEM50B-210ENST00000542230 LINC01547P58512 204 aaPredicted RBP10.83□□□□□ -0.68
TMEM50B-210ENST00000542230 PRLHP81277 87 aa10.83□□□□□ -0.68
TMEM50B-210ENST00000542230 Q8N377 158 aa10.83□□□□□ -0.68
TMEM50B-210ENST00000542230 NDUFV3P56181 108 aaKnown RBP10.82□□□□□ -0.68
TMEM50B-210ENST00000542230 C1orf134Q5TEV5 83 aa10.82□□□□□ -0.68
TMEM50B-210ENST00000542230 DPH3Q96FX2 82 aa10.82□□□□□ -0.68
TMEM50B-210ENST00000542230 Q6ZQT0 140 aa10.81□□□□□ -0.68
TMEM50B-210ENST00000542230 FAT2Q9NYQ8 4349 aa10.81□□□□□ -0.68
TMEM50B-210ENST00000542230 UBE2BP63146 152 aa10.81□□□□□ -0.68
TMEM50B-210ENST00000542230 RTL8CO15255 209 aa10.8□□□□□ -0.68
TMEM50B-210ENST00000542230 DHRS4-AS1Q9P1J3 65 aa10.79□□□□□ -0.68
TMEM50B-210ENST00000542230 TNP2Q05952 138 aa10.79□□□□□ -0.68
TMEM50B-210ENST00000542230 FAM19A1Q7Z5A9 133 aa10.78□□□□□ -0.68
TMEM50B-210ENST00000542230 SPACA4Q8TDM5 124 aa10.76□□□□□ -0.69
TMEM50B-210ENST00000542230 DSCR8Q96T75 97 aa10.76□□□□□ -0.69
TMEM50B-210ENST00000542230 SACSQ9NZJ4 4579 aa10.76□□□□□ -0.69
TMEM50B-210ENST00000542230 PKD1P98161 4303 aa10.76□□□□□ -0.69
TMEM50B-210ENST00000542230 LOC110117498A0A087WWA1 95 aa10.76□□□□□ -0.69
TMEM50B-210ENST00000542230 TRBV7-4A0A0J9YYF1 115 aa10.75□□□□□ -0.69
TMEM50B-210ENST00000542230 LINC00643Q86TS7 51 aa10.75□□□□□ -0.69
TMEM50B-210ENST00000542230 HIGD2AQ9BW72 106 aa10.74□□□□□ -0.69
TMEM50B-210ENST00000542230 IGKV3D-7A0A0C4DH55 119 aa10.73□□□□□ -0.69
TMEM50B-210ENST00000542230 H3BQ85 93 aa10.73□□□□□ -0.69
TMEM50B-210ENST00000542230 SCGB1A1P11684 91 aa10.73□□□□□ -0.69
TMEM50B-210ENST00000542230 LINC00474Q9P2X8 69 aa10.73□□□□□ -0.69
TMEM50B-210ENST00000542230 IGLV5-52A0A0A0MRZ9 124 aa10.72□□□□□ -0.69
TMEM50B-210ENST00000542230 IGLV5-48A0A075B6I7 105 aa10.7□□□□□ -0.7
TMEM50B-210ENST00000542230 EPM2AB3EWF7 344 aa10.7□□□□□ -0.7
TMEM50B-210ENST00000542230 KRTAP10-2P60368 255 aa10.7□□□□□ -0.7
TMEM50B-210ENST00000542230 GHRHP01286 108 aa10.7□□□□□ -0.7
TMEM50B-210ENST00000542230 TRBV7-7A0A0K0K1E9 115 aa10.69□□□□□ -0.7
TMEM50B-210ENST00000542230 A0A0G2JQZ4 141 aa10.68□□□□□ -0.7
TMEM50B-210ENST00000542230 SMIM29Q86T20 159 aa10.68□□□□□ -0.7
TMEM50B-210ENST00000542230 C3orf84H3BNL1 204 aa10.66□□□□□ -0.7
TMEM50B-210ENST00000542230 PKIGQ9Y2B9 76 aa10.66□□□□□ -0.7
TMEM50B-210ENST00000542230 PKHD1P08F94 4074 aa10.65□□□□□ -0.7
TMEM50B-210ENST00000542230 Q6Q795 121 aa10.65□□□□□ -0.71
TMEM50B-210ENST00000542230 PDE6GP18545 87 aa10.63□□□□□ -0.71
TMEM50B-210ENST00000542230 UBE2AP49459 152 aa10.63□□□□□ -0.71
TMEM50B-210ENST00000542230 FAM30AQ9NZY2 134 aa10.63□□□□□ -0.71
TMEM50B-210ENST00000542230 A0A087WVE0 104 aa10.62□□□□□ -0.71
TMEM50B-210ENST00000542230 Q6JHZ5 121 aa10.62□□□□□ -0.71
TMEM50B-210ENST00000542230 LRP1BQ9NZR2 4599 aa10.62□□□□□ -0.71
TMEM50B-210ENST00000542230 BCE1O60756 84 aa10.61□□□□□ -0.71
TMEM50B-210ENST00000542230 HAMPP81172 84 aa10.61□□□□□ -0.71
TMEM50B-210ENST00000542230 Q6ZVQ6 151 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms