RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 LYPD5Q6UWN5 251 aa1.44□□□□□ -2.18
CSDE1-211ENST00000525970 BPESC1Q9GZL8 116 aa1.44□□□□□ -2.18
CSDE1-211ENST00000525970 C22orf24Q9Y442 160 aa1.44□□□□□ -2.18
CSDE1-211ENST00000525970 MYO7AQ13402 2215 aa1.44□□□□□ -2.18
CSDE1-211ENST00000525970 USF3Q68DE3 2245 aa1.44□□□□□ -2.18
CSDE1-211ENST00000525970 KNTC1P50748 2209 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 ASCC3Q8N3C0 2202 aaKnown RBP1.43□□□□□ -2.18
CSDE1-211ENST00000525970 CLPSL1A2RUU4 121 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 LYNX1G3V0Z9 82 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 G3V318 75 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 DEFB109BQ30KR1 87 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 MINOS1Q5TGZ0 78 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 PRR15LQ9BU68 103 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 RHPN1-AS1Q9BWJ2 59 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 KAAG1Q9UBP8 84 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 U3KQA8 63 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 PI4KAP42356 2102 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 PDE4DIPQ5VU43 2346 aa1.43□□□□□ -2.18
CSDE1-211ENST00000525970 TRGV1A0A0A0MS02 117 aa1.42□□□□□ -2.18
CSDE1-211ENST00000525970 CCL18P55774 89 aa1.42□□□□□ -2.18
CSDE1-211ENST00000525970 COX6A2Q02221 97 aa1.42□□□□□ -2.18
CSDE1-211ENST00000525970 USMG5Q96IX5 58 aa1.42□□□□□ -2.18
CSDE1-211ENST00000525970 TRAV22A0A0B4J277 110 aa1.41□□□□□ -2.18
CSDE1-211ENST00000525970 TRBV7-4A0A0J9YYF1 115 aa1.41□□□□□ -2.18
CSDE1-211ENST00000525970 NUPR2A6NF83 97 aa1.41□□□□□ -2.18
CSDE1-211ENST00000525970 HCG22E2RYF7 251 aa1.41□□□□□ -2.18
CSDE1-211ENST00000525970 NDUFB1O75438 58 aa1.41□□□□□ -2.18
CSDE1-211ENST00000525970 ATP11AUNQ6ZP68 121 aa1.41□□□□□ -2.18
CSDE1-211ENST00000525970 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.18
CSDE1-211ENST00000525970 ETDCA0A1B0GVM5 59 aa1.4□□□□□ -2.19
CSDE1-211ENST00000525970 C10orf142B7Z368 130 aa1.4□□□□□ -2.19
CSDE1-211ENST00000525970 H3BUA1 57 aa1.4□□□□□ -2.19
CSDE1-211ENST00000525970 COX7BP24311 80 aa1.4□□□□□ -2.19
CSDE1-211ENST00000525970 DEFB131AP59861 70 aa1.4□□□□□ -2.19
CSDE1-211ENST00000525970 CLPSL2Q6UWE3 100 aa1.4□□□□□ -2.19
CSDE1-211ENST00000525970 LINC00575Q6W349 94 aa1.4□□□□□ -2.19
CSDE1-211ENST00000525970 Q6ZQY7 126 aa1.4□□□□□ -2.19
CSDE1-211ENST00000525970 C5orf56Q8N8D9 126 aa1.4□□□□□ -2.19
CSDE1-211ENST00000525970 CYP4F30PQ9H0H9 118 aa1.4□□□□□ -2.19
CSDE1-211ENST00000525970 NAV3Q8IVL0 2385 aa1.4□□□□□ -2.19
CSDE1-211ENST00000525970 ROS1P08922 2347 aa1.39□□□□□ -2.19
CSDE1-211ENST00000525970 TNCP24821 2201 aa1.39□□□□□ -2.19
CSDE1-211ENST00000525970 SPAG11BQ08648 103 aa1.39□□□□□ -2.19
CSDE1-211ENST00000525970 DEFB105AQ8NG35 78 aa1.39□□□□□ -2.19
CSDE1-211ENST00000525970 LINC00208Q96KT6 92 aa1.39□□□□□ -2.19
CSDE1-211ENST00000525970 CDC42SE2Q9NRR3 84 aa1.39□□□□□ -2.19
CSDE1-211ENST00000525970 H3BUX3 64 aa1.38□□□□□ -2.19
CSDE1-211ENST00000525970 RPL37AP61513 92 aaKnown RBP1.38□□□□□ -2.19
CSDE1-211ENST00000525970 COX17Q14061 63 aa1.38□□□□□ -2.19
CSDE1-211ENST00000525970 DEFB112Q30KQ8 113 aa1.38□□□□□ -2.19
CSDE1-211ENST00000525970 Q8IZM0 81 aa1.38□□□□□ -2.19
CSDE1-211ENST00000525970 CNTRLQ7Z7A1 2325 aa1.38□□□□□ -2.19
CSDE1-211ENST00000525970 ASXL3Q9C0F0 2248 aa1.38□□□□□ -2.19
CSDE1-211ENST00000525970 A0A0C4DFX4 3053 aa1.37□□□□□ -2.19
CSDE1-211ENST00000525970 LINC00959A0A1B0GUT2 108 aa1.37□□□□□ -2.19
CSDE1-211ENST00000525970 A8MTW9 85 aa1.37□□□□□ -2.19
CSDE1-211ENST00000525970 H0Y9P7 68 aa1.37□□□□□ -2.19
CSDE1-211ENST00000525970 ELOF1P60002 83 aaKnown RBP1.37□□□□□ -2.19
CSDE1-211ENST00000525970 C9orf116Q5BN46 136 aaPredicted RBP1.37□□□□□ -2.19
CSDE1-211ENST00000525970 Q5VV11 94 aa1.37□□□□□ -2.19
CSDE1-211ENST00000525970 WFDC10BQ8IUB3 73 aa1.37□□□□□ -2.19
CSDE1-211ENST00000525970 WFDC13Q8IUB5 93 aa1.37□□□□□ -2.19
CSDE1-211ENST00000525970 NOP10Q9NPE3 64 aaKnown RBP1.37□□□□□ -2.19
CSDE1-211ENST00000525970 A0A096LPF7 62 aa1.36□□□□□ -2.19
CSDE1-211ENST00000525970 LOC101927531A0A1B0GV80 90 aa1.36□□□□□ -2.19
CSDE1-211ENST00000525970 DEFB130BP0DP73 79 aa1.36□□□□□ -2.19
CSDE1-211ENST00000525970 DEFB130AP0DP74 79 aa1.36□□□□□ -2.19
CSDE1-211ENST00000525970 DNAH12Q6ZR08 3092 aa1.36□□□□□ -2.19
CSDE1-211ENST00000525970 SRCAPQ6ZRS2 3230 aa1.36□□□□□ -2.19
CSDE1-211ENST00000525970 DNAJC13O75165 2243 aa1.36□□□□□ -2.19
CSDE1-211ENST00000525970 F5P12259 2224 aa1.35□□□□□ -2.19
CSDE1-211ENST00000525970 KIAA0100Q14667 2235 aaKnown RBP1.35□□□□□ -2.19
CSDE1-211ENST00000525970 KLK9Q2XQG4 91 aa1.35□□□□□ -2.19
CSDE1-211ENST00000525970 DEFB136Q30KP8 78 aa1.35□□□□□ -2.19
CSDE1-211ENST00000525970 DEFB114Q30KQ6 69 aa1.35□□□□□ -2.19
CSDE1-211ENST00000525970 SPAG11AQ6PDA7 123 aa1.35□□□□□ -2.19
CSDE1-211ENST00000525970 DEFB124Q8NES8 71 aa1.35□□□□□ -2.19
CSDE1-211ENST00000525970 DMAC1Q96GE9 116 aa1.35□□□□□ -2.19
CSDE1-211ENST00000525970 PCNTO95613 3336 aa1.34□□□□□ -2.19
CSDE1-211ENST00000525970 A0A096LNT2 108 aa1.34□□□□□ -2.19
CSDE1-211ENST00000525970 K7EQZ3 153 aa1.34□□□□□ -2.19
CSDE1-211ENST00000525970 HTN3P15516 51 aa1.34□□□□□ -2.19
CSDE1-211ENST00000525970 WDR87Q6ZQQ6 2873 aa1.33□□□□□ -2.2
CSDE1-211ENST00000525970 EP400Q96L91 3159 aa1.33□□□□□ -2.2
CSDE1-211ENST00000525970 KNL1Q8NG31 2342 aa1.33□□□□□ -2.2
CSDE1-211ENST00000525970 FBN3Q75N90 2809 aa1.33□□□□□ -2.2
CSDE1-211ENST00000525970 NBDYA0A0U1RRE5 68 aa1.33□□□□□ -2.2
CSDE1-211ENST00000525970 CCL19Q99731 98 aa1.33□□□□□ -2.2
CSDE1-211ENST00000525970 CENPFP49454 3210 aa1.32□□□□□ -2.2
CSDE1-211ENST00000525970 LCE6AA0A183 80 aa1.32□□□□□ -2.2
CSDE1-211ENST00000525970 A0A1B0GU69 56 aa1.32□□□□□ -2.2
CSDE1-211ENST00000525970 SPINK7P58062 85 aa1.32□□□□□ -2.2
CSDE1-211ENST00000525970 C10orf99Q6UWK7 81 aa1.32□□□□□ -2.2
CSDE1-211ENST00000525970 KCNQ1DNQ9H478 68 aa1.32□□□□□ -2.2
CSDE1-211ENST00000525970 PRO0255Q9UI72 69 aa1.32□□□□□ -2.2
CSDE1-211ENST00000525970 LINC01558Q9Y6Z2 57 aa1.32□□□□□ -2.2
CSDE1-211ENST00000525970 C6orf48Q9UBA6 75 aa1.31□□□□□ -2.2
CSDE1-211ENST00000525970 KMT2BQ9UMN6 2715 aaPredicted RBP1.31□□□□□ -2.2
CSDE1-211ENST00000525970 GOLGB1Q14789 3259 aaKnown RBP1.3□□□□□ -2.2
CSDE1-211ENST00000525970 GVQW2A0A096LPI5 108 aaPredicted RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms