RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 FAM19A5Q7Z5A7 132 aaPredicted RBP9.56□□□□□ -0.88
VCAN-211ENST00000513984 JMJD7-PLA2G4BH0Y9G9 81 aa9.55□□□□□ -0.88
VCAN-211ENST00000513984 MRPL55Q7Z7F7 128 aaKnown RBP9.55□□□□□ -0.88
VCAN-211ENST00000513984 C14orf132Q9NPU4 83 aa9.55□□□□□ -0.88
VCAN-211ENST00000513984 M0R2N4 97 aa9.54□□□□□ -0.88
VCAN-211ENST00000513984 Q6ZR54 194 aa9.54□□□□□ -0.88
VCAN-211ENST00000513984 SPRR1AP35321 89 aa9.54□□□□□ -0.88
VCAN-211ENST00000513984 C9orf163Q8N9P6 203 aa9.54□□□□□ -0.88
VCAN-211ENST00000513984 RPL37AP8A6NKH3 93 aa9.53□□□□□ -0.88
VCAN-211ENST00000513984 KRTAP4-16G5E9R7 235 aaPredicted RBP9.53□□□□□ -0.88
VCAN-211ENST00000513984 PKIGQ9Y2B9 76 aa9.53□□□□□ -0.88
VCAN-211ENST00000513984 MT-ATP8P03928 68 aa9.52□□□□□ -0.89
VCAN-211ENST00000513984 IGKV2-24A0A0C4DH68 120 aa9.52□□□□□ -0.89
VCAN-211ENST00000513984 GHRHP01286 108 aa9.52□□□□□ -0.89
VCAN-211ENST00000513984 GAGE2AQ6NT46 116 aa9.51□□□□□ -0.89
VCAN-211ENST00000513984 Q6ZRX8 168 aa9.5□□□□□ -0.89
VCAN-211ENST00000513984 A0A1W2PNN7 141 aa9.49□□□□□ -0.89
VCAN-211ENST00000513984 A0A1B0GV72 72 aa9.49□□□□□ -0.89
VCAN-211ENST00000513984 B5MCH6 92 aa9.49□□□□□ -0.89
VCAN-211ENST00000513984 SDIM1Q6ZPB5 146 aa9.49□□□□□ -0.89
VCAN-211ENST00000513984 WWC2-AS2Q96NR7 200 aa9.49□□□□□ -0.89
VCAN-211ENST00000513984 A0A087WTM6 91 aa9.48□□□□□ -0.89
VCAN-211ENST00000513984 KMT2AQ03164 3969 aa9.47□□□□□ -0.89
VCAN-211ENST00000513984 ETDCA0A1B0GVM5 59 aa9.47□□□□□ -0.89
VCAN-211ENST00000513984 SCGB1A1P11684 91 aa9.47□□□□□ -0.89
VCAN-211ENST00000513984 PCP4P48539 62 aa9.47□□□□□ -0.89
VCAN-211ENST00000513984 DHRS4-AS1Q9P1J3 65 aa9.47□□□□□ -0.89
VCAN-211ENST00000513984 DNAH6Q9C0G6 4158 aa9.47□□□□□ -0.89
VCAN-211ENST00000513984 CCKP06307 115 aa9.47□□□□□ -0.89
VCAN-211ENST00000513984 LAMTOR3Q9UHA4 124 aa9.47□□□□□ -0.89
VCAN-211ENST00000513984 CHTF8P0CG12 524 aa9.46□□□□□ -0.9
VCAN-211ENST00000513984 RBM3P98179 157 aaKnown RBP9.46□□□□□ -0.9
VCAN-211ENST00000513984 REG3GQ6UW15 175 aa9.46□□□□□ -0.9
VCAN-211ENST00000513984 Q9BRP9 147 aa9.45□□□□□ -0.9
VCAN-211ENST00000513984 LINC00474Q9P2X8 69 aa9.45□□□□□ -0.9
VCAN-211ENST00000513984 SMCR5Q8TEV8 140 aa9.45□□□□□ -0.9
VCAN-211ENST00000513984 LOC110117498A0A087WWA1 95 aa9.44□□□□□ -0.9
VCAN-211ENST00000513984 TGP01266 2768 aa9.43□□□□□ -0.9
VCAN-211ENST00000513984 DNAH2Q9P225 4427 aa9.42□□□□□ -0.9
VCAN-211ENST00000513984 LY6G6CO95867 125 aa9.42□□□□□ -0.9
VCAN-211ENST00000513984 C1orf134Q5TEV5 83 aa9.42□□□□□ -0.9
VCAN-211ENST00000513984 LINC00476Q8WZB0 136 aa9.42□□□□□ -0.9
VCAN-211ENST00000513984 Q6ZQT0 140 aa9.42□□□□□ -0.9
VCAN-211ENST00000513984 LINC00643Q86TS7 51 aa9.42□□□□□ -0.9
VCAN-211ENST00000513984 NDUFV3P56181 108 aaKnown RBP9.41□□□□□ -0.9
VCAN-211ENST00000513984 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
VCAN-211ENST00000513984 LINC01547P58512 204 aaPredicted RBP9.4□□□□□ -0.9
VCAN-211ENST00000513984 PDE6GP18545 87 aa9.4□□□□□ -0.91
VCAN-211ENST00000513984 PHF5AQ7RTV0 110 aaKnown RBP9.4□□□□□ -0.91
VCAN-211ENST00000513984 DSCR8Q96T75 97 aa9.4□□□□□ -0.91
VCAN-211ENST00000513984 LINC00846Q9NV44 126 aa9.4□□□□□ -0.91
VCAN-211ENST00000513984 ALMS1Q8TCU4 4167 aa9.39□□□□□ -0.91
VCAN-211ENST00000513984 TRBV7-4A0A0J9YYF1 115 aa9.39□□□□□ -0.91
VCAN-211ENST00000513984 PANO1I0J062 215 aa9.39□□□□□ -0.91
VCAN-211ENST00000513984 Q6Q795 121 aa9.39□□□□□ -0.91
VCAN-211ENST00000513984 Q8N377 158 aa9.39□□□□□ -0.91
VCAN-211ENST00000513984 RTL8CO15255 209 aa9.38□□□□□ -0.91
VCAN-211ENST00000513984 SPACA4Q8TDM5 124 aa9.38□□□□□ -0.91
VCAN-211ENST00000513984 IGLV5-48A0A075B6I7 105 aa9.38□□□□□ -0.91
VCAN-211ENST00000513984 TRBV7-7A0A0K0K1E9 115 aa9.38□□□□□ -0.91
VCAN-211ENST00000513984 EPM2AB3EWF7 344 aa9.38□□□□□ -0.91
VCAN-211ENST00000513984 UBE2BP63146 152 aa9.38□□□□□ -0.91
VCAN-211ENST00000513984 C3orf84H3BNL1 204 aa9.37□□□□□ -0.91
VCAN-211ENST00000513984 ERC2-IT1O76042 136 aa9.36□□□□□ -0.91
VCAN-211ENST00000513984 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
VCAN-211ENST00000513984 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.36□□□□□ -0.91
VCAN-211ENST00000513984 HECTD4Q9Y4D8 3996 aa9.36□□□□□ -0.91
VCAN-211ENST00000513984 FAM19A1Q7Z5A9 133 aa9.35□□□□□ -0.91
VCAN-211ENST00000513984 DEFB105AQ8NG35 78 aa9.35□□□□□ -0.91
VCAN-211ENST00000513984 C21orf62-AS1Q17RA5 79 aa9.35□□□□□ -0.91
VCAN-211ENST00000513984 ST20-AS1Q8NBB2 130 aa9.35□□□□□ -0.91
VCAN-211ENST00000513984 IMUPQ9GZP8 106 aa9.33□□□□□ -0.92
VCAN-211ENST00000513984 H0Y9J4 135 aa9.33□□□□□ -0.92
VCAN-211ENST00000513984 PRLHP81277 87 aa9.33□□□□□ -0.92
VCAN-211ENST00000513984 FUSP35637 526 aaKnown RBP eCLIP9.32□□□□□ -0.92
VCAN-211ENST00000513984 Q6JHZ5 121 aa9.32□□□□□ -0.92
VCAN-211ENST00000513984 SVIPQ8NHG7 77 aa9.32□□□□□ -0.92
VCAN-211ENST00000513984 LCE2DQ5TA82 110 aaPredicted RBP9.31□□□□□ -0.92
VCAN-211ENST00000513984 IGLV5-52A0A0A0MRZ9 124 aa9.31□□□□□ -0.92
VCAN-211ENST00000513984 TNP2Q05952 138 aa9.31□□□□□ -0.92
VCAN-211ENST00000513984 DPH3Q96FX2 82 aa9.31□□□□□ -0.92
VCAN-211ENST00000513984 C3orf22Q8N5N4 141 aa9.29□□□□□ -0.92
VCAN-211ENST00000513984 UBL5Q9BZL1 73 aa9.29□□□□□ -0.92
VCAN-211ENST00000513984 FRAS1Q86XX4 4008 aa9.29□□□□□ -0.92
VCAN-211ENST00000513984 HIGD2AQ9BW72 106 aa9.28□□□□□ -0.92
VCAN-211ENST00000513984 BCE1O60756 84 aa9.27□□□□□ -0.93
VCAN-211ENST00000513984 PLAC8Q9NZF1 115 aa9.27□□□□□ -0.93
VCAN-211ENST00000513984 ATP5EP2Q5VTU8 51 aa9.26□□□□□ -0.93
VCAN-211ENST00000513984 SMIM29Q86T20 159 aa9.26□□□□□ -0.93
VCAN-211ENST00000513984 KRTAP13-1Q8IUC0 172 aa9.26□□□□□ -0.93
VCAN-211ENST00000513984 UBE2AP49459 152 aa9.25□□□□□ -0.93
VCAN-211ENST00000513984 IGKV3D-7A0A0C4DH55 119 aa9.24□□□□□ -0.93
VCAN-211ENST00000513984 Q6ZVQ6 151 aa9.24□□□□□ -0.93
VCAN-211ENST00000513984 SPRR1BP22528 89 aa9.22□□□□□ -0.93
VCAN-211ENST00000513984 C1orf137Q5JT78 98 aa9.22□□□□□ -0.93
VCAN-211ENST00000513984 DNAH11Q96DT5 4516 aa9.21□□□□□ -0.93
VCAN-211ENST00000513984 HYDINQ4G0P3 5121 aa9.21□□□□□ -0.93
VCAN-211ENST00000513984 DNAH8Q96JB1 4490 aa9.21□□□□□ -0.94
VCAN-211ENST00000513984 A0A1B0GW54 56 aa9.2□□□□□ -0.94
VCAN-211ENST00000513984 F8WEM9 126 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms