RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 MRPL55Q7Z7F7 128 aaKnown RBP11.62□□□□□ -0.55
LINC00535-201ENST00000501400 C9orf163Q8N9P6 203 aa11.62□□□□□ -0.55
LINC00535-201ENST00000501400 WWC2-AS2Q96NR7 200 aa11.6□□□□□ -0.55
LINC00535-201ENST00000501400 A0A1W2PNN7 141 aa11.6□□□□□ -0.55
LINC00535-201ENST00000501400 KRTAP4-16G5E9R7 235 aaPredicted RBP11.6□□□□□ -0.55
LINC00535-201ENST00000501400 TMEM256-PLSCR3K7ERE1 68 aa11.6□□□□□ -0.55
LINC00535-201ENST00000501400 PRYO14603 147 aa11.6□□□□□ -0.55
LINC00535-201ENST00000501400 INAFM2P0DMQ5 153 aa11.6□□□□□ -0.55
LINC00535-201ENST00000501400 FAM240AA0A1B0GVK7 77 aa11.59□□□□□ -0.55
LINC00535-201ENST00000501400 CHTF8P0CG12 524 aa11.59□□□□□ -0.55
LINC00535-201ENST00000501400 SPRR1AP35321 89 aa11.59□□□□□ -0.55
LINC00535-201ENST00000501400 ALMS1Q8TCU4 4167 aa11.59□□□□□ -0.55
LINC00535-201ENST00000501400 DNAH17Q9UFH2 4485 aa11.59□□□□□ -0.55
LINC00535-201ENST00000501400 C14orf132Q9NPU4 83 aa11.58□□□□□ -0.55
LINC00535-201ENST00000501400 A0A087WTM6 91 aa11.58□□□□□ -0.56
LINC00535-201ENST00000501400 A0A1B0GV72 72 aa11.57□□□□□ -0.56
LINC00535-201ENST00000501400 XGP55808 180 aa11.56□□□□□ -0.56
LINC00535-201ENST00000501400 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.56□□□□□ -0.56
LINC00535-201ENST00000501400 HECTD4Q9Y4D8 3996 aa11.56□□□□□ -0.56
LINC00535-201ENST00000501400 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
LINC00535-201ENST00000501400 LY6G6CO95867 125 aa11.55□□□□□ -0.56
LINC00535-201ENST00000501400 LINC00476Q8WZB0 136 aa11.55□□□□□ -0.56
LINC00535-201ENST00000501400 B5MCH6 92 aa11.54□□□□□ -0.56
LINC00535-201ENST00000501400 SIGMAR1Q99720 223 aa11.54□□□□□ -0.56
LINC00535-201ENST00000501400 Q6ZRX8 168 aa11.53□□□□□ -0.56
LINC00535-201ENST00000501400 PANO1I0J062 215 aa11.52□□□□□ -0.56
LINC00535-201ENST00000501400 JMJD7-PLA2G4BH0Y9G9 81 aa11.52□□□□□ -0.57
LINC00535-201ENST00000501400 MT-ATP8P03928 68 aa11.52□□□□□ -0.57
LINC00535-201ENST00000501400 Q9BRP9 147 aa11.52□□□□□ -0.57
LINC00535-201ENST00000501400 GAGE2AQ6NT46 116 aa11.5□□□□□ -0.57
LINC00535-201ENST00000501400 FUSP35637 526 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC00535-201ENST00000501400 C1orf134Q5TEV5 83 aa11.5□□□□□ -0.57
LINC00535-201ENST00000501400 PKIGQ9Y2B9 76 aa11.5□□□□□ -0.57
LINC00535-201ENST00000501400 ETDCA0A1B0GVM5 59 aa11.49□□□□□ -0.57
LINC00535-201ENST00000501400 ACYP1P07311 99 aa11.49□□□□□ -0.57
LINC00535-201ENST00000501400 REG3GQ6UW15 175 aa11.49□□□□□ -0.57
LINC00535-201ENST00000501400 H3BQ85 93 aa11.48□□□□□ -0.57
LINC00535-201ENST00000501400 FRAS1Q86XX4 4008 aa11.48□□□□□ -0.57
LINC00535-201ENST00000501400 PHF5AQ7RTV0 110 aaKnown RBP11.47□□□□□ -0.57
LINC00535-201ENST00000501400 KRTAP11-1Q8IUC1 163 aa11.47□□□□□ -0.57
LINC00535-201ENST00000501400 SMCR5Q8TEV8 140 aa11.47□□□□□ -0.57
LINC00535-201ENST00000501400 LAMTOR3Q9UHA4 124 aa11.47□□□□□ -0.57
LINC00535-201ENST00000501400 DHRS4-AS1Q9P1J3 65 aa11.46□□□□□ -0.58
LINC00535-201ENST00000501400 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.46□□□□□ -0.58
LINC00535-201ENST00000501400 RTL8CO15255 209 aa11.45□□□□□ -0.58
LINC00535-201ENST00000501400 SPACA4Q8TDM5 124 aa11.45□□□□□ -0.58
LINC00535-201ENST00000501400 LINC00474Q9P2X8 69 aa11.45□□□□□ -0.58
LINC00535-201ENST00000501400 C3orf84H3BNL1 204 aa11.44□□□□□ -0.58
LINC00535-201ENST00000501400 CCKP06307 115 aa11.44□□□□□ -0.58
LINC00535-201ENST00000501400 LINC01547P58512 204 aaPredicted RBP11.44□□□□□ -0.58
LINC00535-201ENST00000501400 RBM3P98179 157 aaKnown RBP11.43□□□□□ -0.58
LINC00535-201ENST00000501400 ERC2-IT1O76042 136 aa11.43□□□□□ -0.58
LINC00535-201ENST00000501400 GHRHP01286 108 aa11.43□□□□□ -0.58
LINC00535-201ENST00000501400 HYDINQ4G0P3 5121 aa11.42□□□□□ -0.58
LINC00535-201ENST00000501400 DNAH11Q96DT5 4516 aa11.41□□□□□ -0.58
LINC00535-201ENST00000501400 LOC110117498A0A087WWA1 95 aa11.41□□□□□ -0.58
LINC00535-201ENST00000501400 EPM2AB3EWF7 344 aa11.41□□□□□ -0.58
LINC00535-201ENST00000501400 NDUFV3P56181 108 aaKnown RBP11.41□□□□□ -0.58
LINC00535-201ENST00000501400 Q6ZQT0 140 aa11.41□□□□□ -0.58
LINC00535-201ENST00000501400 Q8N377 158 aa11.41□□□□□ -0.58
LINC00535-201ENST00000501400 TNP2Q05952 138 aa11.41□□□□□ -0.58
LINC00535-201ENST00000501400 UBE2BP63146 152 aa11.4□□□□□ -0.58
LINC00535-201ENST00000501400 ST20-AS1Q8NBB2 130 aa11.4□□□□□ -0.58
LINC00535-201ENST00000501400 LINC00846Q9NV44 126 aa11.39□□□□□ -0.59
LINC00535-201ENST00000501400 PRLHP81277 87 aa11.39□□□□□ -0.59
LINC00535-201ENST00000501400 IGLV5-48A0A075B6I7 105 aa11.38□□□□□ -0.59
LINC00535-201ENST00000501400 TRBV7-4A0A0J9YYF1 115 aa11.38□□□□□ -0.59
LINC00535-201ENST00000501400 FAM19A1Q7Z5A9 133 aa11.38□□□□□ -0.59
LINC00535-201ENST00000501400 DEFB105AQ8NG35 78 aa11.38□□□□□ -0.59
LINC00535-201ENST00000501400 DNAH5Q8TE73 4624 aa11.37□□□□□ -0.59
LINC00535-201ENST00000501400 PCP4P48539 62 aa11.37□□□□□ -0.59
LINC00535-201ENST00000501400 DNAH8Q96JB1 4490 aa11.36□□□□□ -0.59
LINC00535-201ENST00000501400 FAT2Q9NYQ8 4349 aa11.36□□□□□ -0.59
LINC00535-201ENST00000501400 IGLV5-52A0A0A0MRZ9 124 aa11.36□□□□□ -0.59
LINC00535-201ENST00000501400 DSCR8Q96T75 97 aa11.36□□□□□ -0.59
LINC00535-201ENST00000501400 SCGB1A1P11684 91 aa11.35□□□□□ -0.59
LINC00535-201ENST00000501400 LINC00643Q86TS7 51 aa11.35□□□□□ -0.59
LINC00535-201ENST00000501400 C3orf22Q8N5N4 141 aa11.34□□□□□ -0.59
LINC00535-201ENST00000501400 SACSQ9NZJ4 4579 aa11.33□□□□□ -0.6
LINC00535-201ENST00000501400 DPH3Q96FX2 82 aa11.33□□□□□ -0.6
LINC00535-201ENST00000501400 PDE6GP18545 87 aa11.31□□□□□ -0.6
LINC00535-201ENST00000501400 TRBV7-7A0A0K0K1E9 115 aa11.3□□□□□ -0.6
LINC00535-201ENST00000501400 H0Y9J4 135 aa11.3□□□□□ -0.6
LINC00535-201ENST00000501400 KRTAP10-2P60368 255 aa11.3□□□□□ -0.6
LINC00535-201ENST00000501400 HIGD2AQ9BW72 106 aa11.3□□□□□ -0.6
LINC00535-201ENST00000501400 PKD1P98161 4303 aa11.3□□□□□ -0.6
LINC00535-201ENST00000501400 PLAC8Q9NZF1 115 aa11.29□□□□□ -0.6
LINC00535-201ENST00000501400 Q6Q795 121 aa11.28□□□□□ -0.6
LINC00535-201ENST00000501400 KRTAP13-1Q8IUC0 172 aa11.28□□□□□ -0.6
LINC00535-201ENST00000501400 BCE1O60756 84 aa11.27□□□□□ -0.6
LINC00535-201ENST00000501400 SMIM29Q86T20 159 aa11.27□□□□□ -0.6
LINC00535-201ENST00000501400 SRRM2Q9UQ35 2752 aaKnown RBP11.27□□□□□ -0.61
LINC00535-201ENST00000501400 C21orf62-AS1Q17RA5 79 aa11.27□□□□□ -0.61
LINC00535-201ENST00000501400 Q6JHZ5 121 aa11.25□□□□□ -0.61
LINC00535-201ENST00000501400 UBE2AP49459 152 aa11.24□□□□□ -0.61
LINC00535-201ENST00000501400 IMUPQ9GZP8 106 aa11.21□□□□□ -0.61
LINC00535-201ENST00000501400 IGKV3D-7A0A0C4DH55 119 aa11.21□□□□□ -0.62
LINC00535-201ENST00000501400 UBL5Q9BZL1 73 aa11.21□□□□□ -0.62
LINC00535-201ENST00000501400 PSORS1C2Q9UIG4 136 aa11.2□□□□□ -0.62
LINC00535-201ENST00000501400 FAM30AQ9NZY2 134 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms