RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 Q6ZR54 194 aa10.55□□□□□ -0.72
ATG4B-225ENST00000494465 INAFM2P0DMQ5 153 aa10.55□□□□□ -0.72
ATG4B-225ENST00000494465 FAM240AA0A1B0GVK7 77 aa10.54□□□□□ -0.72
ATG4B-225ENST00000494465 RPL37AP8A6NKH3 93 aa10.54□□□□□ -0.72
ATG4B-225ENST00000494465 Q6ZQY7 126 aa10.54□□□□□ -0.72
ATG4B-225ENST00000494465 SIGMAR1Q99720 223 aa10.54□□□□□ -0.72
ATG4B-225ENST00000494465 MRPL55Q7Z7F7 128 aaKnown RBP10.53□□□□□ -0.72
ATG4B-225ENST00000494465 XGP55808 180 aa10.53□□□□□ -0.72
ATG4B-225ENST00000494465 C9orf163Q8N9P6 203 aa10.53□□□□□ -0.72
ATG4B-225ENST00000494465 IGKV2-24A0A0C4DH68 120 aa10.52□□□□□ -0.73
ATG4B-225ENST00000494465 KRTAP4-16G5E9R7 235 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-225ENST00000494465 C14orf132Q9NPU4 83 aa10.52□□□□□ -0.73
ATG4B-225ENST00000494465 SPRR1AP35321 89 aa10.52□□□□□ -0.73
ATG4B-225ENST00000494465 A0A1W2PNN7 141 aa10.51□□□□□ -0.73
ATG4B-225ENST00000494465 PRYO14603 147 aa10.51□□□□□ -0.73
ATG4B-225ENST00000494465 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.51□□□□□ -0.73
ATG4B-225ENST00000494465 A0A1B0GV72 72 aa10.5□□□□□ -0.73
ATG4B-225ENST00000494465 DNAH6Q9C0G6 4158 aa10.49□□□□□ -0.73
ATG4B-225ENST00000494465 SCGB1A1P11684 91 aa10.49□□□□□ -0.73
ATG4B-225ENST00000494465 MT-ATP8P03928 68 aa10.48□□□□□ -0.73
ATG4B-225ENST00000494465 CHTF8P0CG12 524 aa10.48□□□□□ -0.73
ATG4B-225ENST00000494465 A0A087WTM6 91 aa10.48□□□□□ -0.73
ATG4B-225ENST00000494465 SDIM1Q6ZPB5 146 aa10.48□□□□□ -0.73
ATG4B-225ENST00000494465 WWC2-AS2Q96NR7 200 aa10.48□□□□□ -0.73
ATG4B-225ENST00000494465 JMJD7-PLA2G4BH0Y9G9 81 aa10.47□□□□□ -0.73
ATG4B-225ENST00000494465 B5MCH6 92 aa10.47□□□□□ -0.73
ATG4B-225ENST00000494465 ACYP1P07311 99 aa10.47□□□□□ -0.73
ATG4B-225ENST00000494465 HECTD4Q9Y4D8 3996 aa10.47□□□□□ -0.73
ATG4B-225ENST00000494465 Q6ZRX8 168 aa10.46□□□□□ -0.73
ATG4B-225ENST00000494465 GAGE2AQ6NT46 116 aa10.46□□□□□ -0.74
ATG4B-225ENST00000494465 DNAH17Q9UFH2 4485 aa10.45□□□□□ -0.74
ATG4B-225ENST00000494465 H3BQ85 93 aa10.45□□□□□ -0.74
ATG4B-225ENST00000494465 Q9BRP9 147 aa10.45□□□□□ -0.74
ATG4B-225ENST00000494465 LY6G6CO95867 125 aa10.44□□□□□ -0.74
ATG4B-225ENST00000494465 ETDCA0A1B0GVM5 59 aa10.43□□□□□ -0.74
ATG4B-225ENST00000494465 PANO1I0J062 215 aa10.43□□□□□ -0.74
ATG4B-225ENST00000494465 SMCR5Q8TEV8 140 aa10.43□□□□□ -0.74
ATG4B-225ENST00000494465 LINC00476Q8WZB0 136 aa10.43□□□□□ -0.74
ATG4B-225ENST00000494465 ALMS1Q8TCU4 4167 aa10.42□□□□□ -0.74
ATG4B-225ENST00000494465 REG3GQ6UW15 175 aa10.42□□□□□ -0.74
ATG4B-225ENST00000494465 LAMTOR3Q9UHA4 124 aa10.41□□□□□ -0.74
ATG4B-225ENST00000494465 PKIGQ9Y2B9 76 aa10.41□□□□□ -0.74
ATG4B-225ENST00000494465 CCKP06307 115 aa10.41□□□□□ -0.74
ATG4B-225ENST00000494465 DHRS4-AS1Q9P1J3 65 aa10.41□□□□□ -0.74
ATG4B-225ENST00000494465 C1orf134Q5TEV5 83 aa10.4□□□□□ -0.74
ATG4B-225ENST00000494465 FUSP35637 526 aaKnown RBP eCLIP10.4□□□□□ -0.74
ATG4B-225ENST00000494465 RBM3P98179 157 aaKnown RBP10.4□□□□□ -0.74
ATG4B-225ENST00000494465 GHRHP01286 108 aa10.39□□□□□ -0.75
ATG4B-225ENST00000494465 PHF5AQ7RTV0 110 aaKnown RBP10.39□□□□□ -0.75
ATG4B-225ENST00000494465 KRTAP11-1Q8IUC1 163 aa10.39□□□□□ -0.75
ATG4B-225ENST00000494465 LINC01547P58512 204 aaPredicted RBP10.39□□□□□ -0.75
ATG4B-225ENST00000494465 LINC00474Q9P2X8 69 aa10.39□□□□□ -0.75
ATG4B-225ENST00000494465 LOC110117498A0A087WWA1 95 aa10.38□□□□□ -0.75
ATG4B-225ENST00000494465 NDUFV3P56181 108 aaKnown RBP10.37□□□□□ -0.75
ATG4B-225ENST00000494465 Q6ZQT0 140 aa10.37□□□□□ -0.75
ATG4B-225ENST00000494465 FRAS1Q86XX4 4008 aa10.37□□□□□ -0.75
ATG4B-225ENST00000494465 ERC2-IT1O76042 136 aa10.37□□□□□ -0.75
ATG4B-225ENST00000494465 Q8N377 158 aa10.37□□□□□ -0.75
ATG4B-225ENST00000494465 LINC00846Q9NV44 126 aa10.37□□□□□ -0.75
ATG4B-225ENST00000494465 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.37□□□□□ -0.75
ATG4B-225ENST00000494465 RTL8CO15255 209 aa10.36□□□□□ -0.75
ATG4B-225ENST00000494465 SPACA4Q8TDM5 124 aa10.36□□□□□ -0.75
ATG4B-225ENST00000494465 EPM2AB3EWF7 344 aa10.35□□□□□ -0.75
ATG4B-225ENST00000494465 ST20-AS1Q8NBB2 130 aa10.34□□□□□ -0.75
ATG4B-225ENST00000494465 TRBV7-4A0A0J9YYF1 115 aa10.33□□□□□ -0.76
ATG4B-225ENST00000494465 C3orf84H3BNL1 204 aa10.33□□□□□ -0.76
ATG4B-225ENST00000494465 UBE2BP63146 152 aa10.33□□□□□ -0.76
ATG4B-225ENST00000494465 LINC00643Q86TS7 51 aa10.33□□□□□ -0.76
ATG4B-225ENST00000494465 DEFB105AQ8NG35 78 aa10.33□□□□□ -0.76
ATG4B-225ENST00000494465 HYDINQ4G0P3 5121 aa10.33□□□□□ -0.76
ATG4B-225ENST00000494465 DSCR8Q96T75 97 aa10.33□□□□□ -0.76
ATG4B-225ENST00000494465 IGLV5-48A0A075B6I7 105 aa10.32□□□□□ -0.76
ATG4B-225ENST00000494465 PRLHP81277 87 aa10.31□□□□□ -0.76
ATG4B-225ENST00000494465 TNP2Q05952 138 aa10.31□□□□□ -0.76
ATG4B-225ENST00000494465 FAM19A1Q7Z5A9 133 aa10.31□□□□□ -0.76
ATG4B-225ENST00000494465 DNAH11Q96DT5 4516 aa10.3□□□□□ -0.76
ATG4B-225ENST00000494465 PDE6GP18545 87 aa10.3□□□□□ -0.76
ATG4B-225ENST00000494465 TRBV7-7A0A0K0K1E9 115 aa10.29□□□□□ -0.76
ATG4B-225ENST00000494465 DPH3Q96FX2 82 aa10.29□□□□□ -0.76
ATG4B-225ENST00000494465 Q6Q795 121 aa10.28□□□□□ -0.76
ATG4B-225ENST00000494465 C3orf22Q8N5N4 141 aa10.28□□□□□ -0.76
ATG4B-225ENST00000494465 IGLV5-52A0A0A0MRZ9 124 aa10.28□□□□□ -0.76
ATG4B-225ENST00000494465 DNAH8Q96JB1 4490 aa10.27□□□□□ -0.76
ATG4B-225ENST00000494465 DNAH5Q8TE73 4624 aa10.27□□□□□ -0.77
ATG4B-225ENST00000494465 H0Y9J4 135 aa10.26□□□□□ -0.77
ATG4B-225ENST00000494465 FAT2Q9NYQ8 4349 aa10.25□□□□□ -0.77
ATG4B-225ENST00000494465 HIGD2AQ9BW72 106 aa10.24□□□□□ -0.77
ATG4B-225ENST00000494465 SMIM29Q86T20 159 aa10.23□□□□□ -0.77
ATG4B-225ENST00000494465 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
ATG4B-225ENST00000494465 Q6JHZ5 121 aa10.23□□□□□ -0.77
ATG4B-225ENST00000494465 IMUPQ9GZP8 106 aa10.23□□□□□ -0.77
ATG4B-225ENST00000494465 BCE1O60756 84 aa10.22□□□□□ -0.77
ATG4B-225ENST00000494465 KRTAP13-1Q8IUC0 172 aa10.22□□□□□ -0.77
ATG4B-225ENST00000494465 SRRM2Q9UQ35 2752 aaKnown RBP10.22□□□□□ -0.77
ATG4B-225ENST00000494465 KRTAP10-2P60368 255 aa10.22□□□□□ -0.77
ATG4B-225ENST00000494465 PKD1P98161 4303 aa10.21□□□□□ -0.77
ATG4B-225ENST00000494465 SACSQ9NZJ4 4579 aa10.2□□□□□ -0.78
ATG4B-225ENST00000494465 IGKV3D-7A0A0C4DH55 119 aa10.19□□□□□ -0.78
ATG4B-225ENST00000494465 UBE2AP49459 152 aa10.19□□□□□ -0.78
ATG4B-225ENST00000494465 UBL5Q9BZL1 73 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms