RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 OBSCN-AS1Q96MR7 158 aa9.03□□□□□ -0.96
PTPN7-216ENST00000492977 LYSTQ99698 3801 aa9.03□□□□□ -0.96
PTPN7-216ENST00000492977 FAM240AA0A1B0GVK7 77 aa9.02□□□□□ -0.97
PTPN7-216ENST00000492977 FAM168BA1KXE4 195 aa9.02□□□□□ -0.97
PTPN7-216ENST00000492977 PKIGQ9Y2B9 76 aa9.01□□□□□ -0.97
PTPN7-216ENST00000492977 KRTAP7-1Q8IUC3 87 aa9□□□□□ -0.97
PTPN7-216ENST00000492977 IGLV1-50A0A075B6I6 118 aa8.99□□□□□ -0.97
PTPN7-216ENST00000492977 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.99□□□□□ -0.97
PTPN7-216ENST00000492977 M0R2N4 97 aa8.99□□□□□ -0.97
PTPN7-216ENST00000492977 A0A096LNI7 61 aa8.99□□□□□ -0.97
PTPN7-216ENST00000492977 PRYO14603 147 aa8.99□□□□□ -0.97
PTPN7-216ENST00000492977 ACYP1P07311 99 aa8.99□□□□□ -0.97
PTPN7-216ENST00000492977 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.99□□□□□ -0.97
PTPN7-216ENST00000492977 Q6ZR54 194 aa8.99□□□□□ -0.97
PTPN7-216ENST00000492977 FAM19A5Q7Z5A7 132 aaPredicted RBP8.99□□□□□ -0.97
PTPN7-216ENST00000492977 MRPL55Q7Z7F7 128 aaKnown RBP8.99□□□□□ -0.97
PTPN7-216ENST00000492977 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
PTPN7-216ENST00000492977 PLECQ15149 4684 aaKnown RBP8.98□□□□□ -0.97
PTPN7-216ENST00000492977 JMJD7-PLA2G4BH0Y9G9 81 aa8.98□□□□□ -0.97
PTPN7-216ENST00000492977 TENM2Q9NT68 2774 aa8.97□□□□□ -0.97
PTPN7-216ENST00000492977 Q6ZQY7 126 aa8.97□□□□□ -0.97
PTPN7-216ENST00000492977 WWC2-AS2Q96NR7 200 aa8.97□□□□□ -0.97
PTPN7-216ENST00000492977 RPL37AP8A6NKH3 93 aa8.96□□□□□ -0.97
PTPN7-216ENST00000492977 SPRR1AP35321 89 aa8.96□□□□□ -0.97
PTPN7-216ENST00000492977 STARD9Q9P2P6 4700 aa8.96□□□□□ -0.98
PTPN7-216ENST00000492977 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
PTPN7-216ENST00000492977 C14orf132Q9NPU4 83 aa8.95□□□□□ -0.98
PTPN7-216ENST00000492977 KRTAP4-16G5E9R7 235 aaPredicted RBP8.94□□□□□ -0.98
PTPN7-216ENST00000492977 A0A087WTM6 91 aa8.93□□□□□ -0.98
PTPN7-216ENST00000492977 XGP55808 180 aa8.93□□□□□ -0.98
PTPN7-216ENST00000492977 SDIM1Q6ZPB5 146 aa8.93□□□□□ -0.98
PTPN7-216ENST00000492977 LINC00474Q9P2X8 69 aa8.93□□□□□ -0.98
PTPN7-216ENST00000492977 ETDCA0A1B0GVM5 59 aa8.92□□□□□ -0.98
PTPN7-216ENST00000492977 A0A1W2PNN7 141 aa8.92□□□□□ -0.98
PTPN7-216ENST00000492977 GAGE2AQ6NT46 116 aa8.92□□□□□ -0.98
PTPN7-216ENST00000492977 Q6ZRX8 168 aa8.92□□□□□ -0.98
PTPN7-216ENST00000492977 DHRS4-AS1Q9P1J3 65 aa8.92□□□□□ -0.98
PTPN7-216ENST00000492977 B5MCH6 92 aa8.91□□□□□ -0.98
PTPN7-216ENST00000492977 FBN3Q75N90 2809 aa8.91□□□□□ -0.98
PTPN7-216ENST00000492977 VPS13DQ5THJ4 4388 aa8.91□□□□□ -0.98
PTPN7-216ENST00000492977 C1orf134Q5TEV5 83 aa8.9□□□□□ -0.98
PTPN7-216ENST00000492977 LAMTOR3Q9UHA4 124 aa8.9□□□□□ -0.98
PTPN7-216ENST00000492977 LY6G6CO95867 125 aa8.9□□□□□ -0.99
PTPN7-216ENST00000492977 MT-ATP8P03928 68 aa8.9□□□□□ -0.99
PTPN7-216ENST00000492977 RBM3P98179 157 aaKnown RBP8.9□□□□□ -0.99
PTPN7-216ENST00000492977 REG3GQ6UW15 175 aa8.9□□□□□ -0.99
PTPN7-216ENST00000492977 DNAH10Q8IVF4 4471 aa8.89□□□□□ -0.99
PTPN7-216ENST00000492977 CCKP06307 115 aa8.89□□□□□ -0.99
PTPN7-216ENST00000492977 CHTF8P0CG12 524 aa8.88□□□□□ -0.99
PTPN7-216ENST00000492977 LINC00476Q8WZB0 136 aa8.88□□□□□ -0.99
PTPN7-216ENST00000492977 C3orf84H3BNL1 204 aa8.87□□□□□ -0.99
PTPN7-216ENST00000492977 PLA2G1BP04054 148 aaKnown RBP8.87□□□□□ -0.99
PTPN7-216ENST00000492977 LOC110117498A0A087WWA1 95 aa8.86□□□□□ -0.99
PTPN7-216ENST00000492977 Q9BRP9 147 aa8.86□□□□□ -0.99
PTPN7-216ENST00000492977 PDE6GP18545 87 aa8.86□□□□□ -0.99
PTPN7-216ENST00000492977 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
PTPN7-216ENST00000492977 DSCR8Q96T75 97 aa8.85□□□□□ -0.99
PTPN7-216ENST00000492977 RTL8CO15255 209 aa8.83□□□□□ -1
PTPN7-216ENST00000492977 Q6ZQT0 140 aa8.83□□□□□ -1
PTPN7-216ENST00000492977 LINC00643Q86TS7 51 aa8.83□□□□□ -1
PTPN7-216ENST00000492977 EPM2AB3EWF7 344 aa8.82□□□□□ -1
PTPN7-216ENST00000492977 UBE2BP63146 152 aa8.82□□□□□ -1
PTPN7-216ENST00000492977 PHF5AQ7RTV0 110 aaKnown RBP8.82□□□□□ -1
PTPN7-216ENST00000492977 SPACA4Q8TDM5 124 aa8.82□□□□□ -1
PTPN7-216ENST00000492977 SMCR5Q8TEV8 140 aa8.82□□□□□ -1
PTPN7-216ENST00000492977 Q8N377 158 aa8.82□□□□□ -1
PTPN7-216ENST00000492977 DPH3Q96FX2 82 aa8.82□□□□□ -1
PTPN7-216ENST00000492977 TRBV7-4A0A0J9YYF1 115 aa8.81□□□□□ -1
PTPN7-216ENST00000492977 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
PTPN7-216ENST00000492977 LINC00846Q9NV44 126 aa8.81□□□□□ -1
PTPN7-216ENST00000492977 IGLV5-48A0A075B6I7 105 aa8.8□□□□□ -1
PTPN7-216ENST00000492977 PANO1I0J062 215 aa8.8□□□□□ -1
PTPN7-216ENST00000492977 FAM19A1Q7Z5A9 133 aa8.8□□□□□ -1
PTPN7-216ENST00000492977 DEFB105AQ8NG35 78 aa8.8□□□□□ -1
PTPN7-216ENST00000492977 KMT2AQ03164 3969 aa8.79□□□□□ -1
PTPN7-216ENST00000492977 Q6Q795 121 aa8.79□□□□□ -1
PTPN7-216ENST00000492977 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.79□□□□□ -1
PTPN7-216ENST00000492977 H0Y9J4 135 aa8.78□□□□□ -1
PTPN7-216ENST00000492977 ERC2-IT1O76042 136 aa8.78□□□□□ -1
PTPN7-216ENST00000492977 IGLV5-52A0A0A0MRZ9 124 aa8.78□□□□□ -1
PTPN7-216ENST00000492977 KRTAP11-1Q8IUC1 163 aa8.78□□□□□ -1
PTPN7-216ENST00000492977 TRBV7-7A0A0K0K1E9 115 aa8.77□□□□□ -1.01
PTPN7-216ENST00000492977 ST20-AS1Q8NBB2 130 aa8.77□□□□□ -1.01
PTPN7-216ENST00000492977 IMUPQ9GZP8 106 aa8.77□□□□□ -1.01
PTPN7-216ENST00000492977 DNAH6Q9C0G6 4158 aa8.77□□□□□ -1.01
PTPN7-216ENST00000492977 TGP01266 2768 aa8.76□□□□□ -1.01
PTPN7-216ENST00000492977 PRLHP81277 87 aa8.75□□□□□ -1.01
PTPN7-216ENST00000492977 FUSP35637 526 aaKnown RBP eCLIP8.74□□□□□ -1.01
PTPN7-216ENST00000492977 Q6JHZ5 121 aa8.73□□□□□ -1.01
PTPN7-216ENST00000492977 ANAPC13Q9BS18 74 aa8.73□□□□□ -1.01
PTPN7-216ENST00000492977 UBL5Q9BZL1 73 aa8.73□□□□□ -1.01
PTPN7-216ENST00000492977 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
PTPN7-216ENST00000492977 BCE1O60756 84 aa8.73□□□□□ -1.01
PTPN7-216ENST00000492977 UBE2AP49459 152 aa8.72□□□□□ -1.01
PTPN7-216ENST00000492977 HIGD2AQ9BW72 106 aa8.72□□□□□ -1.01
PTPN7-216ENST00000492977 ALMS1Q8TCU4 4167 aa8.71□□□□□ -1.01
PTPN7-216ENST00000492977 C3orf22Q8N5N4 141 aa8.7□□□□□ -1.02
PTPN7-216ENST00000492977 ATP5EP2Q5VTU8 51 aa8.69□□□□□ -1.02
PTPN7-216ENST00000492977 HECTD4Q9Y4D8 3996 aa8.69□□□□□ -1.02
PTPN7-216ENST00000492977 SMIM29Q86T20 159 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms