RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 A0A096LNI7 61 aa9.03□□□□□ -0.96
PDZRN3-210ENST00000492909 LINC00643Q86TS7 51 aa9.03□□□□□ -0.96
PDZRN3-210ENST00000492909 SMCR5Q8TEV8 140 aa9.03□□□□□ -0.96
PDZRN3-210ENST00000492909 IGLV5-52A0A0A0MRZ9 124 aa9.02□□□□□ -0.97
PDZRN3-210ENST00000492909 OBSCN-AS1Q96MR7 158 aa9.02□□□□□ -0.97
PDZRN3-210ENST00000492909 IMUPQ9GZP8 106 aa9.02□□□□□ -0.97
PDZRN3-210ENST00000492909 NCR3O14931 201 aa9.01□□□□□ -0.97
PDZRN3-210ENST00000492909 VPREB1P12018 145 aa9.01□□□□□ -0.97
PDZRN3-210ENST00000492909 IGKV2-24A0A0C4DH68 120 aa9.01□□□□□ -0.97
PDZRN3-210ENST00000492909 A0A1B0GX51 115 aa9.01□□□□□ -0.97
PDZRN3-210ENST00000492909 FUSP35637 526 aaKnown RBP eCLIP9.01□□□□□ -0.97
PDZRN3-210ENST00000492909 LINC00167Q96N53 147 aa9.01□□□□□ -0.97
PDZRN3-210ENST00000492909 PLA2G2DQ9UNK4 145 aa9.01□□□□□ -0.97
PDZRN3-210ENST00000492909 FAT2Q9NYQ8 4349 aa9□□□□□ -0.97
PDZRN3-210ENST00000492909 DNAH17Q9UFH2 4485 aa9□□□□□ -0.97
PDZRN3-210ENST00000492909 GAGE2AQ6NT46 116 aa9□□□□□ -0.97
PDZRN3-210ENST00000492909 TMEM126AQ9H061 195 aa8.99□□□□□ -0.97
PDZRN3-210ENST00000492909 S100A7L2Q5SY68 101 aa8.99□□□□□ -0.97
PDZRN3-210ENST00000492909 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
PDZRN3-210ENST00000492909 LINC00336Q6ZUF6 198 aa8.99□□□□□ -0.97
PDZRN3-210ENST00000492909 NKAPP1Q8N9T2 125 aa8.99□□□□□ -0.97
PDZRN3-210ENST00000492909 ORMDL1Q9P0S3 153 aa8.99□□□□□ -0.97
PDZRN3-210ENST00000492909 LINC00474Q9P2X8 69 aa8.99□□□□□ -0.97
PDZRN3-210ENST00000492909 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
PDZRN3-210ENST00000492909 CHTF8P0CG12 524 aa8.98□□□□□ -0.97
PDZRN3-210ENST00000492909 M0R378 163 aa8.97□□□□□ -0.97
PDZRN3-210ENST00000492909 KRTAP10-2P60368 255 aa8.97□□□□□ -0.97
PDZRN3-210ENST00000492909 IGLV5-37A0A075B6J1 123 aa8.96□□□□□ -0.97
PDZRN3-210ENST00000492909 FAM19A5Q7Z5A7 132 aaPredicted RBP8.96□□□□□ -0.97
PDZRN3-210ENST00000492909 C14orf132Q9NPU4 83 aa8.96□□□□□ -0.97
PDZRN3-210ENST00000492909 EPPK1P58107 5090 aaKnown RBP8.96□□□□□ -0.98
PDZRN3-210ENST00000492909 IGLV6-57P01721 117 aa8.95□□□□□ -0.98
PDZRN3-210ENST00000492909 KRTAP7-1Q8IUC3 87 aa8.95□□□□□ -0.98
PDZRN3-210ENST00000492909 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
PDZRN3-210ENST00000492909 A0A1B0GVY2 172 aa8.94□□□□□ -0.98
PDZRN3-210ENST00000492909 CCDC179H3BU77 68 aa8.94□□□□□ -0.98
PDZRN3-210ENST00000492909 PKD1P98161 4303 aa8.93□□□□□ -0.98
PDZRN3-210ENST00000492909 A0A1W2PNN7 141 aa8.93□□□□□ -0.98
PDZRN3-210ENST00000492909 SPACA4Q8TDM5 124 aa8.93□□□□□ -0.98
PDZRN3-210ENST00000492909 C7orf33Q8WU49 177 aa8.93□□□□□ -0.98
PDZRN3-210ENST00000492909 DPH3Q96FX2 82 aa8.93□□□□□ -0.98
PDZRN3-210ENST00000492909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.93□□□□□ -0.98
PDZRN3-210ENST00000492909 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
PDZRN3-210ENST00000492909 FAM236AA0A1B0GUQ0 79 aa8.92□□□□□ -0.98
PDZRN3-210ENST00000492909 FAM236BA0A1B0GV22 79 aa8.92□□□□□ -0.98
PDZRN3-210ENST00000492909 PANO1I0J062 215 aa8.92□□□□□ -0.98
PDZRN3-210ENST00000492909 MRPL55Q7Z7F7 128 aaKnown RBP8.92□□□□□ -0.98
PDZRN3-210ENST00000492909 TMEM256-PLSCR3K7ERE1 68 aa8.91□□□□□ -0.98
PDZRN3-210ENST00000492909 C6orf99Q4VX62 202 aa8.91□□□□□ -0.98
PDZRN3-210ENST00000492909 DNAH11Q96DT5 4516 aa8.91□□□□□ -0.98
PDZRN3-210ENST00000492909 B5MCH6 92 aa8.91□□□□□ -0.98
PDZRN3-210ENST00000492909 JMJD7-PLA2G4BH0Y9G9 81 aa8.91□□□□□ -0.98
PDZRN3-210ENST00000492909 TRAV23DV6A0A075B6W5 121 aa8.9□□□□□ -0.98
PDZRN3-210ENST00000492909 CCKP06307 115 aa8.89□□□□□ -0.99
PDZRN3-210ENST00000492909 Q6JHZ5 121 aa8.89□□□□□ -0.99
PDZRN3-210ENST00000492909 LINC00575Q6W349 94 aa8.89□□□□□ -0.99
PDZRN3-210ENST00000492909 LINC00846Q9NV44 126 aa8.89□□□□□ -0.99
PDZRN3-210ENST00000492909 IGLV1-50A0A075B6I6 118 aa8.88□□□□□ -0.99
PDZRN3-210ENST00000492909 RPL37AP8A6NKH3 93 aa8.88□□□□□ -0.99
PDZRN3-210ENST00000492909 PKHD1P08F94 4074 aa8.87□□□□□ -0.99
PDZRN3-210ENST00000492909 ZNF73O43830 326 aaPredicted RBP8.86□□□□□ -0.99
PDZRN3-210ENST00000492909 KCNQ1DNQ9H478 68 aa8.86□□□□□ -0.99
PDZRN3-210ENST00000492909 hADV29S1A0JD25 119 aa8.86□□□□□ -0.99
PDZRN3-210ENST00000492909 EPM2AB3EWF7 344 aa8.86□□□□□ -0.99
PDZRN3-210ENST00000492909 DIRC1Q969H9 104 aa8.86□□□□□ -0.99
PDZRN3-210ENST00000492909 PRYO14603 147 aa8.85□□□□□ -0.99
PDZRN3-210ENST00000492909 KRTAP10-1P60331 282 aa8.85□□□□□ -0.99
PDZRN3-210ENST00000492909 PHF5AQ7RTV0 110 aaKnown RBP8.85□□□□□ -0.99
PDZRN3-210ENST00000492909 PLAC8Q9NZF1 115 aa8.85□□□□□ -0.99
PDZRN3-210ENST00000492909 SS18L2Q9UHA2 77 aa8.85□□□□□ -0.99
PDZRN3-210ENST00000492909 HIST1H4AP62805 103 aaKnown RBP8.84□□□□□ -0.99
PDZRN3-210ENST00000492909 UBE2BP63146 152 aa8.84□□□□□ -1
PDZRN3-210ENST00000492909 IGKV3D-7A0A0C4DH55 119 aa8.83□□□□□ -1
PDZRN3-210ENST00000492909 FAM30AQ9NZY2 134 aa8.83□□□□□ -1
PDZRN3-210ENST00000492909 TRBV7-6A0A0J9YX20 115 aa8.82□□□□□ -1
PDZRN3-210ENST00000492909 H3BQ85 93 aa8.82□□□□□ -1
PDZRN3-210ENST00000492909 Q6ZSA8 131 aa8.82□□□□□ -1
PDZRN3-210ENST00000492909 COX7BP24311 80 aa8.81□□□□□ -1
PDZRN3-210ENST00000492909 REG3GQ6UW15 175 aa8.81□□□□□ -1
PDZRN3-210ENST00000492909 ATOX1O00244 68 aa8.8□□□□□ -1
PDZRN3-210ENST00000492909 SPRR1AP35321 89 aa8.8□□□□□ -1
PDZRN3-210ENST00000492909 ELOF1P60002 83 aaKnown RBP8.8□□□□□ -1
PDZRN3-210ENST00000492909 C3orf22Q8N5N4 141 aa8.8□□□□□ -1
PDZRN3-210ENST00000492909 DNAH5Q8TE73 4624 aa8.79□□□□□ -1
PDZRN3-210ENST00000492909 LOC110117498A0A087WWA1 95 aa8.78□□□□□ -1
PDZRN3-210ENST00000492909 UQCRQO14949 82 aa8.78□□□□□ -1
PDZRN3-210ENST00000492909 RBM3P98179 157 aaKnown RBP8.78□□□□□ -1
PDZRN3-210ENST00000492909 ATP5EP2Q5VTU8 51 aa8.78□□□□□ -1
PDZRN3-210ENST00000492909 CIRBP-AS1Q8TBR5 109 aa8.78□□□□□ -1
PDZRN3-210ENST00000492909 BIRC6Q9NR09 4857 aa8.78□□□□□ -1
PDZRN3-210ENST00000492909 ETDCA0A1B0GVM5 59 aa8.78□□□□□ -1
PDZRN3-210ENST00000492909 KRTAP4-16G5E9R7 235 aaPredicted RBP8.78□□□□□ -1
PDZRN3-210ENST00000492909 Q6ZQT0 140 aa8.78□□□□□ -1
PDZRN3-210ENST00000492909 KRTAP11-1Q8IUC1 163 aa8.78□□□□□ -1
PDZRN3-210ENST00000492909 DYNC1H1Q14204 4646 aaKnown RBP8.77□□□□□ -1
PDZRN3-210ENST00000492909 COX7CP15954 63 aa8.77□□□□□ -1.01
PDZRN3-210ENST00000492909 Q6ZQY7 126 aa8.77□□□□□ -1.01
PDZRN3-210ENST00000492909 SCXQ7RTU7 201 aa8.77□□□□□ -1.01
PDZRN3-210ENST00000492909 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.76□□□□□ -1.01
PDZRN3-210ENST00000492909 LINC00528Q8N1L1 170 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms