RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 C22orf24Q9Y442 160 aa5.86□□□□□ -1.47
SMARCC1-208ENST00000492896 DNAH2Q9P225 4427 aa5.86□□□□□ -1.47
SMARCC1-208ENST00000492896 A0A087WTM6 91 aa5.85□□□□□ -1.47
SMARCC1-208ENST00000492896 INAFM2P0DMQ5 153 aa5.85□□□□□ -1.47
SMARCC1-208ENST00000492896 KRTAP7-1Q8IUC3 87 aa5.85□□□□□ -1.47
SMARCC1-208ENST00000492896 IGLV1-50A0A075B6I6 118 aa5.84□□□□□ -1.47
SMARCC1-208ENST00000492896 C3orf84H3BNL1 204 aa5.84□□□□□ -1.47
SMARCC1-208ENST00000492896 H3BQ85 93 aa5.84□□□□□ -1.47
SMARCC1-208ENST00000492896 C1orf134Q5TEV5 83 aa5.84□□□□□ -1.47
SMARCC1-208ENST00000492896 LINC00528Q8N1L1 170 aa5.84□□□□□ -1.47
SMARCC1-208ENST00000492896 FBN3Q75N90 2809 aa5.84□□□□□ -1.48
SMARCC1-208ENST00000492896 RPL37AP8A6NKH3 93 aa5.83□□□□□ -1.48
SMARCC1-208ENST00000492896 TMEM256-PLSCR3K7ERE1 68 aa5.83□□□□□ -1.48
SMARCC1-208ENST00000492896 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.83□□□□□ -1.48
SMARCC1-208ENST00000492896 Q6ZQY7 126 aa5.83□□□□□ -1.48
SMARCC1-208ENST00000492896 TENM2Q9NT68 2774 aa5.83□□□□□ -1.48
SMARCC1-208ENST00000492896 ETDCA0A1B0GVM5 59 aa5.82□□□□□ -1.48
SMARCC1-208ENST00000492896 GHRHP01286 108 aa5.82□□□□□ -1.48
SMARCC1-208ENST00000492896 CHTF8P0CG12 524 aa5.82□□□□□ -1.48
SMARCC1-208ENST00000492896 SPRR1AP35321 89 aa5.82□□□□□ -1.48
SMARCC1-208ENST00000492896 LINC00474Q9P2X8 69 aa5.82□□□□□ -1.48
SMARCC1-208ENST00000492896 FAM240AA0A1B0GVK7 77 aa5.81□□□□□ -1.48
SMARCC1-208ENST00000492896 A0A1W2PNN7 141 aa5.81□□□□□ -1.48
SMARCC1-208ENST00000492896 OBSCN-AS1Q96MR7 158 aa5.81□□□□□ -1.48
SMARCC1-208ENST00000492896 B5MCH6 92 aa5.8□□□□□ -1.48
SMARCC1-208ENST00000492896 KRTAP4-16G5E9R7 235 aaPredicted RBP5.8□□□□□ -1.48
SMARCC1-208ENST00000492896 JMJD7-PLA2G4BH0Y9G9 81 aa5.8□□□□□ -1.48
SMARCC1-208ENST00000492896 REG3GQ6UW15 175 aa5.8□□□□□ -1.48
SMARCC1-208ENST00000492896 SDIM1Q6ZPB5 146 aa5.8□□□□□ -1.48
SMARCC1-208ENST00000492896 Q6ZRX8 168 aa5.8□□□□□ -1.48
SMARCC1-208ENST00000492896 CDIP1Q9H305 208 aa5.8□□□□□ -1.48
SMARCC1-208ENST00000492896 DHRS4-AS1Q9P1J3 65 aa5.8□□□□□ -1.48
SMARCC1-208ENST00000492896 KMT2AQ03164 3969 aa5.8□□□□□ -1.48
SMARCC1-208ENST00000492896 RTL8CO15255 209 aa5.79□□□□□ -1.48
SMARCC1-208ENST00000492896 C14orf132Q9NPU4 83 aa5.79□□□□□ -1.48
SMARCC1-208ENST00000492896 A0A1B0GV72 72 aa5.78□□□□□ -1.48
SMARCC1-208ENST00000492896 ACYP1P07311 99 aa5.78□□□□□ -1.48
SMARCC1-208ENST00000492896 UBE2BP63146 152 aa5.78□□□□□ -1.48
SMARCC1-208ENST00000492896 GAGE2AQ6NT46 116 aa5.77□□□□□ -1.49
SMARCC1-208ENST00000492896 PHF5AQ7RTV0 110 aaKnown RBP5.77□□□□□ -1.49
SMARCC1-208ENST00000492896 SPACA4Q8TDM5 124 aa5.77□□□□□ -1.49
SMARCC1-208ENST00000492896 LAMTOR3Q9UHA4 124 aa5.77□□□□□ -1.49
SMARCC1-208ENST00000492896 FRAS1Q86XX4 4008 aa5.76□□□□□ -1.49
SMARCC1-208ENST00000492896 IGLV5-52A0A0A0MRZ9 124 aa5.76□□□□□ -1.49
SMARCC1-208ENST00000492896 SIGMAR1Q99720 223 aa5.76□□□□□ -1.49
SMARCC1-208ENST00000492896 Q9BRP9 147 aa5.76□□□□□ -1.49
SMARCC1-208ENST00000492896 PANO1I0J062 215 aa5.75□□□□□ -1.49
SMARCC1-208ENST00000492896 TNP2Q05952 138 aa5.75□□□□□ -1.49
SMARCC1-208ENST00000492896 FAM19A1Q7Z5A9 133 aa5.75□□□□□ -1.49
SMARCC1-208ENST00000492896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.75□□□□□ -1.49
SMARCC1-208ENST00000492896 CCKP06307 115 aa5.74□□□□□ -1.49
SMARCC1-208ENST00000492896 FUSP35637 526 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMARCC1-208ENST00000492896 XGP55808 180 aa5.74□□□□□ -1.49
SMARCC1-208ENST00000492896 RBM3P98179 157 aaKnown RBP5.74□□□□□ -1.49
SMARCC1-208ENST00000492896 DPH3Q96FX2 82 aa5.74□□□□□ -1.49
SMARCC1-208ENST00000492896 HECTD4Q9Y4D8 3996 aa5.74□□□□□ -1.49
SMARCC1-208ENST00000492896 HYDINQ4G0P3 5121 aa5.73□□□□□ -1.49
SMARCC1-208ENST00000492896 LOC110117498A0A087WWA1 95 aa5.73□□□□□ -1.49
SMARCC1-208ENST00000492896 EPM2AB3EWF7 344 aa5.73□□□□□ -1.49
SMARCC1-208ENST00000492896 NDUFV3P56181 108 aaKnown RBP5.73□□□□□ -1.49
SMARCC1-208ENST00000492896 DSCR8Q96T75 97 aa5.73□□□□□ -1.49
SMARCC1-208ENST00000492896 DNAH11Q96DT5 4516 aa5.72□□□□□ -1.49
SMARCC1-208ENST00000492896 IGLV5-48A0A075B6I7 105 aa5.72□□□□□ -1.49
SMARCC1-208ENST00000492896 MT-ATP8P03928 68 aa5.72□□□□□ -1.49
SMARCC1-208ENST00000492896 PDE6GP18545 87 aa5.72□□□□□ -1.49
SMARCC1-208ENST00000492896 PRLHP81277 87 aa5.72□□□□□ -1.49
SMARCC1-208ENST00000492896 KRTAP11-1Q8IUC1 163 aa5.72□□□□□ -1.49
SMARCC1-208ENST00000492896 DEFB105AQ8NG35 78 aa5.72□□□□□ -1.49
SMARCC1-208ENST00000492896 SMCR5Q8TEV8 140 aa5.72□□□□□ -1.49
SMARCC1-208ENST00000492896 DNAH8Q96JB1 4490 aa5.72□□□□□ -1.49
SMARCC1-208ENST00000492896 SACSQ9NZJ4 4579 aa5.71□□□□□ -1.5
SMARCC1-208ENST00000492896 ERC2-IT1O76042 136 aa5.71□□□□□ -1.5
SMARCC1-208ENST00000492896 LINC01547P58512 204 aaPredicted RBP5.71□□□□□ -1.5
SMARCC1-208ENST00000492896 C21orf62-AS1Q17RA5 79 aa5.71□□□□□ -1.5
SMARCC1-208ENST00000492896 Q6ZQT0 140 aa5.71□□□□□ -1.5
SMARCC1-208ENST00000492896 Q8N377 158 aa5.71□□□□□ -1.5
SMARCC1-208ENST00000492896 ST20-AS1Q8NBB2 130 aa5.71□□□□□ -1.5
SMARCC1-208ENST00000492896 TGP01266 2768 aa5.71□□□□□ -1.5
SMARCC1-208ENST00000492896 DNAH5Q8TE73 4624 aa5.7□□□□□ -1.5
SMARCC1-208ENST00000492896 H0Y9J4 135 aa5.7□□□□□ -1.5
SMARCC1-208ENST00000492896 BCE1O60756 84 aa5.7□□□□□ -1.5
SMARCC1-208ENST00000492896 UBE2AP49459 152 aa5.7□□□□□ -1.5
SMARCC1-208ENST00000492896 HIGD2AQ9BW72 106 aa5.7□□□□□ -1.5
SMARCC1-208ENST00000492896 PLAC8Q9NZF1 115 aa5.7□□□□□ -1.5
SMARCC1-208ENST00000492896 TRBV7-4A0A0J9YYF1 115 aa5.69□□□□□ -1.5
SMARCC1-208ENST00000492896 LINC00643Q86TS7 51 aa5.69□□□□□ -1.5
SMARCC1-208ENST00000492896 SCGB1A1P11684 91 aa5.68□□□□□ -1.5
SMARCC1-208ENST00000492896 LINC00846Q9NV44 126 aa5.68□□□□□ -1.5
SMARCC1-208ENST00000492896 FAT2Q9NYQ8 4349 aa5.67□□□□□ -1.5
SMARCC1-208ENST00000492896 KRTAP10-2P60368 255 aa5.67□□□□□ -1.5
SMARCC1-208ENST00000492896 LCE6AA0A183 80 aa5.66□□□□□ -1.5
SMARCC1-208ENST00000492896 KRTAP13-1Q8IUC0 172 aa5.66□□□□□ -1.5
SMARCC1-208ENST00000492896 C3orf22Q8N5N4 141 aa5.66□□□□□ -1.5
SMARCC1-208ENST00000492896 F8WEM9 126 aa5.65□□□□□ -1.5
SMARCC1-208ENST00000492896 Q6JHZ5 121 aa5.65□□□□□ -1.5
SMARCC1-208ENST00000492896 Q6Q795 121 aa5.65□□□□□ -1.5
SMARCC1-208ENST00000492896 TRBV7-7A0A0K0K1E9 115 aa5.64□□□□□ -1.51
SMARCC1-208ENST00000492896 SMIM29Q86T20 159 aa5.64□□□□□ -1.51
SMARCC1-208ENST00000492896 UBL5Q9BZL1 73 aa5.64□□□□□ -1.51
SMARCC1-208ENST00000492896 SPRR1BP22528 89 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms