RNA–Protein interactions for RNA: ENST00000487943.5

IFT80-223, Transcript of intraflagellar transport 80, human

TSL 2

Gene IFT80, Length 3,893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT80-223	ENST00000487943	TMEM254	Q8TBM7	123 aa		4.4	□□□□□ -1.7
IFT80-223	ENST00000487943	GCN1	Q92616	2671 aa	Known RBP	4.4	□□□□□ -1.71
IFT80-223	ENST00000487943	ANK2	Q01484	3957 aa		4.39	□□□□□ -1.71
IFT80-223	ENST00000487943		Q6ZRP5	223 aa		4.39	□□□□□ -1.71
IFT80-223	ENST00000487943	ATR	Q13535	2644 aa		4.39	□□□□□ -1.71
IFT80-223	ENST00000487943	TLX1NB	P0CAT3	122 aa		4.39	□□□□□ -1.71
IFT80-223	ENST00000487943	TNP2	Q05952	138 aa		4.39	□□□□□ -1.71
IFT80-223	ENST00000487943	IGLV5-37	A0A075B6J1	123 aa		4.39	□□□□□ -1.71
IFT80-223	ENST00000487943	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.39	□□□□□ -1.71
IFT80-223	ENST00000487943	SCX	Q7RTU7	201 aa		4.39	□□□□□ -1.71
IFT80-223	ENST00000487943	WFDC10B	Q8IUB3	73 aa		4.39	□□□□□ -1.71
IFT80-223	ENST00000487943	HIGD2B	Q4VC39	106 aa		4.38	□□□□□ -1.71
IFT80-223	ENST00000487943		Q8N377	158 aa		4.38	□□□□□ -1.71
IFT80-223	ENST00000487943	TENM4	Q6N022	2769 aa		4.38	□□□□□ -1.71
IFT80-223	ENST00000487943	SMR3A	Q99954	134 aa		4.38	□□□□□ -1.71
IFT80-223	ENST00000487943	VWF	P04275	2813 aa		4.38	□□□□□ -1.71
IFT80-223	ENST00000487943	SPRR1A	P35321	89 aa		4.38	□□□□□ -1.71
IFT80-223	ENST00000487943	PRO0628	Q9UI54	55 aa		4.38	□□□□□ -1.71
IFT80-223	ENST00000487943	NBEAL2	Q6ZNJ1	2754 aa		4.38	□□□□□ -1.71
IFT80-223	ENST00000487943	INAFM1	C9JVW0	142 aa		4.37	□□□□□ -1.71
IFT80-223	ENST00000487943	LINC01556	Q5JQF7	62 aa		4.37	□□□□□ -1.71
IFT80-223	ENST00000487943	PRY	O14603	147 aa		4.37	□□□□□ -1.71
IFT80-223	ENST00000487943	KPRP	Q5T749	579 aa	Predicted RBP	4.37	□□□□□ -1.71
IFT80-223	ENST00000487943		Q6ZTC4	211 aa		4.37	□□□□□ -1.71
IFT80-223	ENST00000487943	DHRS4-AS1	Q9P1J3	65 aa		4.37	□□□□□ -1.71
IFT80-223	ENST00000487943	TEP1	Q99973	2627 aa	Known RBP	4.36	□□□□□ -1.71
IFT80-223	ENST00000487943	LINC00336	Q6ZUF6	198 aa		4.36	□□□□□ -1.71
IFT80-223	ENST00000487943	SPRR4	Q96PI1	79 aa		4.36	□□□□□ -1.71
IFT80-223	ENST00000487943	C7orf33	Q8WU49	177 aa		4.36	□□□□□ -1.71
IFT80-223	ENST00000487943		Q6ZRX8	168 aa		4.35	□□□□□ -1.71
IFT80-223	ENST00000487943		Q8N9L7	120 aa		4.35	□□□□□ -1.71
IFT80-223	ENST00000487943	SYCN	Q0VAF6	134 aa		4.35	□□□□□ -1.71
IFT80-223	ENST00000487943	SERTAD4-AS1	Q5TG53	156 aa		4.35	□□□□□ -1.71
IFT80-223	ENST00000487943		A0A1W2PNM2	257 aa		4.35	□□□□□ -1.71
IFT80-223	ENST00000487943	ESRG	Q1W209	222 aa		4.35	□□□□□ -1.71
IFT80-223	ENST00000487943	MGAM2	Q2M2H8	2515 aa		4.34	□□□□□ -1.71
IFT80-223	ENST00000487943		Q9BRP9	147 aa		4.34	□□□□□ -1.71
IFT80-223	ENST00000487943	IGLV1-50	A0A075B6I6	118 aa		4.34	□□□□□ -1.71
IFT80-223	ENST00000487943	ZCCHC13	Q8WW36	166 aa	Known RBP	4.34	□□□□□ -1.71
IFT80-223	ENST00000487943		Q8NBF4	154 aa		4.33	□□□□□ -1.72
IFT80-223	ENST00000487943	LINC00474	Q9P2X8	69 aa		4.33	□□□□□ -1.72
IFT80-223	ENST00000487943		V9GYY9	64 aa		4.33	□□□□□ -1.72
IFT80-223	ENST00000487943	MAST4	O15021	2626 aa		4.33	□□□□□ -1.72
IFT80-223	ENST00000487943	TRRAP	Q9Y4A5	3859 aa		4.33	□□□□□ -1.72
IFT80-223	ENST00000487943	DNAH10OS	P0CZ25	163 aa		4.33	□□□□□ -1.72
IFT80-223	ENST00000487943	FUS	P35637	526 aa	Known RBP eCLIP	4.33	□□□□□ -1.72
IFT80-223	ENST00000487943	NKAPP1	Q8N9T2	125 aa		4.33	□□□□□ -1.72
IFT80-223	ENST00000487943	HIVEP1	P15822	2718 aa		4.33	□□□□□ -1.72
IFT80-223	ENST00000487943	FAM229B	Q4G0N7	80 aa		4.33	□□□□□ -1.72
IFT80-223	ENST00000487943	C3orf84	H3BNL1	204 aa		4.32	□□□□□ -1.72
IFT80-223	ENST00000487943	KRTAP7-1	Q8IUC3	87 aa		4.32	□□□□□ -1.72
IFT80-223	ENST00000487943	DSCR10	P59022	87 aa		4.32	□□□□□ -1.72
IFT80-223	ENST00000487943	SMIM29	Q86T20	159 aa		4.31	□□□□□ -1.72
IFT80-223	ENST00000487943	HIGD2A	Q9BW72	106 aa		4.31	□□□□□ -1.72
IFT80-223	ENST00000487943	SEC61G	P60059	68 aa		4.31	□□□□□ -1.72
IFT80-223	ENST00000487943	C1orf137	Q5JT78	98 aa		4.31	□□□□□ -1.72
IFT80-223	ENST00000487943	RETN	Q9HD89	108 aa		4.31	□□□□□ -1.72
IFT80-223	ENST00000487943	IGKV2D-24	A0A075B6R9	120 aa		4.3	□□□□□ -1.72
IFT80-223	ENST00000487943	hDV103S1	A0JD37	113 aa		4.3	□□□□□ -1.72
IFT80-223	ENST00000487943	DEFB105A	Q8NG35	78 aa		4.29	□□□□□ -1.72
IFT80-223	ENST00000487943	TENM1	Q9UKZ4	2725 aa		4.29	□□□□□ -1.72
IFT80-223	ENST00000487943	IGLV8-61	A0A075B6I0	122 aa		4.29	□□□□□ -1.72
IFT80-223	ENST00000487943	KRTAP10-11	P60412	298 aa		4.29	□□□□□ -1.72
IFT80-223	ENST00000487943	ITPR2	Q14571	2701 aa		4.29	□□□□□ -1.72
IFT80-223	ENST00000487943	ETDC	A0A1B0GVM5	59 aa		4.29	□□□□□ -1.72
IFT80-223	ENST00000487943	CYP4F30P	Q9H0H9	118 aa		4.29	□□□□□ -1.72
IFT80-223	ENST00000487943	ST20-AS1	Q8NBB2	130 aa		4.28	□□□□□ -1.72
IFT80-223	ENST00000487943	FAM30A	Q9NZY2	134 aa		4.28	□□□□□ -1.72
IFT80-223	ENST00000487943	FAM168B	A1KXE4	195 aa		4.28	□□□□□ -1.72
IFT80-223	ENST00000487943		Q1T7F1	81 aa		4.28	□□□□□ -1.72
IFT80-223	ENST00000487943	BRK1	Q8WUW1	75 aa		4.28	□□□□□ -1.72
IFT80-223	ENST00000487943	UNC79	Q9P2D8	2635 aa		4.28	□□□□□ -1.73
IFT80-223	ENST00000487943	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.27	□□□□□ -1.73
IFT80-223	ENST00000487943		K7EQZ3	153 aa		4.27	□□□□□ -1.73
IFT80-223	ENST00000487943	MRPL55	Q7Z7F7	128 aa	Known RBP	4.27	□□□□□ -1.73
IFT80-223	ENST00000487943	DEFB131B	A0A096LNP1	70 aa		4.27	□□□□□ -1.73
IFT80-223	ENST00000487943	RPL37AP8	A6NKH3	93 aa		4.27	□□□□□ -1.73
IFT80-223	ENST00000487943	OTOG	Q6ZRI0	2925 aa		4.26	□□□□□ -1.73
IFT80-223	ENST00000487943	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.26	□□□□□ -1.73
IFT80-223	ENST00000487943	HCG22	E2RYF7	251 aa		4.26	□□□□□ -1.73
IFT80-223	ENST00000487943	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.26	□□□□□ -1.73
IFT80-223	ENST00000487943	LINC00476	Q8WZB0	136 aa		4.25	□□□□□ -1.73
IFT80-223	ENST00000487943	REG3G	Q6UW15	175 aa		4.25	□□□□□ -1.73
IFT80-223	ENST00000487943	UBE2DNL	Q8IWF7	75 aa		4.25	□□□□□ -1.73
IFT80-223	ENST00000487943	C11orf45	Q8TAV5	145 aa		4.25	□□□□□ -1.73
IFT80-223	ENST00000487943	C1orf64	Q8NEQ6	169 aa		4.25	□□□□□ -1.73
IFT80-223	ENST00000487943	CASC10	Q5T4H9	136 aa		4.24	□□□□□ -1.73
IFT80-223	ENST00000487943	IGFL1	Q6UW32	110 aa		4.24	□□□□□ -1.73
IFT80-223	ENST00000487943	LINC00588	Q9Y4M8	146 aa		4.24	□□□□□ -1.73
IFT80-223	ENST00000487943	NSD1	Q96L73	2696 aa	Predicted RBP	4.24	□□□□□ -1.73
IFT80-223	ENST00000487943	LYST	Q99698	3801 aa		4.24	□□□□□ -1.73
IFT80-223	ENST00000487943	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.24	□□□□□ -1.73
IFT80-223	ENST00000487943	OXLD1	Q5BKU9	147 aa		4.24	□□□□□ -1.73
IFT80-223	ENST00000487943	PSCA	O43653	123 aa		4.23	□□□□□ -1.73
IFT80-223	ENST00000487943	DNAH10	Q8IVF4	4471 aa		4.23	□□□□□ -1.73
IFT80-223	ENST00000487943	NDUFB1	O75438	58 aa		4.23	□□□□□ -1.73
IFT80-223	ENST00000487943	MPLKIP	Q8TAP9	179 aa		4.23	□□□□□ -1.73
IFT80-223	ENST00000487943	C1orf195	Q5TG92	126 aa		4.22	□□□□□ -1.73
IFT80-223	ENST00000487943	PRB2	P02812	416 aa	Predicted RBP	4.22	□□□□□ -1.73
IFT80-223	ENST00000487943	SPRR1B	P22528	89 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms