RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CHTF8P0CG12 524 aa5.14□□□□□ -1.59
SNX13-208ENST00000482558 DHRS4-AS1Q9P1J3 65 aa5.14□□□□□ -1.59
SNX13-208ENST00000482558 IGLV10-54A0A075B6I4 117 aa5.13□□□□□ -1.59
SNX13-208ENST00000482558 IGHV6-1A0A0B4J1U7 121 aa5.13□□□□□ -1.59
SNX13-208ENST00000482558 LINC01556Q5JQF7 62 aa5.13□□□□□ -1.59
SNX13-208ENST00000482558 ENHOQ6UWT2 76 aa5.13□□□□□ -1.59
SNX13-208ENST00000482558 Q8NBF4 154 aa5.13□□□□□ -1.59
SNX13-208ENST00000482558 PKIGQ9Y2B9 76 aa5.13□□□□□ -1.59
SNX13-208ENST00000482558 F8P00451 2351 aa5.13□□□□□ -1.59
SNX13-208ENST00000482558 IGLV8-61A0A075B6I0 122 aa5.12□□□□□ -1.59
SNX13-208ENST00000482558 DEFB131BA0A096LNP1 70 aa5.12□□□□□ -1.59
SNX13-208ENST00000482558 TRAV10A0A0B4J240 114 aa5.12□□□□□ -1.59
SNX13-208ENST00000482558 JMJD7-PLA2G4BH0Y9G9 81 aa5.12□□□□□ -1.59
SNX13-208ENST00000482558 S100A7L2Q5SY68 101 aa5.12□□□□□ -1.59
SNX13-208ENST00000482558 Q6ZTC4 211 aa5.12□□□□□ -1.59
SNX13-208ENST00000482558 LINC00167Q96N53 147 aa5.12□□□□□ -1.59
SNX13-208ENST00000482558 IMUPQ9GZP8 106 aa5.12□□□□□ -1.59
SNX13-208ENST00000482558 ORMDL1Q9P0S3 153 aa5.12□□□□□ -1.59
SNX13-208ENST00000482558 SS18L2Q9UHA2 77 aa5.12□□□□□ -1.59
SNX13-208ENST00000482558 VWFP04275 2813 aa5.12□□□□□ -1.59
SNX13-208ENST00000482558 TRBV7-6A0A0J9YX20 115 aa5.11□□□□□ -1.59
SNX13-208ENST00000482558 TMEM256-PLSCR3K7ERE1 68 aa5.11□□□□□ -1.59
SNX13-208ENST00000482558 CASC10Q5T4H9 136 aa5.11□□□□□ -1.59
SNX13-208ENST00000482558 RMI2Q96E14 147 aa5.11□□□□□ -1.59
SNX13-208ENST00000482558 RBM12B-AS1Q9P1G2 102 aa5.11□□□□□ -1.59
SNX13-208ENST00000482558 TENM1Q9UKZ4 2725 aa5.11□□□□□ -1.59
SNX13-208ENST00000482558 MT-ATP8P03928 68 aa5.1□□□□□ -1.59
SNX13-208ENST00000482558 DNAH10OSP0CZ25 163 aa5.1□□□□□ -1.59
SNX13-208ENST00000482558 UNQ6190/PRO20217Q6UXQ8 127 aa5.1□□□□□ -1.59
SNX13-208ENST00000482558 OBSCN-AS1Q96MR7 158 aa5.1□□□□□ -1.59
SNX13-208ENST00000482558 NBEAL2Q6ZNJ1 2754 aa5.1□□□□□ -1.59
SNX13-208ENST00000482558 LECT2O14960 151 aa5.09□□□□□ -1.59
SNX13-208ENST00000482558 IGLV6-57P01721 117 aa5.09□□□□□ -1.59
SNX13-208ENST00000482558 CXCL6P80162 114 aa5.09□□□□□ -1.59
SNX13-208ENST00000482558 ESRGQ1W209 222 aa5.09□□□□□ -1.59
SNX13-208ENST00000482558 LINC00643Q86TS7 51 aa5.09□□□□□ -1.59
SNX13-208ENST00000482558 Q8N814 137 aa5.09□□□□□ -1.59
SNX13-208ENST00000482558 CAMK2N2Q96S95 79 aa5.09□□□□□ -1.59
SNX13-208ENST00000482558 TM2D3Q9BRN9 247 aa5.09□□□□□ -1.59
SNX13-208ENST00000482558 IGLV7-46A0A075B6I9 117 aa5.08□□□□□ -1.6
SNX13-208ENST00000482558 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
SNX13-208ENST00000482558 A0A087WYN8 130 aa5.08□□□□□ -1.6
SNX13-208ENST00000482558 FAM236DA0A1B0GTK5 79 aa5.08□□□□□ -1.6
SNX13-208ENST00000482558 FAM236CP0DP71 79 aa5.08□□□□□ -1.6
SNX13-208ENST00000482558 SDIM1Q6ZPB5 146 aa5.08□□□□□ -1.6
SNX13-208ENST00000482558 SMIM29Q86T20 159 aa5.08□□□□□ -1.6
SNX13-208ENST00000482558 WFDC10BQ8IUB3 73 aa5.08□□□□□ -1.6
SNX13-208ENST00000482558 ANAPC13Q9BS18 74 aa5.08□□□□□ -1.6
SNX13-208ENST00000482558 TRBV7-7A0A0K0K1E9 115 aa5.07□□□□□ -1.6
SNX13-208ENST00000482558 NDUFC2-KCTD14E9PQ53 114 aa5.07□□□□□ -1.6
SNX13-208ENST00000482558 PDE6GP18545 87 aa5.07□□□□□ -1.6
SNX13-208ENST00000482558 KRTAP26-1Q6PEX3 210 aa5.07□□□□□ -1.6
SNX13-208ENST00000482558 Q6ZRU5 148 aa5.07□□□□□ -1.6
SNX13-208ENST00000482558 C6orf48Q9UBA6 75 aa5.07□□□□□ -1.6
SNX13-208ENST00000482558 hADV29S1A0JD25 119 aa5.06□□□□□ -1.6
SNX13-208ENST00000482558 M0R378 163 aa5.06□□□□□ -1.6
SNX13-208ENST00000482558 MP68P56378 58 aa5.06□□□□□ -1.6
SNX13-208ENST00000482558 C9orf116Q5BN46 136 aaPredicted RBP5.06□□□□□ -1.6
SNX13-208ENST00000482558 LINC00575Q6W349 94 aa5.06□□□□□ -1.6
SNX13-208ENST00000482558 UPK3BQ9BT76 320 aa5.06□□□□□ -1.6
SNX13-208ENST00000482558 IGKV2D-24A0A075B6R9 120 aa5.05□□□□□ -1.6
SNX13-208ENST00000482558 NCR3O14931 201 aa5.05□□□□□ -1.6
SNX13-208ENST00000482558 TLX1NBP0CAT3 122 aa5.05□□□□□ -1.6
SNX13-208ENST00000482558 DIRC1Q969H9 104 aa5.05□□□□□ -1.6
SNX13-208ENST00000482558 C22orf24Q9Y442 160 aa5.05□□□□□ -1.6
SNX13-208ENST00000482558 TRAV23DV6A0A075B6W5 121 aa5.04□□□□□ -1.6
SNX13-208ENST00000482558 A0A087X002 238 aa5.04□□□□□ -1.6
SNX13-208ENST00000482558 KRTAP4-16G5E9R7 235 aaPredicted RBP5.04□□□□□ -1.6
SNX13-208ENST00000482558 SYCNQ0VAF6 134 aa5.04□□□□□ -1.6
SNX13-208ENST00000482558 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.04□□□□□ -1.6
SNX13-208ENST00000482558 C15orf56Q8N910 161 aa5.04□□□□□ -1.6
SNX13-208ENST00000482558 C7orf33Q8WU49 177 aa5.04□□□□□ -1.6
SNX13-208ENST00000482558 TRRAPQ9Y4A5 3859 aa5.04□□□□□ -1.6
SNX13-208ENST00000482558 ZNF73O43830 326 aaPredicted RBP5.03□□□□□ -1.6
SNX13-208ENST00000482558 CCKP06307 115 aa5.03□□□□□ -1.6
SNX13-208ENST00000482558 ATP5EP2Q5VTU8 51 aa5.03□□□□□ -1.6
SNX13-208ENST00000482558 DNAH3Q8TD57 4116 aa5.03□□□□□ -1.6
SNX13-208ENST00000482558 COX7BP24311 80 aa5.02□□□□□ -1.61
SNX13-208ENST00000482558 LOC110117498A0A087WWA1 95 aa5.01□□□□□ -1.61
SNX13-208ENST00000482558 TRBV10-3A0A0K0K1G6 114 aa5.01□□□□□ -1.61
SNX13-208ENST00000482558 K7EIL1 84 aa5.01□□□□□ -1.61
SNX13-208ENST00000482558 ELOF1P60002 83 aaKnown RBP5.01□□□□□ -1.61
SNX13-208ENST00000482558 RBM3P98179 157 aaKnown RBP5.01□□□□□ -1.61
SNX13-208ENST00000482558 HIGD2BQ4VC39 106 aa5.01□□□□□ -1.61
SNX13-208ENST00000482558 Q6JHZ5 121 aa5.01□□□□□ -1.61
SNX13-208ENST00000482558 C14orf132Q9NPU4 83 aa5.01□□□□□ -1.61
SNX13-208ENST00000482558 LINC00588Q9Y4M8 146 aa5.01□□□□□ -1.61
SNX13-208ENST00000482558 LINC00526Q96FQ7 95 aa5□□□□□ -1.61
SNX13-208ENST00000482558 XAGE1AQ9HD64 81 aa5□□□□□ -1.61
SNX13-208ENST00000482558 CMYA5Q8N3K9 4069 aa4.99□□□□□ -1.61
SNX13-208ENST00000482558 STAB1Q9NY15 2570 aa4.99□□□□□ -1.61
SNX13-208ENST00000482558 Q8NDZ9 215 aa4.99□□□□□ -1.61
SNX13-208ENST00000482558 DSCR8Q96T75 97 aa4.99□□□□□ -1.61
SNX13-208ENST00000482558 KCNQ1DNQ9H478 68 aa4.99□□□□□ -1.61
SNX13-208ENST00000482558 LAMTOR3Q9UHA4 124 aa4.99□□□□□ -1.61
SNX13-208ENST00000482558 C14orf177Q52M58 125 aa4.98□□□□□ -1.61
SNX13-208ENST00000482558 UBL5Q9BZL1 73 aa4.98□□□□□ -1.61
SNX13-208ENST00000482558 LOC107984640A0A0U1RRK4 108 aa4.97□□□□□ -1.61
SNX13-208ENST00000482558 A0A1B0GW54 56 aa4.97□□□□□ -1.61
SNX13-208ENST00000482558 EPM2AB3EWF7 344 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms