RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 DNAH11Q96DT5 4516 aa3.97□□□□□ -1.77
CLK1-210ENST00000473565 WWC2-AS2Q96NR7 200 aa3.97□□□□□ -1.77
CLK1-210ENST00000473565 C14orf132Q9NPU4 83 aa3.97□□□□□ -1.77
CLK1-210ENST00000473565 ELOF1P60002 83 aaKnown RBP3.96□□□□□ -1.78
CLK1-210ENST00000473565 A0A087WTM6 91 aa3.96□□□□□ -1.78
CLK1-210ENST00000473565 C16orf90A8MZG2 172 aa3.96□□□□□ -1.78
CLK1-210ENST00000473565 C14orf177Q52M58 125 aa3.96□□□□□ -1.78
CLK1-210ENST00000473565 MRPL55Q7Z7F7 128 aaKnown RBP3.96□□□□□ -1.78
CLK1-210ENST00000473565 KCNQ1DNQ9H478 68 aa3.95□□□□□ -1.78
CLK1-210ENST00000473565 PLA2G2DQ9UNK4 145 aa3.95□□□□□ -1.78
CLK1-210ENST00000473565 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
CLK1-210ENST00000473565 DNAH8Q96JB1 4490 aa3.95□□□□□ -1.78
CLK1-210ENST00000473565 IGLV1-50A0A075B6I6 118 aa3.95□□□□□ -1.78
CLK1-210ENST00000473565 KRTAP11-1Q8IUC1 163 aa3.95□□□□□ -1.78
CLK1-210ENST00000473565 LINC00528Q8N1L1 170 aa3.95□□□□□ -1.78
CLK1-210ENST00000473565 C9orf163Q8N9P6 203 aa3.95□□□□□ -1.78
CLK1-210ENST00000473565 LINC00476Q8WZB0 136 aa3.95□□□□□ -1.78
CLK1-210ENST00000473565 SACSQ9NZJ4 4579 aa3.95□□□□□ -1.78
CLK1-210ENST00000473565 PHF5AQ7RTV0 110 aaKnown RBP3.95□□□□□ -1.78
CLK1-210ENST00000473565 IGLV5-37A0A075B6J1 123 aa3.94□□□□□ -1.78
CLK1-210ENST00000473565 SDIM1Q6ZPB5 146 aa3.94□□□□□ -1.78
CLK1-210ENST00000473565 FAT2Q9NYQ8 4349 aa3.94□□□□□ -1.78
CLK1-210ENST00000473565 A0A1B0GX51 115 aa3.94□□□□□ -1.78
CLK1-210ENST00000473565 XGP55808 180 aa3.94□□□□□ -1.78
CLK1-210ENST00000473565 C1orf134Q5TEV5 83 aa3.94□□□□□ -1.78
CLK1-210ENST00000473565 GAGE2AQ6NT46 116 aa3.94□□□□□ -1.78
CLK1-210ENST00000473565 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.94□□□□□ -1.78
CLK1-210ENST00000473565 MT-ATP8P03928 68 aa3.93□□□□□ -1.78
CLK1-210ENST00000473565 DEFB105AQ8NG35 78 aa3.93□□□□□ -1.78
CLK1-210ENST00000473565 DPH3Q96FX2 82 aa3.93□□□□□ -1.78
CLK1-210ENST00000473565 KRTAP4-16G5E9R7 235 aaPredicted RBP3.93□□□□□ -1.78
CLK1-210ENST00000473565 TNP2Q05952 138 aa3.93□□□□□ -1.78
CLK1-210ENST00000473565 Q9BRP9 147 aa3.93□□□□□ -1.78
CLK1-210ENST00000473565 PKD1P98161 4303 aa3.93□□□□□ -1.78
CLK1-210ENST00000473565 ETDCA0A1B0GVM5 59 aa3.93□□□□□ -1.78
CLK1-210ENST00000473565 SNCGO76070 127 aa3.93□□□□□ -1.78
CLK1-210ENST00000473565 LAMTOR3Q9UHA4 124 aa3.93□□□□□ -1.78
CLK1-210ENST00000473565 TRBV7-6A0A0J9YX20 115 aa3.92□□□□□ -1.78
CLK1-210ENST00000473565 B5MCH6 92 aa3.92□□□□□ -1.78
CLK1-210ENST00000473565 TMEM256-PLSCR3K7ERE1 68 aa3.92□□□□□ -1.78
CLK1-210ENST00000473565 PRYO14603 147 aa3.92□□□□□ -1.78
CLK1-210ENST00000473565 RTL8CO15255 209 aa3.92□□□□□ -1.78
CLK1-210ENST00000473565 ERC2-IT1O76042 136 aa3.92□□□□□ -1.78
CLK1-210ENST00000473565 PRLHP81277 87 aa3.92□□□□□ -1.78
CLK1-210ENST00000473565 ST20-AS1Q8NBB2 130 aa3.92□□□□□ -1.78
CLK1-210ENST00000473565 Q6ZRX8 168 aa3.92□□□□□ -1.78
CLK1-210ENST00000473565 OBSCN-AS1Q96MR7 158 aa3.92□□□□□ -1.78
CLK1-210ENST00000473565 CBY1Q9Y3M2 126 aa3.92□□□□□ -1.78
CLK1-210ENST00000473565 INAFM2P0DMQ5 153 aa3.91□□□□□ -1.78
CLK1-210ENST00000473565 SPRR1AP35321 89 aa3.91□□□□□ -1.78
CLK1-210ENST00000473565 UBE2BP63146 152 aa3.91□□□□□ -1.78
CLK1-210ENST00000473565 REG3GQ6UW15 175 aa3.91□□□□□ -1.78
CLK1-210ENST00000473565 C3orf22Q8N5N4 141 aa3.91□□□□□ -1.78
CLK1-210ENST00000473565 SMCR5Q8TEV8 140 aa3.91□□□□□ -1.78
CLK1-210ENST00000473565 SIGMAR1Q99720 223 aa3.91□□□□□ -1.78
CLK1-210ENST00000473565 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.91□□□□□ -1.78
CLK1-210ENST00000473565 FAM19A1Q7Z5A9 133 aa3.9□□□□□ -1.78
CLK1-210ENST00000473565 IGLV5-52A0A0A0MRZ9 124 aa3.9□□□□□ -1.79
CLK1-210ENST00000473565 KRTAP10-2P60368 255 aa3.89□□□□□ -1.79
CLK1-210ENST00000473565 C21orf62-AS1Q17RA5 79 aa3.89□□□□□ -1.79
CLK1-210ENST00000473565 Q8N377 158 aa3.89□□□□□ -1.79
CLK1-210ENST00000473565 SPACA4Q8TDM5 124 aa3.89□□□□□ -1.79
CLK1-210ENST00000473565 HIGD2AQ9BW72 106 aa3.89□□□□□ -1.79
CLK1-210ENST00000473565 PKHD1P08F94 4074 aa3.89□□□□□ -1.79
CLK1-210ENST00000473565 NDUFV3P56181 108 aaKnown RBP3.89□□□□□ -1.79
CLK1-210ENST00000473565 LINC01547P58512 204 aaPredicted RBP3.89□□□□□ -1.79
CLK1-210ENST00000473565 HAMPP81172 84 aa3.89□□□□□ -1.79
CLK1-210ENST00000473565 RBM3P98179 157 aaKnown RBP3.89□□□□□ -1.79
CLK1-210ENST00000473565 LINC00846Q9NV44 126 aa3.89□□□□□ -1.79
CLK1-210ENST00000473565 FAM240AA0A1B0GVK7 77 aa3.88□□□□□ -1.79
CLK1-210ENST00000473565 JMJD7-PLA2G4BH0Y9G9 81 aa3.88□□□□□ -1.79
CLK1-210ENST00000473565 C3orf84H3BNL1 204 aa3.88□□□□□ -1.79
CLK1-210ENST00000473565 KMT2CQ8NEZ4 4911 aaKnown RBP3.88□□□□□ -1.79
CLK1-210ENST00000473565 DHRS4-AS1Q9P1J3 65 aa3.88□□□□□ -1.79
CLK1-210ENST00000473565 CCKP06307 115 aa3.87□□□□□ -1.79
CLK1-210ENST00000473565 PCP4P48539 62 aa3.87□□□□□ -1.79
CLK1-210ENST00000473565 Q6ZQT0 140 aa3.87□□□□□ -1.79
CLK1-210ENST00000473565 LINC00474Q9P2X8 69 aa3.87□□□□□ -1.79
CLK1-210ENST00000473565 A0A0G2JQZ4 141 aa3.87□□□□□ -1.79
CLK1-210ENST00000473565 LRP1BQ9NZR2 4599 aa3.86□□□□□ -1.79
CLK1-210ENST00000473565 EPM2AB3EWF7 344 aa3.86□□□□□ -1.79
CLK1-210ENST00000473565 DSCR8Q96T75 97 aa3.86□□□□□ -1.79
CLK1-210ENST00000473565 FAM30AQ9NZY2 134 aa3.86□□□□□ -1.79
CLK1-210ENST00000473565 IGKV3D-7A0A0C4DH55 119 aa3.85□□□□□ -1.79
CLK1-210ENST00000473565 ACYP1P07311 99 aa3.85□□□□□ -1.79
CLK1-210ENST00000473565 RYR2Q92736 4967 aa3.85□□□□□ -1.79
CLK1-210ENST00000473565 UBE2AP49459 152 aa3.85□□□□□ -1.79
CLK1-210ENST00000473565 TRBV7-4A0A0J9YYF1 115 aa3.85□□□□□ -1.79
CLK1-210ENST00000473565 PKIGQ9Y2B9 76 aa3.85□□□□□ -1.79
CLK1-210ENST00000473565 IGLV5-48A0A075B6I7 105 aa3.84□□□□□ -1.79
CLK1-210ENST00000473565 LOC110117498A0A087WWA1 95 aa3.84□□□□□ -1.79
CLK1-210ENST00000473565 KRTAP10-1P60331 282 aa3.83□□□□□ -1.8
CLK1-210ENST00000473565 SMIM29Q86T20 159 aa3.83□□□□□ -1.8
CLK1-210ENST00000473565 PSORS1C2Q9UIG4 136 aa3.83□□□□□ -1.8
CLK1-210ENST00000473565 BCE1O60756 84 aa3.83□□□□□ -1.8
CLK1-210ENST00000473565 LINC00643Q86TS7 51 aa3.83□□□□□ -1.8
CLK1-210ENST00000473565 PLAC8Q9NZF1 115 aa3.83□□□□□ -1.8
CLK1-210ENST00000473565 DYNC1H1Q14204 4646 aaKnown RBP3.83□□□□□ -1.8
CLK1-210ENST00000473565 H3BQ85 93 aa3.83□□□□□ -1.8
CLK1-210ENST00000473565 GHRHP01286 108 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms