RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 KCNQ1DNQ9H478 68 aa5.97□□□□□ -1.45
VPS52-216ENST00000471309 DNAH6Q9C0G6 4158 aa5.97□□□□□ -1.45
VPS52-216ENST00000471309 LCE6AA0A183 80 aa5.96□□□□□ -1.46
VPS52-216ENST00000471309 DNAL4O96015 105 aa5.96□□□□□ -1.46
VPS52-216ENST00000471309 CHTF8P0CG12 524 aa5.96□□□□□ -1.46
VPS52-216ENST00000471309 ELOF1P60002 83 aaKnown RBP5.96□□□□□ -1.46
VPS52-216ENST00000471309 ANKRD29Q8N6D5 301 aa5.96□□□□□ -1.46
VPS52-216ENST00000471309 LINC00167Q96N53 147 aa5.96□□□□□ -1.46
VPS52-216ENST00000471309 DNAH2Q9P225 4427 aa5.96□□□□□ -1.46
VPS52-216ENST00000471309 IGLV5-52A0A0A0MRZ9 124 aa5.95□□□□□ -1.46
VPS52-216ENST00000471309 A0A1W2PNN7 141 aa5.95□□□□□ -1.46
VPS52-216ENST00000471309 COX7BP24311 80 aa5.95□□□□□ -1.46
VPS52-216ENST00000471309 LINC00575Q6W349 94 aa5.95□□□□□ -1.46
VPS52-216ENST00000471309 TEN1Q86WV5 123 aa5.95□□□□□ -1.46
VPS52-216ENST00000471309 SPACA4Q8TDM5 124 aa5.95□□□□□ -1.46
VPS52-216ENST00000471309 SNCGO76070 127 aa5.94□□□□□ -1.46
VPS52-216ENST00000471309 SPRR1AP35321 89 aa5.94□□□□□ -1.46
VPS52-216ENST00000471309 RPL37AP8A6NKH3 93 aa5.93□□□□□ -1.46
VPS52-216ENST00000471309 ETDBQ3ZM63 59 aa5.93□□□□□ -1.46
VPS52-216ENST00000471309 DNAH17Q9UFH2 4485 aa5.93□□□□□ -1.46
VPS52-216ENST00000471309 hADV29S1A0JD25 119 aa5.92□□□□□ -1.46
VPS52-216ENST00000471309 EPM2AB3EWF7 344 aa5.92□□□□□ -1.46
VPS52-216ENST00000471309 KRTAP4-16G5E9R7 235 aaPredicted RBP5.92□□□□□ -1.46
VPS52-216ENST00000471309 PANO1I0J062 215 aa5.92□□□□□ -1.46
VPS52-216ENST00000471309 ORMDL1Q9P0S3 153 aa5.92□□□□□ -1.46
VPS52-216ENST00000471309 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.92□□□□□ -1.46
VPS52-216ENST00000471309 BAALC-AS2P0C853 105 aa5.91□□□□□ -1.46
VPS52-216ENST00000471309 OCIAD2Q56VL3 154 aa5.91□□□□□ -1.46
VPS52-216ENST00000471309 LCE2AQ5TA79 106 aaPredicted RBP5.91□□□□□ -1.46
VPS52-216ENST00000471309 REG3GQ6UW15 175 aa5.91□□□□□ -1.46
VPS52-216ENST00000471309 Q6ZRX8 168 aa5.91□□□□□ -1.46
VPS52-216ENST00000471309 BIRC6Q9NR09 4857 aa5.9□□□□□ -1.46
VPS52-216ENST00000471309 ETDCA0A1B0GVM5 59 aa5.9□□□□□ -1.46
VPS52-216ENST00000471309 B5MCH6 92 aa5.9□□□□□ -1.46
VPS52-216ENST00000471309 K7ERU9 68 aa5.9□□□□□ -1.46
VPS52-216ENST00000471309 INAFM2P0DMQ5 153 aa5.9□□□□□ -1.46
VPS52-216ENST00000471309 FUSP35637 526 aaKnown RBP eCLIP5.9□□□□□ -1.46
VPS52-216ENST00000471309 PHF5AQ7RTV0 110 aaKnown RBP5.9□□□□□ -1.46
VPS52-216ENST00000471309 PPDPFLQ8WWR9 84 aa5.9□□□□□ -1.46
VPS52-216ENST00000471309 KMT2AQ03164 3969 aa5.9□□□□□ -1.47
VPS52-216ENST00000471309 EPPK1P58107 5090 aaKnown RBP5.89□□□□□ -1.47
VPS52-216ENST00000471309 HYDINQ4G0P3 5121 aa5.89□□□□□ -1.47
VPS52-216ENST00000471309 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
VPS52-216ENST00000471309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.89□□□□□ -1.47
VPS52-216ENST00000471309 DHRS4-AS1Q9P1J3 65 aa5.89□□□□□ -1.47
VPS52-216ENST00000471309 H3BQ85 93 aa5.88□□□□□ -1.47
VPS52-216ENST00000471309 UBE2BP63146 152 aa5.88□□□□□ -1.47
VPS52-216ENST00000471309 Q6ZQY7 126 aa5.88□□□□□ -1.47
VPS52-216ENST00000471309 LINC00336Q6ZUF6 198 aa5.88□□□□□ -1.47
VPS52-216ENST00000471309 PLAC8Q9NZF1 115 aa5.88□□□□□ -1.47
VPS52-216ENST00000471309 RYR2Q92736 4967 aa5.87□□□□□ -1.47
VPS52-216ENST00000471309 TEX49A0A1B0GTD5 131 aa5.87□□□□□ -1.47
VPS52-216ENST00000471309 J3QR89 54 aa5.87□□□□□ -1.47
VPS52-216ENST00000471309 TMEM256-PLSCR3K7ERE1 68 aa5.87□□□□□ -1.47
VPS52-216ENST00000471309 DPH3Q96FX2 82 aa5.87□□□□□ -1.47
VPS52-216ENST00000471309 KRTAP11-1Q8IUC1 163 aa5.86□□□□□ -1.47
VPS52-216ENST00000471309 Q9BRP9 147 aa5.86□□□□□ -1.47
VPS52-216ENST00000471309 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
VPS52-216ENST00000471309 SACSQ9NZJ4 4579 aa5.85□□□□□ -1.47
VPS52-216ENST00000471309 H0Y9J4 135 aa5.85□□□□□ -1.47
VPS52-216ENST00000471309 FAM19A1Q7Z5A9 133 aa5.85□□□□□ -1.47
VPS52-216ENST00000471309 OBSCN-AS1Q96MR7 158 aa5.85□□□□□ -1.47
VPS52-216ENST00000471309 Q6ZSA8 131 aa5.84□□□□□ -1.47
VPS52-216ENST00000471309 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
VPS52-216ENST00000471309 BCE1O60756 84 aa5.83□□□□□ -1.48
VPS52-216ENST00000471309 PRLHP81277 87 aa5.83□□□□□ -1.48
VPS52-216ENST00000471309 SMCR5Q8TEV8 140 aa5.83□□□□□ -1.48
VPS52-216ENST00000471309 IGLV5-48A0A075B6I7 105 aa5.82□□□□□ -1.48
VPS52-216ENST00000471309 FAM229AH3BQW9 127 aa5.82□□□□□ -1.48
VPS52-216ENST00000471309 KRTAP10-1P60331 282 aa5.82□□□□□ -1.48
VPS52-216ENST00000471309 FAT2Q9NYQ8 4349 aa5.82□□□□□ -1.48
VPS52-216ENST00000471309 DNAH11Q96DT5 4516 aa5.82□□□□□ -1.48
VPS52-216ENST00000471309 KRTAP13-1Q8IUC0 172 aa5.81□□□□□ -1.48
VPS52-216ENST00000471309 FRAS1Q86XX4 4008 aa5.81□□□□□ -1.48
VPS52-216ENST00000471309 DNAH5Q8TE73 4624 aa5.8□□□□□ -1.48
VPS52-216ENST00000471309 FAM240AA0A1B0GVK7 77 aa5.8□□□□□ -1.48
VPS52-216ENST00000471309 A0A1B0GVY2 172 aa5.8□□□□□ -1.48
VPS52-216ENST00000471309 ERC2-IT1O76042 136 aa5.8□□□□□ -1.48
VPS52-216ENST00000471309 UBE2AP49459 152 aa5.8□□□□□ -1.48
VPS52-216ENST00000471309 LINC01547P58512 204 aaPredicted RBP5.8□□□□□ -1.48
VPS52-216ENST00000471309 CIRBP-AS1Q8TBR5 109 aa5.8□□□□□ -1.48
VPS52-216ENST00000471309 FAM30AQ9NZY2 134 aa5.8□□□□□ -1.48
VPS52-216ENST00000471309 LAMTOR3Q9UHA4 124 aa5.8□□□□□ -1.48
VPS52-216ENST00000471309 LORP23490 312 aaPredicted RBP5.79□□□□□ -1.48
VPS52-216ENST00000471309 NDUFV3P56181 108 aaKnown RBP5.79□□□□□ -1.48
VPS52-216ENST00000471309 SCXQ7RTU7 201 aa5.79□□□□□ -1.48
VPS52-216ENST00000471309 ST20-AS1Q8NBB2 130 aa5.79□□□□□ -1.48
VPS52-216ENST00000471309 HIGD2AQ9BW72 106 aa5.79□□□□□ -1.48
VPS52-216ENST00000471309 C14orf132Q9NPU4 83 aa5.79□□□□□ -1.48
VPS52-216ENST00000471309 PSORS1C2Q9UIG4 136 aa5.79□□□□□ -1.48
VPS52-216ENST00000471309 Q8N377 158 aa5.78□□□□□ -1.48
VPS52-216ENST00000471309 LOC110117498A0A087WWA1 95 aa5.77□□□□□ -1.49
VPS52-216ENST00000471309 ACYP1P07311 99 aa5.77□□□□□ -1.49
VPS52-216ENST00000471309 RBM3P98179 157 aaKnown RBP5.77□□□□□ -1.49
VPS52-216ENST00000471309 DEFB105AQ8NG35 78 aa5.77□□□□□ -1.49
VPS52-216ENST00000471309 DNAH8Q96JB1 4490 aa5.76□□□□□ -1.49
VPS52-216ENST00000471309 PKD1P98161 4303 aa5.76□□□□□ -1.49
VPS52-216ENST00000471309 A0A1B0GV72 72 aa5.76□□□□□ -1.49
VPS52-216ENST00000471309 PDE6GP18545 87 aa5.76□□□□□ -1.49
VPS52-216ENST00000471309 SPRR1BP22528 89 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms