RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 A0A1B0GX51 115 aa11.32□□□□□ -0.6
MRPL28-208ENST00000469744 FAM218AQ96MZ4 157 aa11.32□□□□□ -0.6
MRPL28-208ENST00000469744 LINC00528Q8N1L1 170 aa11.32□□□□□ -0.6
MRPL28-208ENST00000469744 LINC00526Q96FQ7 95 aa11.32□□□□□ -0.6
MRPL28-208ENST00000469744 CAMK2N2Q96S95 79 aa11.32□□□□□ -0.6
MRPL28-208ENST00000469744 MYCBP2O75592 4640 aa11.31□□□□□ -0.6
MRPL28-208ENST00000469744 BAALC-AS2P0C853 105 aa11.29□□□□□ -0.6
MRPL28-208ENST00000469744 CIRBP-AS1Q8TBR5 109 aa11.29□□□□□ -0.6
MRPL28-208ENST00000469744 SIGMAR1Q99720 223 aa11.29□□□□□ -0.6
MRPL28-208ENST00000469744 HIGD2BQ4VC39 106 aa11.28□□□□□ -0.6
MRPL28-208ENST00000469744 TEX49A0A1B0GTD5 131 aa11.27□□□□□ -0.6
MRPL28-208ENST00000469744 DNAL4O96015 105 aa11.27□□□□□ -0.6
MRPL28-208ENST00000469744 PRR3P79522 188 aaKnown RBP11.27□□□□□ -0.6
MRPL28-208ENST00000469744 CDIP1Q9H305 208 aa11.26□□□□□ -0.61
MRPL28-208ENST00000469744 PLA2G1BP04054 148 aaKnown RBP11.25□□□□□ -0.61
MRPL28-208ENST00000469744 S100A7L2Q5SY68 101 aa11.25□□□□□ -0.61
MRPL28-208ENST00000469744 Q6ZRU5 148 aa11.25□□□□□ -0.61
MRPL28-208ENST00000469744 Q8NDZ9 215 aa11.25□□□□□ -0.61
MRPL28-208ENST00000469744 LINC00167Q96N53 147 aa11.25□□□□□ -0.61
MRPL28-208ENST00000469744 A0A087WYN8 130 aa11.25□□□□□ -0.61
MRPL28-208ENST00000469744 NDUFC2-KCTD14E9PQ53 114 aa11.25□□□□□ -0.61
MRPL28-208ENST00000469744 NCR3O14931 201 aa11.25□□□□□ -0.61
MRPL28-208ENST00000469744 IGLV6-57P01721 117 aa11.25□□□□□ -0.61
MRPL28-208ENST00000469744 C9orf163Q8N9P6 203 aa11.25□□□□□ -0.61
MRPL28-208ENST00000469744 HERC1Q15751 4861 aa11.24□□□□□ -0.61
MRPL28-208ENST00000469744 FAM240AA0A1B0GVK7 77 aa11.24□□□□□ -0.61
MRPL28-208ENST00000469744 SYCNQ0VAF6 134 aa11.24□□□□□ -0.61
MRPL28-208ENST00000469744 PANO1I0J062 215 aa11.23□□□□□ -0.61
MRPL28-208ENST00000469744 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.23□□□□□ -0.61
MRPL28-208ENST00000469744 SNCGO76070 127 aa11.22□□□□□ -0.61
MRPL28-208ENST00000469744 SLPIP03973 132 aa11.22□□□□□ -0.61
MRPL28-208ENST00000469744 SCGB1A1P11684 91 aa11.22□□□□□ -0.61
MRPL28-208ENST00000469744 C22orf24Q9Y442 160 aa11.22□□□□□ -0.61
MRPL28-208ENST00000469744 TLX1NBP0CAT3 122 aa11.21□□□□□ -0.61
MRPL28-208ENST00000469744 CNBPP62633 177 aaKnown RBP11.2□□□□□ -0.62
MRPL28-208ENST00000469744 SDIM1Q6ZPB5 146 aa11.2□□□□□ -0.62
MRPL28-208ENST00000469744 VPREB1P12018 145 aa11.19□□□□□ -0.62
MRPL28-208ENST00000469744 PCP4P48539 62 aa11.19□□□□□ -0.62
MRPL28-208ENST00000469744 RPL18AQ02543 176 aaKnown RBP11.19□□□□□ -0.62
MRPL28-208ENST00000469744 ACYP1P07311 99 aa11.19□□□□□ -0.62
MRPL28-208ENST00000469744 KRTAP10-4P60372 401 aaPredicted RBP11.19□□□□□ -0.62
MRPL28-208ENST00000469744 C6orf99Q4VX62 202 aa11.19□□□□□ -0.62
MRPL28-208ENST00000469744 XAGE1AQ9HD64 81 aa11.19□□□□□ -0.62
MRPL28-208ENST00000469744 ORMDL1Q9P0S3 153 aa11.19□□□□□ -0.62
MRPL28-208ENST00000469744 M0R378 163 aa11.18□□□□□ -0.62
MRPL28-208ENST00000469744 TRBV7-6A0A0J9YX20 115 aa11.17□□□□□ -0.62
MRPL28-208ENST00000469744 OBSCN-AS1Q96MR7 158 aa11.17□□□□□ -0.62
MRPL28-208ENST00000469744 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
MRPL28-208ENST00000469744 LINC00575Q6W349 94 aa11.16□□□□□ -0.62
MRPL28-208ENST00000469744 PLA2G2DQ9UNK4 145 aa11.16□□□□□ -0.62
MRPL28-208ENST00000469744 H3BQ85 93 aa11.15□□□□□ -0.62
MRPL28-208ENST00000469744 TRAV23DV6A0A075B6W5 121 aa11.14□□□□□ -0.63
MRPL28-208ENST00000469744 TRBV10-3A0A0K0K1G6 114 aa11.14□□□□□ -0.63
MRPL28-208ENST00000469744 Q6ZRP5 223 aa11.13□□□□□ -0.63
MRPL28-208ENST00000469744 DIRC1Q969H9 104 aa11.13□□□□□ -0.63
MRPL28-208ENST00000469744 TMEM256-PLSCR3K7ERE1 68 aa11.12□□□□□ -0.63
MRPL28-208ENST00000469744 RPL37AP61513 92 aaKnown RBP11.12□□□□□ -0.63
MRPL28-208ENST00000469744 J3QL48 77 aa11.12□□□□□ -0.63
MRPL28-208ENST00000469744 GAGE2EQ4V326 116 aa11.12□□□□□ -0.63
MRPL28-208ENST00000469744 DPH3Q96FX2 82 aa11.12□□□□□ -0.63
MRPL28-208ENST00000469744 GAGE2DQ9UEU5 116 aa11.12□□□□□ -0.63
MRPL28-208ENST00000469744 hADV29S1A0JD25 119 aa11.11□□□□□ -0.63
MRPL28-208ENST00000469744 C9orf129Q5T035 196 aaKnown RBP11.1□□□□□ -0.63
MRPL28-208ENST00000469744 SPACA4Q8TDM5 124 aa11.1□□□□□ -0.63
MRPL28-208ENST00000469744 IGLV5-37A0A075B6J1 123 aa11.09□□□□□ -0.63
MRPL28-208ENST00000469744 JMJD7-PLA2G4BH0Y9G9 81 aa11.09□□□□□ -0.63
MRPL28-208ENST00000469744 ZNF73O43830 326 aaPredicted RBP11.09□□□□□ -0.63
MRPL28-208ENST00000469744 MT-ATP8P03928 68 aa11.09□□□□□ -0.63
MRPL28-208ENST00000469744 LRP1Q07954 4544 aaKnown RBP11.08□□□□□ -0.64
MRPL28-208ENST00000469744 IGKV2-24A0A0C4DH68 120 aa11.07□□□□□ -0.64
MRPL28-208ENST00000469744 GHRHP01286 108 aa11.07□□□□□ -0.64
MRPL28-208ENST00000469744 COX7BP24311 80 aa11.07□□□□□ -0.64
MRPL28-208ENST00000469744 KRTAP29-1A8MX34 341 aaPredicted RBP11.06□□□□□ -0.64
MRPL28-208ENST00000469744 ELOF1P60002 83 aaKnown RBP11.06□□□□□ -0.64
MRPL28-208ENST00000469744 LOC107984640A0A0U1RRK4 108 aa11.05□□□□□ -0.64
MRPL28-208ENST00000469744 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.05□□□□□ -0.64
MRPL28-208ENST00000469744 NKAPP1Q8N9T2 125 aa11.05□□□□□ -0.64
MRPL28-208ENST00000469744 A0A096LNI7 61 aa11.04□□□□□ -0.64
MRPL28-208ENST00000469744 Q6Q795 121 aa11.04□□□□□ -0.64
MRPL28-208ENST00000469744 KCNQ1DNQ9H478 68 aa11.03□□□□□ -0.64
MRPL28-208ENST00000469744 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
MRPL28-208ENST00000469744 SERTAD4-AS1Q5TG53 156 aa11□□□□□ -0.65
MRPL28-208ENST00000469744 LINC00643Q86TS7 51 aa11□□□□□ -0.65
MRPL28-208ENST00000469744 C7orf33Q8WU49 177 aa11□□□□□ -0.65
MRPL28-208ENST00000469744 C14orf132Q9NPU4 83 aa11□□□□□ -0.65
MRPL28-208ENST00000469744 PKHD1L1Q86WI1 4243 aa11□□□□□ -0.65
MRPL28-208ENST00000469744 GAGE2AQ6NT46 116 aa11□□□□□ -0.65
MRPL28-208ENST00000469744 FAT3Q8TDW7 4589 aa10.99□□□□□ -0.65
MRPL28-208ENST00000469744 PRYO14603 147 aa10.99□□□□□ -0.65
MRPL28-208ENST00000469744 CCKP06307 115 aa10.99□□□□□ -0.65
MRPL28-208ENST00000469744 Q6ZQY7 126 aa10.98□□□□□ -0.65
MRPL28-208ENST00000469744 OXTP01178 125 aa10.97□□□□□ -0.65
MRPL28-208ENST00000469744 GAGE2BQ13066 116 aa10.97□□□□□ -0.65
MRPL28-208ENST00000469744 TRBV7-7A0A0K0K1E9 115 aa10.96□□□□□ -0.65
MRPL28-208ENST00000469744 C21orf62-AS1Q17RA5 79 aa10.96□□□□□ -0.65
MRPL28-208ENST00000469744 IMUPQ9GZP8 106 aa10.96□□□□□ -0.65
MRPL28-208ENST00000469744 PKIGQ9Y2B9 76 aa10.96□□□□□ -0.65
MRPL28-208ENST00000469744 IGLV1-50A0A075B6I6 118 aa10.94□□□□□ -0.66
MRPL28-208ENST00000469744 SPRR1AP35321 89 aa10.94□□□□□ -0.66
MRPL28-208ENST00000469744 LOC110117498A0A087WWA1 95 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms