RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 VPREB1P12018 145 aa3.39□□□□□ -1.87
HLA-DPA3-207ENST00000454398 FABP2P12104 132 aa3.39□□□□□ -1.87
HLA-DPA3-207ENST00000454398 NMUP48645 174 aa3.39□□□□□ -1.87
HLA-DPA3-207ENST00000454398 LINC01545Q5VT33 79 aa3.39□□□□□ -1.87
HLA-DPA3-207ENST00000454398 FAM19A3Q7Z5A8 133 aa3.39□□□□□ -1.87
HLA-DPA3-207ENST00000454398 Q8NBF4 154 aa3.39□□□□□ -1.87
HLA-DPA3-207ENST00000454398 TOMM6Q96B49 74 aa3.39□□□□□ -1.87
HLA-DPA3-207ENST00000454398 ZNF625Q96I27 306 aaPredicted RBP3.39□□□□□ -1.87
HLA-DPA3-207ENST00000454398 SND1-IT1Q9HBX3 110 aa3.39□□□□□ -1.87
HLA-DPA3-207ENST00000454398 IGLV5-45A0A087WSX0 123 aa3.38□□□□□ -1.87
HLA-DPA3-207ENST00000454398 A0A1W2PPM0 123 aa3.38□□□□□ -1.87
HLA-DPA3-207ENST00000454398 PLEKHB2Q96CS7 222 aa3.38□□□□□ -1.87
HLA-DPA3-207ENST00000454398 SCGB3A1Q96QR1 104 aa3.38□□□□□ -1.87
HLA-DPA3-207ENST00000454398 TIMM17AQ99595 171 aa3.38□□□□□ -1.87
HLA-DPA3-207ENST00000454398 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
HLA-DPA3-207ENST00000454398 A0A0U1RRA0 63 aa3.37□□□□□ -1.87
HLA-DPA3-207ENST00000454398 A0A1B0GV72 72 aa3.37□□□□□ -1.87
HLA-DPA3-207ENST00000454398 TINCRA0A1B0GVN0 87 aa3.37□□□□□ -1.87
HLA-DPA3-207ENST00000454398 K7ERJ3 54 aa3.37□□□□□ -1.87
HLA-DPA3-207ENST00000454398 ATP5LO75964 103 aa3.37□□□□□ -1.87
HLA-DPA3-207ENST00000454398 SMIM13P0DJ93 91 aa3.37□□□□□ -1.87
HLA-DPA3-207ENST00000454398 LINC01547P58512 204 aaPredicted RBP3.37□□□□□ -1.87
HLA-DPA3-207ENST00000454398 ASB16-AS1Q495Z4 193 aa3.37□□□□□ -1.87
HLA-DPA3-207ENST00000454398 SPRR4Q96PI1 79 aa3.37□□□□□ -1.87
HLA-DPA3-207ENST00000454398 NXT2Q9NPJ8 142 aaKnown RBP3.37□□□□□ -1.87
HLA-DPA3-207ENST00000454398 NCR3O14931 201 aa3.36□□□□□ -1.87
HLA-DPA3-207ENST00000454398 HBDP02042 147 aa3.36□□□□□ -1.87
HLA-DPA3-207ENST00000454398 SCGB1A1P11684 91 aa3.36□□□□□ -1.87
HLA-DPA3-207ENST00000454398 BOD1L2Q8IYS8 172 aa3.36□□□□□ -1.87
HLA-DPA3-207ENST00000454398 LINC00337Q8N6G1 96 aa3.36□□□□□ -1.87
HLA-DPA3-207ENST00000454398 SIGMAR1Q99720 223 aa3.36□□□□□ -1.87
HLA-DPA3-207ENST00000454398 ERG28Q9UKR5 140 aa3.36□□□□□ -1.87
HLA-DPA3-207ENST00000454398 IGLV5-39A0A0G2JS06 123 aa3.35□□□□□ -1.87
HLA-DPA3-207ENST00000454398 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
HLA-DPA3-207ENST00000454398 J3QR89 54 aa3.35□□□□□ -1.87
HLA-DPA3-207ENST00000454398 ZNF22P17026 224 aaPredicted RBP3.35□□□□□ -1.87
HLA-DPA3-207ENST00000454398 FXYD2P54710 66 aa3.35□□□□□ -1.87
HLA-DPA3-207ENST00000454398 MOBPQ13875 183 aa3.35□□□□□ -1.87
HLA-DPA3-207ENST00000454398 PAPPA-AS1Q5QFB9 102 aa3.35□□□□□ -1.87
HLA-DPA3-207ENST00000454398 PCP2Q8IVA1 136 aa3.35□□□□□ -1.87
HLA-DPA3-207ENST00000454398 IFI27L1Q96BM0 104 aa3.35□□□□□ -1.87
HLA-DPA3-207ENST00000454398 NHP2Q9NX24 153 aaKnown RBP3.35□□□□□ -1.87
HLA-DPA3-207ENST00000454398 IGLV9-49A0A0B4J1Y8 123 aa3.34□□□□□ -1.87
HLA-DPA3-207ENST00000454398 C11orf86A6NJI1 115 aa3.34□□□□□ -1.87
HLA-DPA3-207ENST00000454398 PMVKQ15126 192 aa3.34□□□□□ -1.87
HLA-DPA3-207ENST00000454398 FP248Q71RG6 208 aaPredicted RBP3.34□□□□□ -1.87
HLA-DPA3-207ENST00000454398 A0A096LNJ9 63 aa3.33□□□□□ -1.88
HLA-DPA3-207ENST00000454398 K7EMI3 77 aa3.33□□□□□ -1.88
HLA-DPA3-207ENST00000454398 IGKCP01834 107 aa3.33□□□□□ -1.88
HLA-DPA3-207ENST00000454398 MTURNQ8N3F0 131 aa3.33□□□□□ -1.88
HLA-DPA3-207ENST00000454398 TTTY13Q9BZ97 58 aa3.33□□□□□ -1.88
HLA-DPA3-207ENST00000454398 A0A1B0GWB2 263 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 ERC2-IT1O76042 136 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 DPM2O94777 84 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 LINC00158P58513 81 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 SEC61BP60468 96 aaKnown RBP3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 MT1HP80294 61 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 C4orf48Q5BLP8 95 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 TMEM170BQ5T4T1 132 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 XP32Q5T750 250 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 GAGE2AQ6NT46 116 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 CEND1Q8N111 149 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 Q8N377 158 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 SMCR5Q8TEV8 140 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 HIST1H4GQ99525 98 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 SPANXB1Q9NS25 103 aaPredicted RBP3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 HIGD1BQ9P298 99 aa3.32□□□□□ -1.88
HLA-DPA3-207ENST00000454398 TRBV10-3A0A0K0K1G6 114 aa3.31□□□□□ -1.88
HLA-DPA3-207ENST00000454398 A4D1N5 150 aa3.31□□□□□ -1.88
HLA-DPA3-207ENST00000454398 SPAG11AQ6PDA7 123 aa3.31□□□□□ -1.88
HLA-DPA3-207ENST00000454398 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
HLA-DPA3-207ENST00000454398 ETDCA0A1B0GVM5 59 aa3.3□□□□□ -1.88
HLA-DPA3-207ENST00000454398 LINC01546A6NGU7 62 aa3.3□□□□□ -1.88
HLA-DPA3-207ENST00000454398 E9PLD3 99 aa3.3□□□□□ -1.88
HLA-DPA3-207ENST00000454398 F8W1H4 67 aa3.3□□□□□ -1.88
HLA-DPA3-207ENST00000454398 H3BMG7 143 aa3.3□□□□□ -1.88
HLA-DPA3-207ENST00000454398 PRYO14603 147 aa3.3□□□□□ -1.88
HLA-DPA3-207ENST00000454398 TAL2Q16559 108 aa3.3□□□□□ -1.88
HLA-DPA3-207ENST00000454398 ETDBQ3ZM63 59 aa3.3□□□□□ -1.88
HLA-DPA3-207ENST00000454398 C9orf153Q5TBE3 101 aa3.3□□□□□ -1.88
HLA-DPA3-207ENST00000454398 C9orf92A6NGG3 77 aa3.29□□□□□ -1.88
HLA-DPA3-207ENST00000454398 KRTAP4-16G5E9R7 235 aaPredicted RBP3.29□□□□□ -1.88
HLA-DPA3-207ENST00000454398 SPINK1P00995 79 aa3.29□□□□□ -1.88
HLA-DPA3-207ENST00000454398 LORP23490 312 aaPredicted RBP3.29□□□□□ -1.88
HLA-DPA3-207ENST00000454398 PSMB2P49721 201 aa3.29□□□□□ -1.88
HLA-DPA3-207ENST00000454398 LINC00483Q53H64 154 aa3.29□□□□□ -1.88
HLA-DPA3-207ENST00000454398 PCOTHQ58A44 107 aa3.29□□□□□ -1.88
HLA-DPA3-207ENST00000454398 MEIG1Q5JSS6 88 aa3.29□□□□□ -1.88
HLA-DPA3-207ENST00000454398 MIR7-3HGQ8N6C7 128 aa3.29□□□□□ -1.88
HLA-DPA3-207ENST00000454398 Q9BRP9 147 aa3.29□□□□□ -1.88
HLA-DPA3-207ENST00000454398 NDUFA12Q9UI09 145 aa3.29□□□□□ -1.88
HLA-DPA3-207ENST00000454398 IGLV8-61A0A075B6I0 122 aa3.28□□□□□ -1.88
HLA-DPA3-207ENST00000454398 LOC107984156A0A0G2JMH3 177 aa3.28□□□□□ -1.88
HLA-DPA3-207ENST00000454398 MT-ATP8P03928 68 aa3.28□□□□□ -1.88
HLA-DPA3-207ENST00000454398 SPRR1AP35321 89 aa3.28□□□□□ -1.88
HLA-DPA3-207ENST00000454398 TSPEAR-AS2P59090 65 aa3.28□□□□□ -1.88
HLA-DPA3-207ENST00000454398 COX17Q14061 63 aa3.28□□□□□ -1.88
HLA-DPA3-207ENST00000454398 LYRM7Q5U5X0 104 aa3.28□□□□□ -1.88
HLA-DPA3-207ENST00000454398 SFTA2Q6UW10 78 aa3.28□□□□□ -1.88
HLA-DPA3-207ENST00000454398 HRCT1Q6UXD1 115 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms