RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 HSPG2P98160 4391 aa9.37□□□□□ -0.91
TNFRSF1A-204ENST00000440083 TRAV23DV6A0A075B6W5 121 aa9.36□□□□□ -0.91
TNFRSF1A-204ENST00000440083 J3QR89 54 aa9.36□□□□□ -0.91
TNFRSF1A-204ENST00000440083 GAGE2BQ13066 116 aa9.36□□□□□ -0.91
TNFRSF1A-204ENST00000440083 TEN1Q86WV5 123 aa9.36□□□□□ -0.91
TNFRSF1A-204ENST00000440083 PKIGQ9Y2B9 76 aa9.36□□□□□ -0.91
TNFRSF1A-204ENST00000440083 SNCGO76070 127 aa9.35□□□□□ -0.91
TNFRSF1A-204ENST00000440083 CNBPP62633 177 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-204ENST00000440083 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
TNFRSF1A-204ENST00000440083 C9orf129Q5T035 196 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-204ENST00000440083 FAM218AQ96MZ4 157 aa9.35□□□□□ -0.91
TNFRSF1A-204ENST00000440083 TRBV10-3A0A0K0K1G6 114 aa9.34□□□□□ -0.91
TNFRSF1A-204ENST00000440083 DIRC1Q969H9 104 aa9.34□□□□□ -0.91
TNFRSF1A-204ENST00000440083 PLA2G2DQ9UNK4 145 aa9.34□□□□□ -0.91
TNFRSF1A-204ENST00000440083 A0A087WYN8 130 aa9.33□□□□□ -0.92
TNFRSF1A-204ENST00000440083 A0A1B0GX51 115 aa9.33□□□□□ -0.92
TNFRSF1A-204ENST00000440083 PPDPFLQ8WWR9 84 aa9.33□□□□□ -0.92
TNFRSF1A-204ENST00000440083 LINC01600Q96MT4 127 aa9.32□□□□□ -0.92
TNFRSF1A-204ENST00000440083 HAMPP81172 84 aa9.31□□□□□ -0.92
TNFRSF1A-204ENST00000440083 SERTAD4-AS1Q5TG53 156 aa9.3□□□□□ -0.92
TNFRSF1A-204ENST00000440083 IGLV5-37A0A075B6J1 123 aa9.29□□□□□ -0.92
TNFRSF1A-204ENST00000440083 ZNF73O43830 326 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF1A-204ENST00000440083 BAALC-AS2P0C853 105 aa9.29□□□□□ -0.92
TNFRSF1A-204ENST00000440083 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
TNFRSF1A-204ENST00000440083 COX7BP24311 80 aa9.28□□□□□ -0.92
TNFRSF1A-204ENST00000440083 FAM19A5Q7Z5A7 132 aaPredicted RBP9.28□□□□□ -0.92
TNFRSF1A-204ENST00000440083 C7orf33Q8WU49 177 aa9.28□□□□□ -0.92
TNFRSF1A-204ENST00000440083 CDK2AP2O75956 126 aa9.27□□□□□ -0.93
TNFRSF1A-204ENST00000440083 ORMDL1Q9P0S3 153 aa9.27□□□□□ -0.93
TNFRSF1A-204ENST00000440083 FAT1Q14517 4588 aa9.26□□□□□ -0.93
TNFRSF1A-204ENST00000440083 A0A096LNI7 61 aa9.26□□□□□ -0.93
TNFRSF1A-204ENST00000440083 IGKV2-24A0A0C4DH68 120 aa9.26□□□□□ -0.93
TNFRSF1A-204ENST00000440083 TRBV7-6A0A0J9YX20 115 aa9.26□□□□□ -0.93
TNFRSF1A-204ENST00000440083 FAM168BA1KXE4 195 aa9.26□□□□□ -0.93
TNFRSF1A-204ENST00000440083 XGP55808 180 aa9.26□□□□□ -0.93
TNFRSF1A-204ENST00000440083 LINC00575Q6W349 94 aa9.26□□□□□ -0.93
TNFRSF1A-204ENST00000440083 hADV29S1A0JD25 119 aa9.25□□□□□ -0.93
TNFRSF1A-204ENST00000440083 PRYO14603 147 aa9.25□□□□□ -0.93
TNFRSF1A-204ENST00000440083 MRPL55Q7Z7F7 128 aaKnown RBP9.24□□□□□ -0.93
TNFRSF1A-204ENST00000440083 C9orf163Q8N9P6 203 aa9.24□□□□□ -0.93
TNFRSF1A-204ENST00000440083 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
TNFRSF1A-204ENST00000440083 VPS25Q9BRG1 176 aa9.24□□□□□ -0.93
TNFRSF1A-204ENST00000440083 C22orf24Q9Y442 160 aa9.24□□□□□ -0.93
TNFRSF1A-204ENST00000440083 ELOF1P60002 83 aaKnown RBP9.23□□□□□ -0.93
TNFRSF1A-204ENST00000440083 Q6ZSA8 131 aa9.23□□□□□ -0.93
TNFRSF1A-204ENST00000440083 TEX49A0A1B0GTD5 131 aa9.22□□□□□ -0.93
TNFRSF1A-204ENST00000440083 PANO1I0J062 215 aa9.22□□□□□ -0.93
TNFRSF1A-204ENST00000440083 KCNQ1DNQ9H478 68 aa9.22□□□□□ -0.93
TNFRSF1A-204ENST00000440083 LINC00474Q9P2X8 69 aa9.21□□□□□ -0.94
TNFRSF1A-204ENST00000440083 RPL37AP8A6NKH3 93 aa9.2□□□□□ -0.94
TNFRSF1A-204ENST00000440083 H3BQ85 93 aa9.2□□□□□ -0.94
TNFRSF1A-204ENST00000440083 GHRHP01286 108 aa9.2□□□□□ -0.94
TNFRSF1A-204ENST00000440083 INAFM2P0DMQ5 153 aa9.2□□□□□ -0.94
TNFRSF1A-204ENST00000440083 SDIM1Q6ZPB5 146 aa9.2□□□□□ -0.94
TNFRSF1A-204ENST00000440083 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-204ENST00000440083 IGLV1-50A0A075B6I6 118 aa9.19□□□□□ -0.94
TNFRSF1A-204ENST00000440083 ETDCA0A1B0GVM5 59 aa9.19□□□□□ -0.94
TNFRSF1A-204ENST00000440083 TMEM256-PLSCR3K7ERE1 68 aa9.19□□□□□ -0.94
TNFRSF1A-204ENST00000440083 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
TNFRSF1A-204ENST00000440083 ABCA13Q86UQ4 5058 aa9.18□□□□□ -0.94
TNFRSF1A-204ENST00000440083 PCLOQ9Y6V0 5065 aa9.18□□□□□ -0.94
TNFRSF1A-204ENST00000440083 SMR3BP02814 79 aaPredicted RBP9.18□□□□□ -0.94
TNFRSF1A-204ENST00000440083 SCXQ7RTU7 201 aa9.18□□□□□ -0.94
TNFRSF1A-204ENST00000440083 LINC00528Q8N1L1 170 aa9.18□□□□□ -0.94
TNFRSF1A-204ENST00000440083 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.17□□□□□ -0.94
TNFRSF1A-204ENST00000440083 Q6ZQY7 126 aa9.17□□□□□ -0.94
TNFRSF1A-204ENST00000440083 KRTAP7-1Q8IUC3 87 aa9.17□□□□□ -0.94
TNFRSF1A-204ENST00000440083 KRTAP4-5Q9BYR2 181 aa9.17□□□□□ -0.94
TNFRSF1A-204ENST00000440083 VPS13BQ7Z7G8 4022 aa9.15□□□□□ -0.94
TNFRSF1A-204ENST00000440083 A0A1W2PNN7 141 aa9.15□□□□□ -0.94
TNFRSF1A-204ENST00000440083 UBE2BP63146 152 aa9.15□□□□□ -0.94
TNFRSF1A-204ENST00000440083 REG3GQ6UW15 175 aa9.15□□□□□ -0.94
TNFRSF1A-204ENST00000440083 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
TNFRSF1A-204ENST00000440083 SPRR1AP35321 89 aa9.14□□□□□ -0.95
TNFRSF1A-204ENST00000440083 Q8N1X5 172 aa9.14□□□□□ -0.95
TNFRSF1A-204ENST00000440083 DHRS4-AS1Q9P1J3 65 aa9.14□□□□□ -0.95
TNFRSF1A-204ENST00000440083 JMJD7-PLA2G4BH0Y9G9 81 aa9.13□□□□□ -0.95
TNFRSF1A-204ENST00000440083 SPACA4Q8TDM5 124 aa9.13□□□□□ -0.95
TNFRSF1A-204ENST00000440083 DPH3Q96FX2 82 aa9.13□□□□□ -0.95
TNFRSF1A-204ENST00000440083 B5MCH6 92 aa9.12□□□□□ -0.95
TNFRSF1A-204ENST00000440083 Q6ZRX8 168 aa9.12□□□□□ -0.95
TNFRSF1A-204ENST00000440083 LAMTOR3Q9UHA4 124 aa9.11□□□□□ -0.95
TNFRSF1A-204ENST00000440083 A0A1B0GV72 72 aa9.1□□□□□ -0.95
TNFRSF1A-204ENST00000440083 FAM240AA0A1B0GVK7 77 aa9.1□□□□□ -0.95
TNFRSF1A-204ENST00000440083 PHF5AQ7RTV0 110 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-204ENST00000440083 OBSCN-AS1Q96MR7 158 aa9.1□□□□□ -0.95
TNFRSF1A-204ENST00000440083 C14orf132Q9NPU4 83 aa9.1□□□□□ -0.95
TNFRSF1A-204ENST00000440083 KRTAP4-16G5E9R7 235 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-204ENST00000440083 Q5VSD8 79 aa9.09□□□□□ -0.95
TNFRSF1A-204ENST00000440083 SRRM2Q9UQ35 2752 aaKnown RBP9.09□□□□□ -0.95
TNFRSF1A-204ENST00000440083 ACYP1P07311 99 aa9.08□□□□□ -0.96
TNFRSF1A-204ENST00000440083 GAGE2AQ6NT46 116 aa9.08□□□□□ -0.96
TNFRSF1A-204ENST00000440083 FAM19A1Q7Z5A9 133 aa9.08□□□□□ -0.96
TNFRSF1A-204ENST00000440083 EPM2AB3EWF7 344 aa9.07□□□□□ -0.96
TNFRSF1A-204ENST00000440083 RBM3P98179 157 aaKnown RBP9.05□□□□□ -0.96
TNFRSF1A-204ENST00000440083 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
TNFRSF1A-204ENST00000440083 PLAC8Q9NZF1 115 aa9.05□□□□□ -0.96
TNFRSF1A-204ENST00000440083 Q9BRP9 147 aa9.04□□□□□ -0.96
TNFRSF1A-204ENST00000440083 FAM229AH3BQW9 127 aa9.03□□□□□ -0.96
TNFRSF1A-204ENST00000440083 NDUFV3P56181 108 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms