RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 Q6ZQT0 140 aa9.14□□□□□ -0.95
PTCHD3-201ENST00000438700 LAMTOR3Q9UHA4 124 aa9.14□□□□□ -0.95
PTCHD3-201ENST00000438700 RBM3P98179 157 aaKnown RBP9.13□□□□□ -0.95
PTCHD3-201ENST00000438700 PRKDCP78527 4128 aaKnown RBP9.13□□□□□ -0.95
PTCHD3-201ENST00000438700 MEGF8Q7Z7M0 2845 aa9.13□□□□□ -0.95
PTCHD3-201ENST00000438700 ATP5EP2Q5VTU8 51 aa9.12□□□□□ -0.95
PTCHD3-201ENST00000438700 SNURFQ9Y675 71 aa9.12□□□□□ -0.95
PTCHD3-201ENST00000438700 LINC01547P58512 204 aaPredicted RBP9.11□□□□□ -0.95
PTCHD3-201ENST00000438700 NDUFC2-KCTD14E9PQ53 114 aa9.11□□□□□ -0.95
PTCHD3-201ENST00000438700 VPREB1P12018 145 aa9.11□□□□□ -0.95
PTCHD3-201ENST00000438700 Q6ZQY7 126 aa9.11□□□□□ -0.95
PTCHD3-201ENST00000438700 DIRC1Q969H9 104 aa9.11□□□□□ -0.95
PTCHD3-201ENST00000438700 SCXQ7RTU7 201 aa9.1□□□□□ -0.95
PTCHD3-201ENST00000438700 ZNF73O43830 326 aaPredicted RBP9.1□□□□□ -0.95
PTCHD3-201ENST00000438700 Q6ZRP5 223 aa9.1□□□□□ -0.95
PTCHD3-201ENST00000438700 Q6ZVQ6 151 aa9.1□□□□□ -0.95
PTCHD3-201ENST00000438700 H7BZZ5 65 aa9.09□□□□□ -0.95
PTCHD3-201ENST00000438700 RMI2Q96E14 147 aa9.09□□□□□ -0.95
PTCHD3-201ENST00000438700 APLNQ9ULZ1 77 aa9.08□□□□□ -0.96
PTCHD3-201ENST00000438700 FAM236DA0A1B0GTK5 79 aa9.08□□□□□ -0.96
PTCHD3-201ENST00000438700 FAM236CP0DP71 79 aa9.08□□□□□ -0.96
PTCHD3-201ENST00000438700 SYCNQ0VAF6 134 aa9.07□□□□□ -0.96
PTCHD3-201ENST00000438700 CSMD3Q7Z407 3707 aa9.07□□□□□ -0.96
PTCHD3-201ENST00000438700 LYSTQ99698 3801 aa9.07□□□□□ -0.96
PTCHD3-201ENST00000438700 COX7BP24311 80 aa9.06□□□□□ -0.96
PTCHD3-201ENST00000438700 DYNC2H1Q8NCM8 4307 aaKnown RBP9.06□□□□□ -0.96
PTCHD3-201ENST00000438700 M0R378 163 aa9.05□□□□□ -0.96
PTCHD3-201ENST00000438700 CASC10Q5T4H9 136 aa9.05□□□□□ -0.96
PTCHD3-201ENST00000438700 UBE2DNLQ8IWF7 75 aa9.05□□□□□ -0.96
PTCHD3-201ENST00000438700 LOC110117498A0A087WWA1 95 aa9.05□□□□□ -0.96
PTCHD3-201ENST00000438700 TRAV7A0A075B6U4 112 aa9.04□□□□□ -0.96
PTCHD3-201ENST00000438700 ELOF1P60002 83 aaKnown RBP9.04□□□□□ -0.96
PTCHD3-201ENST00000438700 NUPR2A6NF83 97 aa9.04□□□□□ -0.96
PTCHD3-201ENST00000438700 DNAH1Q9P2D7 4330 aa9.04□□□□□ -0.96
PTCHD3-201ENST00000438700 TENM2Q9NT68 2774 aa9.03□□□□□ -0.96
PTCHD3-201ENST00000438700 F8WEM9 126 aa9.02□□□□□ -0.97
PTCHD3-201ENST00000438700 KRTAP1-5Q9BYS1 174 aa9.02□□□□□ -0.97
PTCHD3-201ENST00000438700 SERTAD4-AS1Q5TG53 156 aa9.01□□□□□ -0.97
PTCHD3-201ENST00000438700 Q8N9L7 120 aa9.01□□□□□ -0.97
PTCHD3-201ENST00000438700 KLKP1Q107X0 134 aa9□□□□□ -0.97
PTCHD3-201ENST00000438700 NKAPP1Q8N9T2 125 aa9□□□□□ -0.97
PTCHD3-201ENST00000438700 DNAH7Q8WXX0 4024 aa8.99□□□□□ -0.97
PTCHD3-201ENST00000438700 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.99□□□□□ -0.97
PTCHD3-201ENST00000438700 PLECQ15149 4684 aaKnown RBP8.99□□□□□ -0.97
PTCHD3-201ENST00000438700 FBN3Q75N90 2809 aa8.99□□□□□ -0.97
PTCHD3-201ENST00000438700 EPM2AB3EWF7 344 aa8.98□□□□□ -0.97
PTCHD3-201ENST00000438700 F8WDY8 70 aa8.98□□□□□ -0.97
PTCHD3-201ENST00000438700 LINC00528Q8N1L1 170 aa8.98□□□□□ -0.97
PTCHD3-201ENST00000438700 TRBV7-6A0A0J9YX20 115 aa8.98□□□□□ -0.97
PTCHD3-201ENST00000438700 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
PTCHD3-201ENST00000438700 LINC00336Q6ZUF6 198 aa8.98□□□□□ -0.97
PTCHD3-201ENST00000438700 SERP1Q9Y6X1 66 aa8.98□□□□□ -0.97
PTCHD3-201ENST00000438700 FP248Q71RG6 208 aaPredicted RBP8.97□□□□□ -0.97
PTCHD3-201ENST00000438700 STARD9Q9P2P6 4700 aa8.97□□□□□ -0.97
PTCHD3-201ENST00000438700 C7orf33Q8WU49 177 aa8.97□□□□□ -0.97
PTCHD3-201ENST00000438700 LINC00474Q9P2X8 69 aa8.97□□□□□ -0.97
PTCHD3-201ENST00000438700 TRBV7-4A0A0J9YYF1 115 aa8.96□□□□□ -0.97
PTCHD3-201ENST00000438700 RPL37AP8A6NKH3 93 aa8.96□□□□□ -0.97
PTCHD3-201ENST00000438700 CXCL6P80162 114 aa8.96□□□□□ -0.98
PTCHD3-201ENST00000438700 H3BQ85 93 aa8.94□□□□□ -0.98
PTCHD3-201ENST00000438700 TLX1NBP0CAT3 122 aa8.93□□□□□ -0.98
PTCHD3-201ENST00000438700 KCNQ1DNQ9H478 68 aa8.93□□□□□ -0.98
PTCHD3-201ENST00000438700 BCE1O60756 84 aa8.93□□□□□ -0.98
PTCHD3-201ENST00000438700 DNAH10Q8IVF4 4471 aa8.92□□□□□ -0.98
PTCHD3-201ENST00000438700 DEFB105AQ8NG35 78 aa8.92□□□□□ -0.98
PTCHD3-201ENST00000438700 BPY2O14599 106 aa8.91□□□□□ -0.98
PTCHD3-201ENST00000438700 PSCAO43653 123 aa8.91□□□□□ -0.98
PTCHD3-201ENST00000438700 PDE6GP18545 87 aa8.91□□□□□ -0.98
PTCHD3-201ENST00000438700 NREPQ16612 68 aa8.91□□□□□ -0.98
PTCHD3-201ENST00000438700 KRTAP7-1Q8IUC3 87 aa8.91□□□□□ -0.98
PTCHD3-201ENST00000438700 NBDYA0A0U1RRE5 68 aa8.9□□□□□ -0.98
PTCHD3-201ENST00000438700 C3orf84H3BNL1 204 aa8.89□□□□□ -0.99
PTCHD3-201ENST00000438700 FAM229BQ4G0N7 80 aa8.89□□□□□ -0.99
PTCHD3-201ENST00000438700 TMEM254Q8TBM7 123 aa8.88□□□□□ -0.99
PTCHD3-201ENST00000438700 IGLV1-50A0A075B6I6 118 aa8.87□□□□□ -0.99
PTCHD3-201ENST00000438700 PLA2G2DQ9UNK4 145 aa8.87□□□□□ -0.99
PTCHD3-201ENST00000438700 TGP01266 2768 aa8.87□□□□□ -0.99
PTCHD3-201ENST00000438700 SMIM26A0A096LP01 95 aa8.87□□□□□ -0.99
PTCHD3-201ENST00000438700 Q6ZRX8 168 aa8.87□□□□□ -0.99
PTCHD3-201ENST00000438700 IGKV4-1P06312 121 aa8.86□□□□□ -0.99
PTCHD3-201ENST00000438700 Q9BRP9 147 aa8.86□□□□□ -0.99
PTCHD3-201ENST00000438700 VPS13DQ5THJ4 4388 aa8.86□□□□□ -0.99
PTCHD3-201ENST00000438700 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
PTCHD3-201ENST00000438700 ETDCA0A1B0GVM5 59 aa8.85□□□□□ -0.99
PTCHD3-201ENST00000438700 Q8N377 158 aa8.85□□□□□ -0.99
PTCHD3-201ENST00000438700 KRTAP4-16G5E9R7 235 aaPredicted RBP8.85□□□□□ -0.99
PTCHD3-201ENST00000438700 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
PTCHD3-201ENST00000438700 IGKV2-24A0A0C4DH68 120 aa8.84□□□□□ -0.99
PTCHD3-201ENST00000438700 PRYO14603 147 aa8.84□□□□□ -0.99
PTCHD3-201ENST00000438700 MPLKIPQ8TAP9 179 aa8.84□□□□□ -0.99
PTCHD3-201ENST00000438700 ST20-AS1Q8NBB2 130 aa8.83□□□□□ -1
PTCHD3-201ENST00000438700 PRO0628Q9UI54 55 aa8.83□□□□□ -1
PTCHD3-201ENST00000438700 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.82□□□□□ -1
PTCHD3-201ENST00000438700 Q6ZRN7 208 aaPredicted RBP8.82□□□□□ -1
PTCHD3-201ENST00000438700 HIGD2AQ9BW72 106 aa8.82□□□□□ -1
PTCHD3-201ENST00000438700 OCR1Q9BZK8 76 aa8.82□□□□□ -1
PTCHD3-201ENST00000438700 DHRS4-AS1Q9P1J3 65 aa8.82□□□□□ -1
PTCHD3-201ENST00000438700 SPRR1AP35321 89 aa8.82□□□□□ -1
PTCHD3-201ENST00000438700 PKIGQ9Y2B9 76 aa8.82□□□□□ -1
PTCHD3-201ENST00000438700 CNBPP62633 177 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms