RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 MT-ATP8P03928 68 aa5.81□□□□□ -1.48
LINCMD1-201ENST00000418518 DNAH2Q9P225 4427 aa5.81□□□□□ -1.48
LINCMD1-201ENST00000418518 TENM2Q9NT68 2774 aa5.8□□□□□ -1.48
LINCMD1-201ENST00000418518 IGLV1-50A0A075B6I6 118 aa5.8□□□□□ -1.48
LINCMD1-201ENST00000418518 GAGE2BQ13066 116 aa5.8□□□□□ -1.48
LINCMD1-201ENST00000418518 Q6ZQY7 126 aa5.8□□□□□ -1.48
LINCMD1-201ENST00000418518 PKIGQ9Y2B9 76 aa5.8□□□□□ -1.48
LINCMD1-201ENST00000418518 FAM168BA1KXE4 195 aa5.79□□□□□ -1.48
LINCMD1-201ENST00000418518 GHRHP01286 108 aa5.79□□□□□ -1.48
LINCMD1-201ENST00000418518 PCP4P48539 62 aa5.79□□□□□ -1.48
LINCMD1-201ENST00000418518 C14orf132Q9NPU4 83 aa5.79□□□□□ -1.48
LINCMD1-201ENST00000418518 A0A096LNI7 61 aa5.78□□□□□ -1.48
LINCMD1-201ENST00000418518 Q6Q795 121 aa5.78□□□□□ -1.48
LINCMD1-201ENST00000418518 Q6ZR54 194 aa5.78□□□□□ -1.48
LINCMD1-201ENST00000418518 MRPL55Q7Z7F7 128 aaKnown RBP5.78□□□□□ -1.48
LINCMD1-201ENST00000418518 C9orf163Q8N9P6 203 aa5.78□□□□□ -1.48
LINCMD1-201ENST00000418518 LOC110117498A0A087WWA1 95 aa5.77□□□□□ -1.49
LINCMD1-201ENST00000418518 CCKP06307 115 aa5.77□□□□□ -1.49
LINCMD1-201ENST00000418518 Q6ZRX8 168 aa5.77□□□□□ -1.49
LINCMD1-201ENST00000418518 TRBV7-7A0A0K0K1E9 115 aa5.76□□□□□ -1.49
LINCMD1-201ENST00000418518 B5MCH6 92 aa5.76□□□□□ -1.49
LINCMD1-201ENST00000418518 C21orf62-AS1Q17RA5 79 aa5.76□□□□□ -1.49
LINCMD1-201ENST00000418518 GAGE2AQ6NT46 116 aa5.76□□□□□ -1.49
LINCMD1-201ENST00000418518 LINC00643Q86TS7 51 aa5.76□□□□□ -1.49
LINCMD1-201ENST00000418518 SMCR5Q8TEV8 140 aa5.76□□□□□ -1.49
LINCMD1-201ENST00000418518 DHRS4-AS1Q9P1J3 65 aa5.76□□□□□ -1.49
LINCMD1-201ENST00000418518 FBN3Q75N90 2809 aa5.76□□□□□ -1.49
LINCMD1-201ENST00000418518 PDE6GP18545 87 aa5.75□□□□□ -1.49
LINCMD1-201ENST00000418518 FAM19A5Q7Z5A7 132 aaPredicted RBP5.75□□□□□ -1.49
LINCMD1-201ENST00000418518 HECTD4Q9Y4D8 3996 aa5.74□□□□□ -1.49
LINCMD1-201ENST00000418518 EPM2AB3EWF7 344 aa5.74□□□□□ -1.49
LINCMD1-201ENST00000418518 RBM3P98179 157 aaKnown RBP5.74□□□□□ -1.49
LINCMD1-201ENST00000418518 Q6ZQT0 140 aa5.74□□□□□ -1.49
LINCMD1-201ENST00000418518 IMUPQ9GZP8 106 aa5.74□□□□□ -1.49
LINCMD1-201ENST00000418518 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.73□□□□□ -1.49
LINCMD1-201ENST00000418518 TRBV7-4A0A0J9YYF1 115 aa5.73□□□□□ -1.49
LINCMD1-201ENST00000418518 ETDCA0A1B0GVM5 59 aa5.73□□□□□ -1.49
LINCMD1-201ENST00000418518 A0A1W2PNN7 141 aa5.73□□□□□ -1.49
LINCMD1-201ENST00000418518 RPL37AP8A6NKH3 93 aa5.73□□□□□ -1.49
LINCMD1-201ENST00000418518 LINC01547P58512 204 aaPredicted RBP5.73□□□□□ -1.49
LINCMD1-201ENST00000418518 Q9BRP9 147 aa5.73□□□□□ -1.49
LINCMD1-201ENST00000418518 KMT2AQ03164 3969 aa5.73□□□□□ -1.49
LINCMD1-201ENST00000418518 IGLV5-48A0A075B6I7 105 aa5.72□□□□□ -1.49
LINCMD1-201ENST00000418518 A0A087WTM6 91 aa5.72□□□□□ -1.49
LINCMD1-201ENST00000418518 NDUFV3P56181 108 aaKnown RBP5.72□□□□□ -1.49
LINCMD1-201ENST00000418518 REG3GQ6UW15 175 aa5.72□□□□□ -1.49
LINCMD1-201ENST00000418518 LINC00846Q9NV44 126 aa5.72□□□□□ -1.49
LINCMD1-201ENST00000418518 LINC00474Q9P2X8 69 aa5.72□□□□□ -1.49
LINCMD1-201ENST00000418518 LAMTOR3Q9UHA4 124 aa5.72□□□□□ -1.49
LINCMD1-201ENST00000418518 IGKV2-24A0A0C4DH68 120 aa5.71□□□□□ -1.5
LINCMD1-201ENST00000418518 Q6JHZ5 121 aa5.71□□□□□ -1.5
LINCMD1-201ENST00000418518 Q8N377 158 aa5.7□□□□□ -1.5
LINCMD1-201ENST00000418518 WWC2-AS2Q96NR7 200 aa5.7□□□□□ -1.5
LINCMD1-201ENST00000418518 DSCR8Q96T75 97 aa5.7□□□□□ -1.5
LINCMD1-201ENST00000418518 DNAH8Q96JB1 4490 aa5.7□□□□□ -1.5
LINCMD1-201ENST00000418518 H0Y9J4 135 aa5.69□□□□□ -1.5
LINCMD1-201ENST00000418518 M0R2N4 97 aa5.69□□□□□ -1.5
LINCMD1-201ENST00000418518 CHTF8P0CG12 524 aa5.69□□□□□ -1.5
LINCMD1-201ENST00000418518 TNP2Q05952 138 aa5.69□□□□□ -1.5
LINCMD1-201ENST00000418518 ATP5EP2Q5VTU8 51 aa5.69□□□□□ -1.5
LINCMD1-201ENST00000418518 A0A1B0GV72 72 aa5.68□□□□□ -1.5
LINCMD1-201ENST00000418518 SPACA4Q8TDM5 124 aa5.68□□□□□ -1.5
LINCMD1-201ENST00000418518 FRAS1Q86XX4 4008 aa5.68□□□□□ -1.5
LINCMD1-201ENST00000418518 DNAH11Q96DT5 4516 aa5.67□□□□□ -1.5
LINCMD1-201ENST00000418518 C1orf134Q5TEV5 83 aa5.67□□□□□ -1.5
LINCMD1-201ENST00000418518 LINC00476Q8WZB0 136 aa5.67□□□□□ -1.5
LINCMD1-201ENST00000418518 TGP01266 2768 aa5.67□□□□□ -1.5
LINCMD1-201ENST00000418518 PANO1I0J062 215 aa5.66□□□□□ -1.5
LINCMD1-201ENST00000418518 ERC2-IT1O76042 136 aa5.66□□□□□ -1.5
LINCMD1-201ENST00000418518 PHF5AQ7RTV0 110 aaKnown RBP5.66□□□□□ -1.5
LINCMD1-201ENST00000418518 DNAH5Q8TE73 4624 aa5.65□□□□□ -1.5
LINCMD1-201ENST00000418518 A0A1B0GW54 56 aa5.65□□□□□ -1.5
LINCMD1-201ENST00000418518 RTL8CO15255 209 aa5.65□□□□□ -1.5
LINCMD1-201ENST00000418518 UBE2BP63146 152 aa5.65□□□□□ -1.5
LINCMD1-201ENST00000418518 KRTAP11-1Q8IUC1 163 aa5.65□□□□□ -1.5
LINCMD1-201ENST00000418518 C3orf84H3BNL1 204 aa5.64□□□□□ -1.51
LINCMD1-201ENST00000418518 HIST1H4AP62805 103 aaKnown RBP5.64□□□□□ -1.51
LINCMD1-201ENST00000418518 FAM19A1Q7Z5A9 133 aa5.64□□□□□ -1.51
LINCMD1-201ENST00000418518 KRTAP13-1Q8IUC0 172 aa5.64□□□□□ -1.51
LINCMD1-201ENST00000418518 ST20-AS1Q8NBB2 130 aa5.64□□□□□ -1.51
LINCMD1-201ENST00000418518 UBL5Q9BZL1 73 aa5.64□□□□□ -1.51
LINCMD1-201ENST00000418518 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.64□□□□□ -1.51
LINCMD1-201ENST00000418518 IGLV8-61A0A075B6I0 122 aa5.63□□□□□ -1.51
LINCMD1-201ENST00000418518 SPRR1BP22528 89 aa5.63□□□□□ -1.51
LINCMD1-201ENST00000418518 SMIM29Q86T20 159 aa5.63□□□□□ -1.51
LINCMD1-201ENST00000418518 BCE1O60756 84 aa5.62□□□□□ -1.51
LINCMD1-201ENST00000418518 LY6G6CO95867 125 aa5.62□□□□□ -1.51
LINCMD1-201ENST00000418518 PRLHP81277 87 aa5.62□□□□□ -1.51
LINCMD1-201ENST00000418518 Q6ZVQ6 151 aa5.62□□□□□ -1.51
LINCMD1-201ENST00000418518 PLAC8Q9NZF1 115 aa5.62□□□□□ -1.51
LINCMD1-201ENST00000418518 IGKV3D-7A0A0C4DH55 119 aa5.61□□□□□ -1.51
LINCMD1-201ENST00000418518 DEFB105AQ8NG35 78 aa5.61□□□□□ -1.51
LINCMD1-201ENST00000418518 FAT2Q9NYQ8 4349 aa5.61□□□□□ -1.51
LINCMD1-201ENST00000418518 FAM236AA0A1B0GUQ0 79 aa5.6□□□□□ -1.51
LINCMD1-201ENST00000418518 FAM236BA0A1B0GV22 79 aa5.6□□□□□ -1.51
LINCMD1-201ENST00000418518 CXCL6P80162 114 aa5.6□□□□□ -1.51
LINCMD1-201ENST00000418518 Q8NBF4 154 aa5.6□□□□□ -1.51
LINCMD1-201ENST00000418518 SPRR4Q96PI1 79 aa5.6□□□□□ -1.51
LINCMD1-201ENST00000418518 ANAPC13Q9BS18 74 aa5.6□□□□□ -1.51
LINCMD1-201ENST00000418518 IGLV5-52A0A0A0MRZ9 124 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 243.1 ms