RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ACYP1P07311 99 aa9.57□□□□□ -0.88
CAPN3-207ENST00000397200 TRBV7-6A0A0J9YX20 115 aa9.56□□□□□ -0.88
CAPN3-207ENST00000397200 A0A1B0GVY2 172 aa9.56□□□□□ -0.88
CAPN3-207ENST00000397200 MT-ATP8P03928 68 aa9.56□□□□□ -0.88
CAPN3-207ENST00000397200 C9orf129Q5T035 196 aaKnown RBP9.56□□□□□ -0.88
CAPN3-207ENST00000397200 C9orf163Q8N9P6 203 aa9.56□□□□□ -0.88
CAPN3-207ENST00000397200 PLA2G2DQ9UNK4 145 aa9.56□□□□□ -0.88
CAPN3-207ENST00000397200 HECTD4Q9Y4D8 3996 aa9.56□□□□□ -0.88
CAPN3-207ENST00000397200 DIRC1Q969H9 104 aa9.56□□□□□ -0.88
CAPN3-207ENST00000397200 GAGE2EQ4V326 116 aa9.54□□□□□ -0.88
CAPN3-207ENST00000397200 GAGE2DQ9UEU5 116 aa9.54□□□□□ -0.88
CAPN3-207ENST00000397200 PKIGQ9Y2B9 76 aa9.54□□□□□ -0.88
CAPN3-207ENST00000397200 DNAH11Q96DT5 4516 aa9.54□□□□□ -0.88
CAPN3-207ENST00000397200 PKD1P98161 4303 aa9.53□□□□□ -0.88
CAPN3-207ENST00000397200 LOC107984640A0A0U1RRK4 108 aa9.53□□□□□ -0.88
CAPN3-207ENST00000397200 ZNF73O43830 326 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-207ENST00000397200 SNCGO76070 127 aa9.53□□□□□ -0.88
CAPN3-207ENST00000397200 SDIM1Q6ZPB5 146 aa9.53□□□□□ -0.88
CAPN3-207ENST00000397200 IGLV5-37A0A075B6J1 123 aa9.53□□□□□ -0.88
CAPN3-207ENST00000397200 hADV29S1A0JD25 119 aa9.53□□□□□ -0.88
CAPN3-207ENST00000397200 TMEM256-PLSCR3K7ERE1 68 aa9.53□□□□□ -0.88
CAPN3-207ENST00000397200 ELOF1P60002 83 aaKnown RBP9.53□□□□□ -0.88
CAPN3-207ENST00000397200 H3BQ85 93 aa9.49□□□□□ -0.89
CAPN3-207ENST00000397200 COX7BP24311 80 aa9.49□□□□□ -0.89
CAPN3-207ENST00000397200 GAGE2BQ13066 116 aa9.49□□□□□ -0.89
CAPN3-207ENST00000397200 C21orf62-AS1Q17RA5 79 aa9.49□□□□□ -0.89
CAPN3-207ENST00000397200 SERTAD4-AS1Q5TG53 156 aa9.49□□□□□ -0.89
CAPN3-207ENST00000397200 JMJD7-PLA2G4BH0Y9G9 81 aa9.49□□□□□ -0.89
CAPN3-207ENST00000397200 C16orf90A8MZG2 172 aa9.48□□□□□ -0.89
CAPN3-207ENST00000397200 KCNQ1DNQ9H478 68 aa9.48□□□□□ -0.89
CAPN3-207ENST00000397200 C14orf132Q9NPU4 83 aa9.48□□□□□ -0.89
CAPN3-207ENST00000397200 DNAH5Q8TE73 4624 aa9.47□□□□□ -0.89
CAPN3-207ENST00000397200 A0A096LNI7 61 aa9.47□□□□□ -0.89
CAPN3-207ENST00000397200 IGKV2-24A0A0C4DH68 120 aa9.47□□□□□ -0.89
CAPN3-207ENST00000397200 Q6Q795 121 aa9.47□□□□□ -0.89
CAPN3-207ENST00000397200 LINC00528Q8N1L1 170 aa9.47□□□□□ -0.89
CAPN3-207ENST00000397200 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.46□□□□□ -0.89
CAPN3-207ENST00000397200 NKAPP1Q8N9T2 125 aa9.46□□□□□ -0.89
CAPN3-207ENST00000397200 C7orf33Q8WU49 177 aa9.46□□□□□ -0.89
CAPN3-207ENST00000397200 SMCR5Q8TEV8 140 aa9.45□□□□□ -0.9
CAPN3-207ENST00000397200 LINC00474Q9P2X8 69 aa9.45□□□□□ -0.9
CAPN3-207ENST00000397200 CHTF8P0CG12 524 aa9.45□□□□□ -0.9
CAPN3-207ENST00000397200 KRTAP10-1P60331 282 aa9.45□□□□□ -0.9
CAPN3-207ENST00000397200 GAGE2AQ6NT46 116 aa9.45□□□□□ -0.9
CAPN3-207ENST00000397200 Q6ZQY7 126 aa9.45□□□□□ -0.9
CAPN3-207ENST00000397200 KRTAP7-1Q8IUC3 87 aa9.45□□□□□ -0.9
CAPN3-207ENST00000397200 TRBV7-7A0A0K0K1E9 115 aa9.43□□□□□ -0.9
CAPN3-207ENST00000397200 LINC00643Q86TS7 51 aa9.43□□□□□ -0.9
CAPN3-207ENST00000397200 PRYO14603 147 aa9.42□□□□□ -0.9
CAPN3-207ENST00000397200 CCKP06307 115 aa9.42□□□□□ -0.9
CAPN3-207ENST00000397200 DPH3Q96FX2 82 aa9.42□□□□□ -0.9
CAPN3-207ENST00000397200 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-207ENST00000397200 FAM168BA1KXE4 195 aa9.42□□□□□ -0.9
CAPN3-207ENST00000397200 GHRHP01286 108 aa9.42□□□□□ -0.9
CAPN3-207ENST00000397200 SPRR1AP35321 89 aa9.42□□□□□ -0.9
CAPN3-207ENST00000397200 SPACA4Q8TDM5 124 aa9.42□□□□□ -0.9
CAPN3-207ENST00000397200 PKHD1P08F94 4074 aa9.41□□□□□ -0.9
CAPN3-207ENST00000397200 KRTAP4-16G5E9R7 235 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-207ENST00000397200 PANO1I0J062 215 aa9.41□□□□□ -0.9
CAPN3-207ENST00000397200 IGLV1-50A0A075B6I6 118 aa9.4□□□□□ -0.9
CAPN3-207ENST00000397200 LOC110117498A0A087WWA1 95 aa9.4□□□□□ -0.9
CAPN3-207ENST00000397200 IMUPQ9GZP8 106 aa9.39□□□□□ -0.91
CAPN3-207ENST00000397200 FAM30AQ9NZY2 134 aa9.39□□□□□ -0.91
CAPN3-207ENST00000397200 Q6ZSA8 131 aa9.38□□□□□ -0.91
CAPN3-207ENST00000397200 RBM3P98179 157 aaKnown RBP9.37□□□□□ -0.91
CAPN3-207ENST00000397200 Q6ZQT0 140 aa9.37□□□□□ -0.91
CAPN3-207ENST00000397200 FAM19A5Q7Z5A7 132 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-207ENST00000397200 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
CAPN3-207ENST00000397200 LINC00846Q9NV44 126 aa9.37□□□□□ -0.91
CAPN3-207ENST00000397200 A0A1W2PNN7 141 aa9.36□□□□□ -0.91
CAPN3-207ENST00000397200 A0A1B0GV72 72 aa9.35□□□□□ -0.91
CAPN3-207ENST00000397200 B5MCH6 92 aa9.35□□□□□ -0.91
CAPN3-207ENST00000397200 Q6ZRX8 168 aa9.35□□□□□ -0.91
CAPN3-207ENST00000397200 DYNC1H1Q14204 4646 aaKnown RBP9.35□□□□□ -0.91
CAPN3-207ENST00000397200 LAMTOR3Q9UHA4 124 aa9.34□□□□□ -0.91
CAPN3-207ENST00000397200 PDE6GP18545 87 aa9.34□□□□□ -0.91
CAPN3-207ENST00000397200 Q6JHZ5 121 aa9.34□□□□□ -0.91
CAPN3-207ENST00000397200 PLAC8Q9NZF1 115 aa9.34□□□□□ -0.91
CAPN3-207ENST00000397200 DHRS4-AS1Q9P1J3 65 aa9.34□□□□□ -0.91
CAPN3-207ENST00000397200 DNAH8Q96JB1 4490 aa9.34□□□□□ -0.91
CAPN3-207ENST00000397200 LRP1BQ9NZR2 4599 aa9.33□□□□□ -0.92
CAPN3-207ENST00000397200 TRBV7-4A0A0J9YYF1 115 aa9.33□□□□□ -0.92
CAPN3-207ENST00000397200 RPL37AP8A6NKH3 93 aa9.33□□□□□ -0.92
CAPN3-207ENST00000397200 SCXQ7RTU7 201 aa9.33□□□□□ -0.92
CAPN3-207ENST00000397200 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
CAPN3-207ENST00000397200 EPPK1P58107 5090 aaKnown RBP9.33□□□□□ -0.92
CAPN3-207ENST00000397200 NDUFV3P56181 108 aaKnown RBP9.31□□□□□ -0.92
CAPN3-207ENST00000397200 HAMPP81172 84 aa9.31□□□□□ -0.92
CAPN3-207ENST00000397200 Q9BRP9 147 aa9.31□□□□□ -0.92
CAPN3-207ENST00000397200 EPM2AB3EWF7 344 aa9.31□□□□□ -0.92
CAPN3-207ENST00000397200 LINC01547P58512 204 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-207ENST00000397200 DSCR8Q96T75 97 aa9.31□□□□□ -0.92
CAPN3-207ENST00000397200 ETDCA0A1B0GVM5 59 aa9.3□□□□□ -0.92
CAPN3-207ENST00000397200 PHF5AQ7RTV0 110 aaKnown RBP9.29□□□□□ -0.92
CAPN3-207ENST00000397200 IGLV5-48A0A075B6I7 105 aa9.28□□□□□ -0.92
CAPN3-207ENST00000397200 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
CAPN3-207ENST00000397200 Q8N377 158 aa9.27□□□□□ -0.92
CAPN3-207ENST00000397200 ATP5EP2Q5VTU8 51 aa9.27□□□□□ -0.93
CAPN3-207ENST00000397200 UBE2BP63146 152 aa9.26□□□□□ -0.93
CAPN3-207ENST00000397200 CDK2AP2O75956 126 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms