RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 IGKV2-24A0A0C4DH68 120 aa14.16□□□□□ -0.14
HMGA2-203ENST00000393578 RPL37AP8A6NKH3 93 aa14.16□□□□□ -0.14
HMGA2-203ENST00000393578 PRYO14603 147 aa14.16□□□□□ -0.14
HMGA2-203ENST00000393578 Q6ZQY7 126 aa14.16□□□□□ -0.14
HMGA2-203ENST00000393578 H3BQ85 93 aa14.16□□□□□ -0.14
HMGA2-203ENST00000393578 TGP01266 2768 aa14.15□□□□□ -0.14
HMGA2-203ENST00000393578 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.15□□□□□ -0.14
HMGA2-203ENST00000393578 SIGMAR1Q99720 223 aa14.14□□□□□ -0.15
HMGA2-203ENST00000393578 JMJD7-PLA2G4BH0Y9G9 81 aa14.13□□□□□ -0.15
HMGA2-203ENST00000393578 SPRR1AP35321 89 aa14.13□□□□□ -0.15
HMGA2-203ENST00000393578 A0A087WTM6 91 aa14.12□□□□□ -0.15
HMGA2-203ENST00000393578 GHRHP01286 108 aa14.11□□□□□ -0.15
HMGA2-203ENST00000393578 ACYP1P07311 99 aa14.11□□□□□ -0.15
HMGA2-203ENST00000393578 C14orf132Q9NPU4 83 aa14.11□□□□□ -0.15
HMGA2-203ENST00000393578 A0A1W2PNN7 141 aa14.11□□□□□ -0.15
HMGA2-203ENST00000393578 KRTAP4-16G5E9R7 235 aaPredicted RBP14.11□□□□□ -0.15
HMGA2-203ENST00000393578 LY6G6CO95867 125 aa14.11□□□□□ -0.15
HMGA2-203ENST00000393578 SDIM1Q6ZPB5 146 aa14.1□□□□□ -0.15
HMGA2-203ENST00000393578 Q6ZRX8 168 aa14.08□□□□□ -0.16
HMGA2-203ENST00000393578 LINC00474Q9P2X8 69 aa14.08□□□□□ -0.16
HMGA2-203ENST00000393578 C1orf134Q5TEV5 83 aa14.07□□□□□ -0.16
HMGA2-203ENST00000393578 KMT2AQ03164 3969 aa14.07□□□□□ -0.16
HMGA2-203ENST00000393578 ETDCA0A1B0GVM5 59 aa14.07□□□□□ -0.16
HMGA2-203ENST00000393578 B5MCH6 92 aa14.07□□□□□ -0.16
HMGA2-203ENST00000393578 CHTF8P0CG12 524 aa14.07□□□□□ -0.16
HMGA2-203ENST00000393578 LINC00476Q8WZB0 136 aa14.07□□□□□ -0.16
HMGA2-203ENST00000393578 XGP55808 180 aa14.06□□□□□ -0.16
HMGA2-203ENST00000393578 GAGE2AQ6NT46 116 aa14.05□□□□□ -0.16
HMGA2-203ENST00000393578 DHRS4-AS1Q9P1J3 65 aa14.05□□□□□ -0.16
HMGA2-203ENST00000393578 A0A1B0GV72 72 aa14.05□□□□□ -0.16
HMGA2-203ENST00000393578 REG3GQ6UW15 175 aa14.04□□□□□ -0.16
HMGA2-203ENST00000393578 LAMTOR3Q9UHA4 124 aa14.03□□□□□ -0.16
HMGA2-203ENST00000393578 C3orf84H3BNL1 204 aa14.02□□□□□ -0.16
HMGA2-203ENST00000393578 MT-ATP8P03928 68 aa14.01□□□□□ -0.17
HMGA2-203ENST00000393578 RBM3P98179 157 aaKnown RBP14□□□□□ -0.17
HMGA2-203ENST00000393578 Q9BRP9 147 aa14□□□□□ -0.17
HMGA2-203ENST00000393578 CCKP06307 115 aa13.99□□□□□ -0.17
HMGA2-203ENST00000393578 DNAH2Q9P225 4427 aa13.98□□□□□ -0.17
HMGA2-203ENST00000393578 DNAH6Q9C0G6 4158 aa13.98□□□□□ -0.17
HMGA2-203ENST00000393578 RTL8CO15255 209 aa13.97□□□□□ -0.17
HMGA2-203ENST00000393578 PANO1I0J062 215 aa13.96□□□□□ -0.18
HMGA2-203ENST00000393578 PHF5AQ7RTV0 110 aaKnown RBP13.96□□□□□ -0.18
HMGA2-203ENST00000393578 SPACA4Q8TDM5 124 aa13.95□□□□□ -0.18
HMGA2-203ENST00000393578 LOC110117498A0A087WWA1 95 aa13.94□□□□□ -0.18
HMGA2-203ENST00000393578 NDUFV3P56181 108 aaKnown RBP13.94□□□□□ -0.18
HMGA2-203ENST00000393578 ALMS1Q8TCU4 4167 aa13.94□□□□□ -0.18
HMGA2-203ENST00000393578 UBE2BP63146 152 aa13.93□□□□□ -0.18
HMGA2-203ENST00000393578 DPH3Q96FX2 82 aa13.93□□□□□ -0.18
HMGA2-203ENST00000393578 DSCR8Q96T75 97 aa13.93□□□□□ -0.18
HMGA2-203ENST00000393578 Q6ZQT0 140 aa13.92□□□□□ -0.18
HMGA2-203ENST00000393578 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.92□□□□□ -0.18
HMGA2-203ENST00000393578 PDE6GP18545 87 aa13.91□□□□□ -0.18
HMGA2-203ENST00000393578 SMCR5Q8TEV8 140 aa13.91□□□□□ -0.18
HMGA2-203ENST00000393578 EPM2AB3EWF7 344 aa13.91□□□□□ -0.18
HMGA2-203ENST00000393578 Q8N377 158 aa13.91□□□□□ -0.18
HMGA2-203ENST00000393578 DEFB105AQ8NG35 78 aa13.91□□□□□ -0.18
HMGA2-203ENST00000393578 SCGB1A1P11684 91 aa13.9□□□□□ -0.18
HMGA2-203ENST00000393578 FUSP35637 526 aaKnown RBP eCLIP13.9□□□□□ -0.185e-7■■■■□ 23.7
HMGA2-203ENST00000393578 LINC01547P58512 204 aaPredicted RBP13.9□□□□□ -0.18
HMGA2-203ENST00000393578 FAM19A1Q7Z5A9 133 aa13.9□□□□□ -0.18
HMGA2-203ENST00000393578 LINC00643Q86TS7 51 aa13.89□□□□□ -0.19
HMGA2-203ENST00000393578 IGLV5-52A0A0A0MRZ9 124 aa13.89□□□□□ -0.19
HMGA2-203ENST00000393578 KRTAP11-1Q8IUC1 163 aa13.89□□□□□ -0.19
HMGA2-203ENST00000393578 HECTD4Q9Y4D8 3996 aa13.88□□□□□ -0.19
HMGA2-203ENST00000393578 IGLV5-48A0A075B6I7 105 aa13.88□□□□□ -0.19
HMGA2-203ENST00000393578 ERC2-IT1O76042 136 aa13.88□□□□□ -0.19
HMGA2-203ENST00000393578 PCP4P48539 62 aa13.88□□□□□ -0.19
HMGA2-203ENST00000393578 LINC00846Q9NV44 126 aa13.88□□□□□ -0.19
HMGA2-203ENST00000393578 TRBV7-4A0A0J9YYF1 115 aa13.87□□□□□ -0.19
HMGA2-203ENST00000393578 TNP2Q05952 138 aa13.87□□□□□ -0.19
HMGA2-203ENST00000393578 ST20-AS1Q8NBB2 130 aa13.85□□□□□ -0.19
HMGA2-203ENST00000393578 PRLHP81277 87 aa13.85□□□□□ -0.19
HMGA2-203ENST00000393578 DNAH17Q9UFH2 4485 aa13.85□□□□□ -0.19
HMGA2-203ENST00000393578 H0Y9J4 135 aa13.84□□□□□ -0.19
HMGA2-203ENST00000393578 C21orf62-AS1Q17RA5 79 aa13.82□□□□□ -0.2
HMGA2-203ENST00000393578 Q6Q795 121 aa13.8□□□□□ -0.2
HMGA2-203ENST00000393578 HIGD2AQ9BW72 106 aa13.8□□□□□ -0.2
HMGA2-203ENST00000393578 TRBV7-7A0A0K0K1E9 115 aa13.79□□□□□ -0.2
HMGA2-203ENST00000393578 PLAC8Q9NZF1 115 aa13.79□□□□□ -0.2
HMGA2-203ENST00000393578 BCE1O60756 84 aa13.78□□□□□ -0.2
HMGA2-203ENST00000393578 C3orf22Q8N5N4 141 aa13.77□□□□□ -0.21
HMGA2-203ENST00000393578 FRAS1Q86XX4 4008 aa13.77□□□□□ -0.21
HMGA2-203ENST00000393578 UBE2AP49459 152 aa13.76□□□□□ -0.21
HMGA2-203ENST00000393578 IMUPQ9GZP8 106 aa13.75□□□□□ -0.21
HMGA2-203ENST00000393578 UBL5Q9BZL1 73 aa13.74□□□□□ -0.21
HMGA2-203ENST00000393578 Q6JHZ5 121 aa13.73□□□□□ -0.21
HMGA2-203ENST00000393578 HYDINQ4G0P3 5121 aa13.72□□□□□ -0.21
HMGA2-203ENST00000393578 KRTAP10-2P60368 255 aa13.72□□□□□ -0.21
HMGA2-203ENST00000393578 KRTAP13-1Q8IUC0 172 aa13.72□□□□□ -0.21
HMGA2-203ENST00000393578 SMIM29Q86T20 159 aa13.71□□□□□ -0.21
HMGA2-203ENST00000393578 C1orf137Q5JT78 98 aa13.67□□□□□ -0.22
HMGA2-203ENST00000393578 ATP5EP2Q5VTU8 51 aa13.67□□□□□ -0.22
HMGA2-203ENST00000393578 F8WEM9 126 aa13.65□□□□□ -0.22
HMGA2-203ENST00000393578 DNAH11Q96DT5 4516 aa13.65□□□□□ -0.22
HMGA2-203ENST00000393578 IGKV3D-7A0A0C4DH55 119 aa13.65□□□□□ -0.22
HMGA2-203ENST00000393578 SPRR1BP22528 89 aa13.65□□□□□ -0.22
HMGA2-203ENST00000393578 PSORS1C2Q9UIG4 136 aa13.65□□□□□ -0.22
HMGA2-203ENST00000393578 Q6ZVQ6 151 aa13.64□□□□□ -0.23
HMGA2-203ENST00000393578 A0A1B0GW54 56 aa13.62□□□□□ -0.23
HMGA2-203ENST00000393578 FAT2Q9NYQ8 4349 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms