RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 Q6ZRN7 208 aaPredicted RBP6.47□□□□□ -1.37
LTN1-203ENST00000389195 M0QXV9 152 aa6.47□□□□□ -1.37
LTN1-203ENST00000389195 ST20-AS1Q8NBB2 130 aa6.47□□□□□ -1.37
LTN1-203ENST00000389195 LAMTOR3Q9UHA4 124 aa6.47□□□□□ -1.37
LTN1-203ENST00000389195 A0A0G2JQZ4 141 aa6.46□□□□□ -1.38
LTN1-203ENST00000389195 PHF5AQ7RTV0 110 aaKnown RBP6.46□□□□□ -1.38
LTN1-203ENST00000389195 DNAH17Q9UFH2 4485 aa6.46□□□□□ -1.38
LTN1-203ENST00000389195 DNAH11Q96DT5 4516 aa6.46□□□□□ -1.38
LTN1-203ENST00000389195 ERC2-IT1O76042 136 aa6.46□□□□□ -1.38
LTN1-203ENST00000389195 ELOF1P60002 83 aaKnown RBP6.45□□□□□ -1.38
LTN1-203ENST00000389195 HAMPP81172 84 aa6.45□□□□□ -1.38
LTN1-203ENST00000389195 MRPL55Q7Z7F7 128 aaKnown RBP6.45□□□□□ -1.38
LTN1-203ENST00000389195 LOC107984640A0A0U1RRK4 108 aa6.45□□□□□ -1.38
LTN1-203ENST00000389195 PRLHP81277 87 aa6.45□□□□□ -1.38
LTN1-203ENST00000389195 LINC01600Q96MT4 127 aa6.45□□□□□ -1.38
LTN1-203ENST00000389195 MUC7Q8TAX7 377 aa6.44□□□□□ -1.38
LTN1-203ENST00000389195 Q9BRP9 147 aa6.44□□□□□ -1.38
LTN1-203ENST00000389195 IGLV1-50A0A075B6I6 118 aa6.44□□□□□ -1.38
LTN1-203ENST00000389195 TLX1NBP0CAT3 122 aa6.44□□□□□ -1.38
LTN1-203ENST00000389195 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
LTN1-203ENST00000389195 DNAH8Q96JB1 4490 aa6.44□□□□□ -1.38
LTN1-203ENST00000389195 LINC00846Q9NV44 126 aa6.43□□□□□ -1.38
LTN1-203ENST00000389195 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.43□□□□□ -1.38
LTN1-203ENST00000389195 TMEM256-PLSCR3K7ERE1 68 aa6.42□□□□□ -1.38
LTN1-203ENST00000389195 KCNQ1DNQ9H478 68 aa6.42□□□□□ -1.38
LTN1-203ENST00000389195 PKHD1P08F94 4074 aa6.42□□□□□ -1.38
LTN1-203ENST00000389195 IGKV3D-7A0A0C4DH55 119 aa6.41□□□□□ -1.38
LTN1-203ENST00000389195 C16orf90A8MZG2 172 aa6.41□□□□□ -1.38
LTN1-203ENST00000389195 UBE2BP63146 152 aa6.41□□□□□ -1.38
LTN1-203ENST00000389195 DNAH5Q8TE73 4624 aa6.4□□□□□ -1.38
LTN1-203ENST00000389195 CNBPP62633 177 aaKnown RBP6.4□□□□□ -1.38
LTN1-203ENST00000389195 SDIM1Q6ZPB5 146 aa6.4□□□□□ -1.38
LTN1-203ENST00000389195 A0A087WTM6 91 aa6.4□□□□□ -1.39
LTN1-203ENST00000389195 ETDCA0A1B0GVM5 59 aa6.4□□□□□ -1.39
LTN1-203ENST00000389195 SNCGO76070 127 aa6.4□□□□□ -1.39
LTN1-203ENST00000389195 OBSCN-AS1Q96MR7 158 aa6.4□□□□□ -1.39
LTN1-203ENST00000389195 HIGD2AQ9BW72 106 aa6.4□□□□□ -1.39
LTN1-203ENST00000389195 TNP2Q05952 138 aa6.39□□□□□ -1.39
LTN1-203ENST00000389195 B5MCH6 92 aa6.39□□□□□ -1.39
LTN1-203ENST00000389195 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
LTN1-203ENST00000389195 C9orf163Q8N9P6 203 aa6.39□□□□□ -1.39
LTN1-203ENST00000389195 KMT2CQ8NEZ4 4911 aaKnown RBP6.38□□□□□ -1.39
LTN1-203ENST00000389195 INAFM2P0DMQ5 153 aa6.38□□□□□ -1.39
LTN1-203ENST00000389195 RBM3P98179 157 aaKnown RBP6.38□□□□□ -1.39
LTN1-203ENST00000389195 FAM19A1Q7Z5A9 133 aa6.38□□□□□ -1.39
LTN1-203ENST00000389195 FAT2Q9NYQ8 4349 aa6.38□□□□□ -1.39
LTN1-203ENST00000389195 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.38□□□□□ -1.39
LTN1-203ENST00000389195 Q6ZRX8 168 aa6.38□□□□□ -1.39
LTN1-203ENST00000389195 Q8N377 158 aa6.38□□□□□ -1.39
LTN1-203ENST00000389195 F8WDY8 70 aa6.37□□□□□ -1.39
LTN1-203ENST00000389195 Q6ZR54 194 aa6.37□□□□□ -1.39
LTN1-203ENST00000389195 REG3GQ6UW15 175 aa6.37□□□□□ -1.39
LTN1-203ENST00000389195 SACSQ9NZJ4 4579 aa6.37□□□□□ -1.39
LTN1-203ENST00000389195 NDUFV3P56181 108 aaKnown RBP6.36□□□□□ -1.39
LTN1-203ENST00000389195 A0A087WVE0 104 aa6.36□□□□□ -1.39
LTN1-203ENST00000389195 A0A1B0GX51 115 aa6.35□□□□□ -1.39
LTN1-203ENST00000389195 RTL8CO15255 209 aa6.35□□□□□ -1.39
LTN1-203ENST00000389195 CCKP06307 115 aa6.35□□□□□ -1.39
LTN1-203ENST00000389195 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
LTN1-203ENST00000389195 PKD1P98161 4303 aa6.35□□□□□ -1.39
LTN1-203ENST00000389195 LINC01547P58512 204 aaPredicted RBP6.35□□□□□ -1.39
LTN1-203ENST00000389195 C1orf134Q5TEV5 83 aa6.35□□□□□ -1.39
LTN1-203ENST00000389195 SCXQ7RTU7 201 aa6.35□□□□□ -1.39
LTN1-203ENST00000389195 PLA2G2DQ9UNK4 145 aa6.35□□□□□ -1.39
LTN1-203ENST00000389195 Q6ZQT0 140 aa6.34□□□□□ -1.39
LTN1-203ENST00000389195 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
LTN1-203ENST00000389195 C3orf84H3BNL1 204 aa6.34□□□□□ -1.39
LTN1-203ENST00000389195 LINC00476Q8WZB0 136 aa6.34□□□□□ -1.39
LTN1-203ENST00000389195 DSCR8Q96T75 97 aa6.34□□□□□ -1.39
LTN1-203ENST00000389195 SPRR1AP35321 89 aa6.34□□□□□ -1.4
LTN1-203ENST00000389195 WWC2-AS2Q96NR7 200 aa6.34□□□□□ -1.4
LTN1-203ENST00000389195 IGLV5-37A0A075B6J1 123 aa6.33□□□□□ -1.4
LTN1-203ENST00000389195 FAM240AA0A1B0GVK7 77 aa6.33□□□□□ -1.4
LTN1-203ENST00000389195 C14orf177Q52M58 125 aa6.33□□□□□ -1.4
LTN1-203ENST00000389195 JMJD7-PLA2G4BH0Y9G9 81 aa6.33□□□□□ -1.4
LTN1-203ENST00000389195 FAM30AQ9NZY2 134 aa6.32□□□□□ -1.4
LTN1-203ENST00000389195 PRYO14603 147 aa6.32□□□□□ -1.4
LTN1-203ENST00000389195 ANAPC11Q9NYG5 84 aa6.32□□□□□ -1.4
LTN1-203ENST00000389195 TRBV7-6A0A0J9YX20 115 aa6.31□□□□□ -1.4
LTN1-203ENST00000389195 EPM2AB3EWF7 344 aa6.31□□□□□ -1.4
LTN1-203ENST00000389195 IGLV5-52A0A0A0MRZ9 124 aa6.31□□□□□ -1.4
LTN1-203ENST00000389195 HIST1H4AP62805 103 aaKnown RBP6.3□□□□□ -1.4
LTN1-203ENST00000389195 ALMS1Q8TCU4 4167 aa6.3□□□□□ -1.4
LTN1-203ENST00000389195 Q8N9L7 120 aa6.29□□□□□ -1.4
LTN1-203ENST00000389195 ACYP1P07311 99 aa6.29□□□□□ -1.4
LTN1-203ENST00000389195 SPACA4Q8TDM5 124 aa6.29□□□□□ -1.4
LTN1-203ENST00000389195 FAM236AA0A1B0GUQ0 79 aa6.28□□□□□ -1.4
LTN1-203ENST00000389195 FAM236BA0A1B0GV22 79 aa6.28□□□□□ -1.4
LTN1-203ENST00000389195 LINC00643Q86TS7 51 aa6.28□□□□□ -1.4
LTN1-203ENST00000389195 TRBV7-4A0A0J9YYF1 115 aa6.28□□□□□ -1.4
LTN1-203ENST00000389195 DHRS4-AS1Q9P1J3 65 aa6.28□□□□□ -1.4
LTN1-203ENST00000389195 UBE2AP49459 152 aa6.27□□□□□ -1.41
LTN1-203ENST00000389195 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
LTN1-203ENST00000389195 SMIM29Q86T20 159 aa6.27□□□□□ -1.41
LTN1-203ENST00000389195 KRTAP21-3Q3LHN1 58 aa6.27□□□□□ -1.41
LTN1-203ENST00000389195 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
LTN1-203ENST00000389195 Q6ZVQ6 151 aa6.26□□□□□ -1.41
LTN1-203ENST00000389195 ANAPC13Q9BS18 74 aa6.26□□□□□ -1.41
LTN1-203ENST00000389195 LOC110117498A0A087WWA1 95 aa6.25□□□□□ -1.41
LTN1-203ENST00000389195 A0A1W2PNM2 257 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms