RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 C6orf99Q4VX62 202 aa13.51□□□□□ -0.25
HLA-C-201ENST00000376228 TRBV7-6A0A0J9YX20 115 aa13.5□□□□□ -0.25
HLA-C-201ENST00000376228 ANKRD29Q8N6D5 301 aa13.5□□□□□ -0.25
HLA-C-201ENST00000376228 HSPG2P98160 4391 aa13.49□□□□□ -0.25
HLA-C-201ENST00000376228 A0A096LNI7 61 aa13.48□□□□□ -0.25
HLA-C-201ENST00000376228 ETDBQ3ZM63 59 aa13.48□□□□□ -0.25
HLA-C-201ENST00000376228 KRTAP7-1Q8IUC3 87 aa13.48□□□□□ -0.25
HLA-C-201ENST00000376228 A0A087WYN8 130 aa13.47□□□□□ -0.25
HLA-C-201ENST00000376228 C7orf33Q8WU49 177 aa13.47□□□□□ -0.25
HLA-C-201ENST00000376228 DIRC1Q969H9 104 aa13.47□□□□□ -0.25
HLA-C-201ENST00000376228 ZNF73O43830 326 aaPredicted RBP13.46□□□□□ -0.25
HLA-C-201ENST00000376228 TEN1Q86WV5 123 aa13.46□□□□□ -0.25
HLA-C-201ENST00000376228 KCNQ1DNQ9H478 68 aa13.46□□□□□ -0.25
HLA-C-201ENST00000376228 LINC00167Q96N53 147 aa13.45□□□□□ -0.26
HLA-C-201ENST00000376228 FAM168BA1KXE4 195 aa13.44□□□□□ -0.26
HLA-C-201ENST00000376228 CDK2AP2O75956 126 aa13.44□□□□□ -0.26
HLA-C-201ENST00000376228 OCIAD2Q56VL3 154 aa13.44□□□□□ -0.26
HLA-C-201ENST00000376228 SDIM1Q6ZPB5 146 aa13.44□□□□□ -0.26
HLA-C-201ENST00000376228 LINC00575Q6W349 94 aa13.44□□□□□ -0.26
HLA-C-201ENST00000376228 C22orf24Q9Y442 160 aa13.44□□□□□ -0.26
HLA-C-201ENST00000376228 SNCGO76070 127 aa13.43□□□□□ -0.26
HLA-C-201ENST00000376228 DNAL4O96015 105 aa13.43□□□□□ -0.26
HLA-C-201ENST00000376228 IGLV5-52A0A0A0MRZ9 124 aa13.42□□□□□ -0.26
HLA-C-201ENST00000376228 KRTAP10-1P60331 282 aa13.42□□□□□ -0.26
HLA-C-201ENST00000376228 LINC00474Q9P2X8 69 aa13.42□□□□□ -0.26
HLA-C-201ENST00000376228 IGLV1-50A0A075B6I6 118 aa13.41□□□□□ -0.26
HLA-C-201ENST00000376228 ELOF1P60002 83 aaKnown RBP13.41□□□□□ -0.26
HLA-C-201ENST00000376228 MRPL55Q7Z7F7 128 aaKnown RBP13.41□□□□□ -0.26
HLA-C-201ENST00000376228 KRTAP17-1Q9BYP8 105 aa13.41□□□□□ -0.26
HLA-C-201ENST00000376228 PCLOQ9Y6V0 5065 aa13.41□□□□□ -0.26
HLA-C-201ENST00000376228 K7ERU9 68 aa13.39□□□□□ -0.27
HLA-C-201ENST00000376228 PRYO14603 147 aa13.39□□□□□ -0.27
HLA-C-201ENST00000376228 BAALC-AS2P0C853 105 aa13.39□□□□□ -0.27
HLA-C-201ENST00000376228 COX7BP24311 80 aa13.39□□□□□ -0.27
HLA-C-201ENST00000376228 IGKV2-24A0A0C4DH68 120 aa13.39□□□□□ -0.27
HLA-C-201ENST00000376228 FAM19A5Q7Z5A7 132 aaPredicted RBP13.39□□□□□ -0.27
HLA-C-201ENST00000376228 PPDPFLQ8WWR9 84 aa13.38□□□□□ -0.27
HLA-C-201ENST00000376228 A0A1W2PNN7 141 aa13.37□□□□□ -0.27
HLA-C-201ENST00000376228 hADV29S1A0JD25 119 aa13.37□□□□□ -0.27
HLA-C-201ENST00000376228 SPRR1AP35321 89 aa13.37□□□□□ -0.27
HLA-C-201ENST00000376228 ABCA13Q86UQ4 5058 aa13.35□□□□□ -0.27
HLA-C-201ENST00000376228 LINC00528Q8N1L1 170 aa13.35□□□□□ -0.27
HLA-C-201ENST00000376228 ORMDL1Q9P0S3 153 aa13.35□□□□□ -0.27
HLA-C-201ENST00000376228 KRTAP4-5Q9BYR2 181 aa13.34□□□□□ -0.27
HLA-C-201ENST00000376228 EPM2AB3EWF7 344 aa13.34□□□□□ -0.27
HLA-C-201ENST00000376228 KRTAP4-16G5E9R7 235 aaPredicted RBP13.34□□□□□ -0.27
HLA-C-201ENST00000376228 J3QR89 54 aa13.34□□□□□ -0.27
HLA-C-201ENST00000376228 CHTF8P0CG12 524 aa13.33□□□□□ -0.28
HLA-C-201ENST00000376228 H3BQ85 93 aa13.32□□□□□ -0.28
HLA-C-201ENST00000376228 INAFM2P0DMQ5 153 aa13.32□□□□□ -0.28
HLA-C-201ENST00000376228 HAMPP81172 84 aa13.32□□□□□ -0.28
HLA-C-201ENST00000376228 RPL37AP8A6NKH3 93 aa13.31□□□□□ -0.28
HLA-C-201ENST00000376228 XGP55808 180 aa13.31□□□□□ -0.28
HLA-C-201ENST00000376228 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.29□□□□□ -0.28
HLA-C-201ENST00000376228 SPACA4Q8TDM5 124 aa13.29□□□□□ -0.28
HLA-C-201ENST00000376228 TMEM256-PLSCR3K7ERE1 68 aa13.29□□□□□ -0.28
HLA-C-201ENST00000376228 TEX49A0A1B0GTD5 131 aa13.28□□□□□ -0.28
HLA-C-201ENST00000376228 B5MCH6 92 aa13.27□□□□□ -0.29
HLA-C-201ENST00000376228 GHRHP01286 108 aa13.27□□□□□ -0.29
HLA-C-201ENST00000376228 Q8N1X5 172 aa13.27□□□□□ -0.29
HLA-C-201ENST00000376228 FAM30AQ9NZY2 134 aa13.27□□□□□ -0.29
HLA-C-201ENST00000376228 DNAH8Q96JB1 4490 aa13.27□□□□□ -0.29
HLA-C-201ENST00000376228 REG3GQ6UW15 175 aa13.26□□□□□ -0.29
HLA-C-201ENST00000376228 Q6ZRX8 168 aa13.26□□□□□ -0.29
HLA-C-201ENST00000376228 ETDCA0A1B0GVM5 59 aa13.25□□□□□ -0.29
HLA-C-201ENST00000376228 PANO1I0J062 215 aa13.25□□□□□ -0.29
HLA-C-201ENST00000376228 OBSCN-AS1Q96MR7 158 aa13.24□□□□□ -0.29
HLA-C-201ENST00000376228 DHRS4-AS1Q9P1J3 65 aa13.24□□□□□ -0.29
HLA-C-201ENST00000376228 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.24□□□□□ -0.29
HLA-C-201ENST00000376228 Q6ZQY7 126 aa13.23□□□□□ -0.29
HLA-C-201ENST00000376228 FAT1Q14517 4588 aa13.23□□□□□ -0.29
HLA-C-201ENST00000376228 PHF5AQ7RTV0 110 aaKnown RBP13.22□□□□□ -0.29
HLA-C-201ENST00000376228 SMR3BP02814 79 aaPredicted RBP13.21□□□□□ -0.29
HLA-C-201ENST00000376228 PLAC8Q9NZF1 115 aa13.18□□□□□ -0.3
HLA-C-201ENST00000376228 JMJD7-PLA2G4BH0Y9G9 81 aa13.18□□□□□ -0.3
HLA-C-201ENST00000376228 DPH3Q96FX2 82 aa13.18□□□□□ -0.3
HLA-C-201ENST00000376228 Q9BRP9 147 aa13.18□□□□□ -0.3
HLA-C-201ENST00000376228 UBE2BP63146 152 aa13.17□□□□□ -0.3
HLA-C-201ENST00000376228 Q6ZSA8 131 aa13.17□□□□□ -0.3
HLA-C-201ENST00000376228 H0Y9J4 135 aa13.15□□□□□ -0.3
HLA-C-201ENST00000376228 Q5VSD8 79 aa13.14□□□□□ -0.31
HLA-C-201ENST00000376228 KRTAP11-1Q8IUC1 163 aa13.14□□□□□ -0.31
HLA-C-201ENST00000376228 FAM240AA0A1B0GVK7 77 aa13.12□□□□□ -0.31
HLA-C-201ENST00000376228 SCXQ7RTU7 201 aa13.11□□□□□ -0.31
HLA-C-201ENST00000376228 FAM19A1Q7Z5A9 133 aa13.11□□□□□ -0.31
HLA-C-201ENST00000376228 SMCR5Q8TEV8 140 aa13.1□□□□□ -0.31
HLA-C-201ENST00000376228 IGLV5-48A0A075B6I7 105 aa13.09□□□□□ -0.31
HLA-C-201ENST00000376228 LINC01547P58512 204 aaPredicted RBP13.08□□□□□ -0.31
HLA-C-201ENST00000376228 ACYP1P07311 99 aa13.08□□□□□ -0.32
HLA-C-201ENST00000376228 VPS25Q9BRG1 176 aa13.08□□□□□ -0.32
HLA-C-201ENST00000376228 BCE1O60756 84 aa13.07□□□□□ -0.32
HLA-C-201ENST00000376228 C14orf132Q9NPU4 83 aa13.07□□□□□ -0.32
HLA-C-201ENST00000376228 LAMTOR3Q9UHA4 124 aa13.07□□□□□ -0.32
HLA-C-201ENST00000376228 FAM229AH3BQW9 127 aa13.06□□□□□ -0.32
HLA-C-201ENST00000376228 NDUFV3P56181 108 aaKnown RBP13.06□□□□□ -0.32
HLA-C-201ENST00000376228 Q8N377 158 aa13.06□□□□□ -0.32
HLA-C-201ENST00000376228 CIRBP-AS1Q8TBR5 109 aa13.06□□□□□ -0.32
HLA-C-201ENST00000376228 ERC2-IT1O76042 136 aa13.05□□□□□ -0.32
HLA-C-201ENST00000376228 RBM3P98179 157 aaKnown RBP13.05□□□□□ -0.32
HLA-C-201ENST00000376228 VPS13BQ7Z7G8 4022 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms