RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 INAFM2P0DMQ5 153 aa8.07□□□□□ -1.12
PRPF4-202ENST00000374199 DIRC1Q969H9 104 aa8.07□□□□□ -1.12
PRPF4-202ENST00000374199 LOC107984640A0A0U1RRK4 108 aa8.06□□□□□ -1.12
PRPF4-202ENST00000374199 DNAL4O96015 105 aa8.06□□□□□ -1.12
PRPF4-202ENST00000374199 TMEM256-PLSCR3K7ERE1 68 aa8.06□□□□□ -1.12
PRPF4-202ENST00000374199 hADV29S1A0JD25 119 aa8.05□□□□□ -1.12
PRPF4-202ENST00000374199 IGLV1-50A0A075B6I6 118 aa8.05□□□□□ -1.12
PRPF4-202ENST00000374199 C7orf33Q8WU49 177 aa8.05□□□□□ -1.12
PRPF4-202ENST00000374199 Q6ZR54 194 aa8.04□□□□□ -1.12
PRPF4-202ENST00000374199 C16orf90A8MZG2 172 aa8.03□□□□□ -1.12
PRPF4-202ENST00000374199 C14orf177Q52M58 125 aa8.03□□□□□ -1.12
PRPF4-202ENST00000374199 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.03□□□□□ -1.12
PRPF4-202ENST00000374199 PRYO14603 147 aa8.03□□□□□ -1.12
PRPF4-202ENST00000374199 COX7BP24311 80 aa8.02□□□□□ -1.13
PRPF4-202ENST00000374199 FBN3Q75N90 2809 aa8.02□□□□□ -1.13
PRPF4-202ENST00000374199 LOC110117498A0A087WWA1 95 aa8.01□□□□□ -1.13
PRPF4-202ENST00000374199 JMJD7-PLA2G4BH0Y9G9 81 aa8.01□□□□□ -1.13
PRPF4-202ENST00000374199 UBE2DNLQ8IWF7 75 aa8.01□□□□□ -1.13
PRPF4-202ENST00000374199 FAM168BA1KXE4 195 aa8.01□□□□□ -1.13
PRPF4-202ENST00000374199 Q6Q795 121 aa8.01□□□□□ -1.13
PRPF4-202ENST00000374199 DNAH11Q96DT5 4516 aa8□□□□□ -1.13
PRPF4-202ENST00000374199 SMCR5Q8TEV8 140 aa8□□□□□ -1.13
PRPF4-202ENST00000374199 DNAH8Q96JB1 4490 aa7.99□□□□□ -1.13
PRPF4-202ENST00000374199 C9orf163Q8N9P6 203 aa7.99□□□□□ -1.13
PRPF4-202ENST00000374199 TRBV7-7A0A0K0K1E9 115 aa7.98□□□□□ -1.13
PRPF4-202ENST00000374199 LINC01547P58512 204 aaPredicted RBP7.98□□□□□ -1.13
PRPF4-202ENST00000374199 SMIM20Q8N5G0 67 aa7.98□□□□□ -1.13
PRPF4-202ENST00000374199 CCKP06307 115 aa7.98□□□□□ -1.13
PRPF4-202ENST00000374199 A0A096LNI7 61 aa7.97□□□□□ -1.13
PRPF4-202ENST00000374199 Q6ZRX8 168 aa7.97□□□□□ -1.13
PRPF4-202ENST00000374199 MRPL55Q7Z7F7 128 aaKnown RBP7.97□□□□□ -1.13
PRPF4-202ENST00000374199 TENM2Q9NT68 2774 aa7.97□□□□□ -1.13
PRPF4-202ENST00000374199 FAT2Q9NYQ8 4349 aa7.97□□□□□ -1.13
PRPF4-202ENST00000374199 NKAPP1Q8N9T2 125 aa7.97□□□□□ -1.13
PRPF4-202ENST00000374199 PKD1P98161 4303 aa7.97□□□□□ -1.13
PRPF4-202ENST00000374199 Q6ZQY7 126 aa7.96□□□□□ -1.13
PRPF4-202ENST00000374199 PKIGQ9Y2B9 76 aa7.96□□□□□ -1.14
PRPF4-202ENST00000374199 Q6ZQT0 140 aa7.95□□□□□ -1.14
PRPF4-202ENST00000374199 Q9BRP9 147 aa7.95□□□□□ -1.14
PRPF4-202ENST00000374199 C14orf132Q9NPU4 83 aa7.95□□□□□ -1.14
PRPF4-202ENST00000374199 IGLV5-48A0A075B6I7 105 aa7.95□□□□□ -1.14
PRPF4-202ENST00000374199 TRBV7-4A0A0J9YYF1 115 aa7.95□□□□□ -1.14
PRPF4-202ENST00000374199 GHRHP01286 108 aa7.94□□□□□ -1.14
PRPF4-202ENST00000374199 IMUPQ9GZP8 106 aa7.93□□□□□ -1.14
PRPF4-202ENST00000374199 DHRS4-AS1Q9P1J3 65 aa7.93□□□□□ -1.14
PRPF4-202ENST00000374199 A0A1W2PNN7 141 aa7.93□□□□□ -1.14
PRPF4-202ENST00000374199 LINC00643Q86TS7 51 aa7.93□□□□□ -1.14
PRPF4-202ENST00000374199 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
PRPF4-202ENST00000374199 PSCAO43653 123 aa7.92□□□□□ -1.14
PRPF4-202ENST00000374199 H0Y9J4 135 aa7.91□□□□□ -1.14
PRPF4-202ENST00000374199 TNP2Q05952 138 aa7.91□□□□□ -1.14
PRPF4-202ENST00000374199 PDE6GP18545 87 aa7.91□□□□□ -1.14
PRPF4-202ENST00000374199 FAM236AA0A1B0GUQ0 79 aa7.9□□□□□ -1.14
PRPF4-202ENST00000374199 FAM236BA0A1B0GV22 79 aa7.9□□□□□ -1.14
PRPF4-202ENST00000374199 A0A087WTM6 91 aa7.9□□□□□ -1.14
PRPF4-202ENST00000374199 LINC00846Q9NV44 126 aa7.9□□□□□ -1.14
PRPF4-202ENST00000374199 LINC00474Q9P2X8 69 aa7.9□□□□□ -1.15
PRPF4-202ENST00000374199 RBM3P98179 157 aaKnown RBP7.89□□□□□ -1.15
PRPF4-202ENST00000374199 Q8N377 158 aa7.89□□□□□ -1.15
PRPF4-202ENST00000374199 SPACA4Q8TDM5 124 aa7.89□□□□□ -1.15
PRPF4-202ENST00000374199 HYDINQ4G0P3 5121 aa7.89□□□□□ -1.15
PRPF4-202ENST00000374199 GAGE2AQ6NT46 116 aa7.89□□□□□ -1.15
PRPF4-202ENST00000374199 REG3GQ6UW15 175 aa7.89□□□□□ -1.15
PRPF4-202ENST00000374199 FAM19A5Q7Z5A7 132 aaPredicted RBP7.89□□□□□ -1.15
PRPF4-202ENST00000374199 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
PRPF4-202ENST00000374199 Q6JHZ5 121 aa7.88□□□□□ -1.15
PRPF4-202ENST00000374199 KRTAP13-1Q8IUC0 172 aa7.87□□□□□ -1.15
PRPF4-202ENST00000374199 KRTAP11-1Q8IUC1 163 aa7.87□□□□□ -1.15
PRPF4-202ENST00000374199 PANO1I0J062 215 aa7.86□□□□□ -1.15
PRPF4-202ENST00000374199 HIST1H4AP62805 103 aaKnown RBP7.86□□□□□ -1.15
PRPF4-202ENST00000374199 SMIM29Q86T20 159 aa7.84□□□□□ -1.16
PRPF4-202ENST00000374199 LINC00476Q8WZB0 136 aa7.84□□□□□ -1.16
PRPF4-202ENST00000374199 WWC2-AS2Q96NR7 200 aa7.84□□□□□ -1.16
PRPF4-202ENST00000374199 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.83□□□□□ -1.16
PRPF4-202ENST00000374199 A0A1B0GW54 56 aa7.83□□□□□ -1.16
PRPF4-202ENST00000374199 ERC2-IT1O76042 136 aa7.83□□□□□ -1.16
PRPF4-202ENST00000374199 ATP5EP2Q5VTU8 51 aa7.83□□□□□ -1.16
PRPF4-202ENST00000374199 IGLV8-61A0A075B6I0 122 aa7.83□□□□□ -1.16
PRPF4-202ENST00000374199 ETDCA0A1B0GVM5 59 aa7.83□□□□□ -1.16
PRPF4-202ENST00000374199 M0R2N4 97 aa7.83□□□□□ -1.16
PRPF4-202ENST00000374199 SPRR1BP22528 89 aa7.83□□□□□ -1.16
PRPF4-202ENST00000374199 CHTF8P0CG12 524 aa7.82□□□□□ -1.16
PRPF4-202ENST00000374199 C9orf153Q5TBE3 101 aa7.82□□□□□ -1.16
PRPF4-202ENST00000374199 DSCR8Q96T75 97 aa7.82□□□□□ -1.16
PRPF4-202ENST00000374199 LAMTOR3Q9UHA4 124 aa7.81□□□□□ -1.16
PRPF4-202ENST00000374199 SACSQ9NZJ4 4579 aa7.81□□□□□ -1.16
PRPF4-202ENST00000374199 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.81□□□□□ -1.16
PRPF4-202ENST00000374199 PLAC8Q9NZF1 115 aa7.8□□□□□ -1.16
PRPF4-202ENST00000374199 IGKV2-24A0A0C4DH68 120 aa7.8□□□□□ -1.16
PRPF4-202ENST00000374199 PHF5AQ7RTV0 110 aaKnown RBP7.79□□□□□ -1.16
PRPF4-202ENST00000374199 C3orf22Q8N5N4 141 aa7.79□□□□□ -1.16
PRPF4-202ENST00000374199 C3orf84H3BNL1 204 aa7.78□□□□□ -1.16
PRPF4-202ENST00000374199 RTL8CO15255 209 aa7.78□□□□□ -1.16
PRPF4-202ENST00000374199 ST20-AS1Q8NBB2 130 aa7.78□□□□□ -1.16
PRPF4-202ENST00000374199 C1orf134Q5TEV5 83 aa7.78□□□□□ -1.16
PRPF4-202ENST00000374199 SPRR4Q96PI1 79 aa7.77□□□□□ -1.17
PRPF4-202ENST00000374199 BCE1O60756 84 aa7.76□□□□□ -1.17
PRPF4-202ENST00000374199 IGKV3D-7A0A0C4DH55 119 aa7.76□□□□□ -1.17
PRPF4-202ENST00000374199 UQCRQO14949 82 aa7.76□□□□□ -1.17
PRPF4-202ENST00000374199 CXCL6P80162 114 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms