RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 C6orf48Q9UBA6 75 aa5.39□□□□□ -1.55
CD44-205ENST00000352818 NBDYA0A0U1RRE5 68 aa5.38□□□□□ -1.55
CD44-205ENST00000352818 ZNF561-AS1K7EIQ3 104 aa5.38□□□□□ -1.55
CD44-205ENST00000352818 C9orf116Q5BN46 136 aaPredicted RBP5.38□□□□□ -1.55
CD44-205ENST00000352818 RMI2Q96E14 147 aa5.38□□□□□ -1.55
CD44-205ENST00000352818 A0A1B0GX51 115 aa5.37□□□□□ -1.55
CD44-205ENST00000352818 CAMK2N2Q96S95 79 aa5.37□□□□□ -1.55
CD44-205ENST00000352818 TMEM126AQ9H061 195 aa5.37□□□□□ -1.55
CD44-205ENST00000352818 IGKV2D-24A0A075B6R9 120 aa5.36□□□□□ -1.55
CD44-205ENST00000352818 OR13C6PQ8NH95 151 aa5.36□□□□□ -1.55
CD44-205ENST00000352818 FAM218AQ96MZ4 157 aa5.36□□□□□ -1.55
CD44-205ENST00000352818 KRTAP1-5Q9BYS1 174 aa5.36□□□□□ -1.55
CD44-205ENST00000352818 HIGD2BQ4VC39 106 aa5.35□□□□□ -1.55
CD44-205ENST00000352818 Q6ZRU5 148 aa5.35□□□□□ -1.55
CD44-205ENST00000352818 LINC00526Q96FQ7 95 aa5.35□□□□□ -1.55
CD44-205ENST00000352818 NDUFC2-KCTD14E9PQ53 114 aa5.34□□□□□ -1.55
CD44-205ENST00000352818 IGLV6-57P01721 117 aa5.34□□□□□ -1.55
CD44-205ENST00000352818 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
CD44-205ENST00000352818 Q8NDZ9 215 aa5.34□□□□□ -1.55
CD44-205ENST00000352818 LINC00167Q96N53 147 aa5.34□□□□□ -1.55
CD44-205ENST00000352818 FAM240AA0A1B0GVK7 77 aa5.33□□□□□ -1.56
CD44-205ENST00000352818 NCR3O14931 201 aa5.33□□□□□ -1.56
CD44-205ENST00000352818 OXTP01178 125 aa5.33□□□□□ -1.56
CD44-205ENST00000352818 SYCNQ0VAF6 134 aa5.33□□□□□ -1.56
CD44-205ENST00000352818 FSIP2Q5CZC0 6907 aa5.33□□□□□ -1.56
CD44-205ENST00000352818 A0A087WYN8 130 aa5.32□□□□□ -1.56
CD44-205ENST00000352818 TEX49A0A1B0GTD5 131 aa5.32□□□□□ -1.56
CD44-205ENST00000352818 DNAL4O96015 105 aa5.32□□□□□ -1.56
CD44-205ENST00000352818 BAALC-AS2P0C853 105 aa5.32□□□□□ -1.56
CD44-205ENST00000352818 VPREB1P12018 145 aa5.32□□□□□ -1.56
CD44-205ENST00000352818 S100A7L2Q5SY68 101 aa5.32□□□□□ -1.56
CD44-205ENST00000352818 CDIP1Q9H305 208 aa5.32□□□□□ -1.56
CD44-205ENST00000352818 Q9HAA7 133 aa5.32□□□□□ -1.56
CD44-205ENST00000352818 LPAP08519 4548 aa5.31□□□□□ -1.56
CD44-205ENST00000352818 TRBV7-6A0A0J9YX20 115 aa5.31□□□□□ -1.56
CD44-205ENST00000352818 KRTAP10-4P60372 401 aaPredicted RBP5.31□□□□□ -1.56
CD44-205ENST00000352818 PRR3P79522 188 aaKnown RBP5.31□□□□□ -1.56
CD44-205ENST00000352818 C22orf24Q9Y442 160 aa5.31□□□□□ -1.56
CD44-205ENST00000352818 USP17L23D6RBM5 183 aa5.3□□□□□ -1.56
CD44-205ENST00000352818 M0R378 163 aa5.3□□□□□ -1.56
CD44-205ENST00000352818 LECT2O14960 151 aa5.3□□□□□ -1.56
CD44-205ENST00000352818 SNCGO76070 127 aa5.3□□□□□ -1.56
CD44-205ENST00000352818 MT1HL1P0DM35 61 aa5.3□□□□□ -1.56
CD44-205ENST00000352818 RPL18AQ02543 176 aaKnown RBP5.3□□□□□ -1.56
CD44-205ENST00000352818 OBSCN-AS1Q96MR7 158 aa5.3□□□□□ -1.56
CD44-205ENST00000352818 SIGMAR1Q99720 223 aa5.3□□□□□ -1.56
CD44-205ENST00000352818 ORMDL1Q9P0S3 153 aa5.3□□□□□ -1.56
CD44-205ENST00000352818 H3BQ85 93 aa5.29□□□□□ -1.56
CD44-205ENST00000352818 SCGB1A1P11684 91 aa5.29□□□□□ -1.56
CD44-205ENST00000352818 C6orf99Q4VX62 202 aa5.29□□□□□ -1.56
CD44-205ENST00000352818 LCE2AQ5TA79 106 aaPredicted RBP5.29□□□□□ -1.56
CD44-205ENST00000352818 LINC00575Q6W349 94 aa5.29□□□□□ -1.56
CD44-205ENST00000352818 Q6ZRN7 208 aaPredicted RBP5.29□□□□□ -1.56
CD44-205ENST00000352818 Q6ZRP5 223 aa5.29□□□□□ -1.56
CD44-205ENST00000352818 Q8N814 137 aa5.29□□□□□ -1.56
CD44-205ENST00000352818 XAGE1AQ9HD64 81 aa5.29□□□□□ -1.56
CD44-205ENST00000352818 CRCT1Q9UGL9 99 aa5.29□□□□□ -1.56
CD44-205ENST00000352818 IGLV5-37A0A075B6J1 123 aa5.28□□□□□ -1.56
CD44-205ENST00000352818 TRAV23DV6A0A075B6W5 121 aa5.28□□□□□ -1.56
CD44-205ENST00000352818 TRBV10-3A0A0K0K1G6 114 aa5.28□□□□□ -1.56
CD44-205ENST00000352818 ACYP1P07311 99 aa5.28□□□□□ -1.56
CD44-205ENST00000352818 DIRC1Q969H9 104 aa5.28□□□□□ -1.56
CD44-205ENST00000352818 C9orf129Q5T035 196 aaKnown RBP5.27□□□□□ -1.57
CD44-205ENST00000352818 LCE2BO14633 110 aa5.26□□□□□ -1.57
CD44-205ENST00000352818 ZNF73O43830 326 aaPredicted RBP5.26□□□□□ -1.57
CD44-205ENST00000352818 SLPIP03973 132 aa5.26□□□□□ -1.57
CD44-205ENST00000352818 ELOF1P60002 83 aaKnown RBP5.26□□□□□ -1.57
CD44-205ENST00000352818 TTC32Q5I0X7 151 aa5.26□□□□□ -1.57
CD44-205ENST00000352818 FAM30AQ9NZY2 134 aa5.26□□□□□ -1.57
CD44-205ENST00000352818 LOC107984640A0A0U1RRK4 108 aa5.25□□□□□ -1.57
CD44-205ENST00000352818 hADV29S1A0JD25 119 aa5.25□□□□□ -1.57
CD44-205ENST00000352818 JMJD7-PLA2G4BH0Y9G9 81 aa5.25□□□□□ -1.57
CD44-205ENST00000352818 TMEM256-PLSCR3K7ERE1 68 aa5.25□□□□□ -1.57
CD44-205ENST00000352818 PLA2G1BP04054 148 aaKnown RBP5.25□□□□□ -1.57
CD44-205ENST00000352818 CNBPP62633 177 aaKnown RBP5.25□□□□□ -1.57
CD44-205ENST00000352818 GAGE2EQ4V326 116 aa5.25□□□□□ -1.57
CD44-205ENST00000352818 C14orf177Q52M58 125 aa5.25□□□□□ -1.57
CD44-205ENST00000352818 GAGE2DQ9UEU5 116 aa5.25□□□□□ -1.57
CD44-205ENST00000352818 GHRHP01286 108 aa5.24□□□□□ -1.57
CD44-205ENST00000352818 COX7BP24311 80 aa5.24□□□□□ -1.57
CD44-205ENST00000352818 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.24□□□□□ -1.57
CD44-205ENST00000352818 SDIM1Q6ZPB5 146 aa5.24□□□□□ -1.57
CD44-205ENST00000352818 LINC00528Q8N1L1 170 aa5.24□□□□□ -1.57
CD44-205ENST00000352818 NKAPP1Q8N9T2 125 aa5.24□□□□□ -1.57
CD44-205ENST00000352818 KCNQ1DNQ9H478 68 aa5.24□□□□□ -1.57
CD44-205ENST00000352818 PRYO14603 147 aa5.23□□□□□ -1.57
CD44-205ENST00000352818 PKIGQ9Y2B9 76 aa5.23□□□□□ -1.57
CD44-205ENST00000352818 MT-ATP8P03928 68 aa5.22□□□□□ -1.57
CD44-205ENST00000352818 C7orf33Q8WU49 177 aa5.22□□□□□ -1.57
CD44-205ENST00000352818 PSCAO43653 123 aa5.21□□□□□ -1.58
CD44-205ENST00000352818 Q6Q795 121 aa5.21□□□□□ -1.58
CD44-205ENST00000352818 SPRR1AP35321 89 aa5.2□□□□□ -1.58
CD44-205ENST00000352818 Q6ZQY7 126 aa5.2□□□□□ -1.58
CD44-205ENST00000352818 C14orf132Q9NPU4 83 aa5.2□□□□□ -1.58
CD44-205ENST00000352818 IGLV1-50A0A075B6I6 118 aa5.19□□□□□ -1.58
CD44-205ENST00000352818 A0A087WTM6 91 aa5.19□□□□□ -1.58
CD44-205ENST00000352818 TRBV7-7A0A0K0K1E9 115 aa5.19□□□□□ -1.58
CD44-205ENST00000352818 KRTAP4-16G5E9R7 235 aaPredicted RBP5.19□□□□□ -1.58
CD44-205ENST00000352818 CCKP06307 115 aa5.19□□□□□ -1.58
CD44-205ENST00000352818 GAGE2BQ13066 116 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms