RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 Q6ZQY7 126 aa10.82□□□□□ -0.68
DDX41-201ENST00000330503 Q6ZR54 194 aa10.82□□□□□ -0.68
DDX41-201ENST00000330503 FAM240AA0A1B0GVK7 77 aa10.81□□□□□ -0.68
DDX41-201ENST00000330503 XGP55808 180 aa10.81□□□□□ -0.68
DDX41-201ENST00000330503 C14orf132Q9NPU4 83 aa10.81□□□□□ -0.68
DDX41-201ENST00000330503 IGKV2-24A0A0C4DH68 120 aa10.8□□□□□ -0.68
DDX41-201ENST00000330503 A0A1W2PNN7 141 aa10.8□□□□□ -0.68
DDX41-201ENST00000330503 MRPL55Q7Z7F7 128 aaKnown RBP10.8□□□□□ -0.68
DDX41-201ENST00000330503 C9orf163Q8N9P6 203 aa10.8□□□□□ -0.68
DDX41-201ENST00000330503 KMT2AQ03164 3969 aa10.8□□□□□ -0.68
DDX41-201ENST00000330503 KRTAP4-16G5E9R7 235 aaPredicted RBP10.79□□□□□ -0.68
DDX41-201ENST00000330503 MT-ATP8P03928 68 aa10.79□□□□□ -0.68
DDX41-201ENST00000330503 A0A1B0GV72 72 aa10.78□□□□□ -0.68
DDX41-201ENST00000330503 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.78□□□□□ -0.68
DDX41-201ENST00000330503 PRYO14603 147 aa10.78□□□□□ -0.68
DDX41-201ENST00000330503 SPRR1AP35321 89 aa10.78□□□□□ -0.68
DDX41-201ENST00000330503 DNAH2Q9P225 4427 aa10.77□□□□□ -0.68
DDX41-201ENST00000330503 TGP01266 2768 aa10.76□□□□□ -0.69
DDX41-201ENST00000330503 ACYP1P07311 99 aa10.76□□□□□ -0.69
DDX41-201ENST00000330503 SDIM1Q6ZPB5 146 aa10.76□□□□□ -0.69
DDX41-201ENST00000330503 JMJD7-PLA2G4BH0Y9G9 81 aa10.75□□□□□ -0.69
DDX41-201ENST00000330503 CHTF8P0CG12 524 aa10.75□□□□□ -0.69
DDX41-201ENST00000330503 GAGE2AQ6NT46 116 aa10.75□□□□□ -0.69
DDX41-201ENST00000330503 A0A087WTM6 91 aa10.75□□□□□ -0.69
DDX41-201ENST00000330503 B5MCH6 92 aa10.75□□□□□ -0.69
DDX41-201ENST00000330503 H3BQ85 93 aa10.73□□□□□ -0.69
DDX41-201ENST00000330503 WWC2-AS2Q96NR7 200 aa10.73□□□□□ -0.69
DDX41-201ENST00000330503 Q6ZRX8 168 aa10.72□□□□□ -0.69
DDX41-201ENST00000330503 DNAH6Q9C0G6 4158 aa10.72□□□□□ -0.69
DDX41-201ENST00000330503 Q9BRP9 147 aa10.72□□□□□ -0.69
DDX41-201ENST00000330503 LY6G6CO95867 125 aa10.71□□□□□ -0.69
DDX41-201ENST00000330503 ETDCA0A1B0GVM5 59 aa10.7□□□□□ -0.7
DDX41-201ENST00000330503 CCKP06307 115 aa10.7□□□□□ -0.7
DDX41-201ENST00000330503 SMCR5Q8TEV8 140 aa10.7□□□□□ -0.7
DDX41-201ENST00000330503 LAMTOR3Q9UHA4 124 aa10.7□□□□□ -0.7
DDX41-201ENST00000330503 HECTD4Q9Y4D8 3996 aa10.7□□□□□ -0.7
DDX41-201ENST00000330503 PANO1I0J062 215 aa10.7□□□□□ -0.7
DDX41-201ENST00000330503 REG3GQ6UW15 175 aa10.69□□□□□ -0.7
DDX41-201ENST00000330503 DNAH17Q9UFH2 4485 aa10.69□□□□□ -0.7
DDX41-201ENST00000330503 RBM3P98179 157 aaKnown RBP10.69□□□□□ -0.7
DDX41-201ENST00000330503 DHRS4-AS1Q9P1J3 65 aa10.69□□□□□ -0.7
DDX41-201ENST00000330503 C1orf134Q5TEV5 83 aa10.67□□□□□ -0.7
DDX41-201ENST00000330503 GHRHP01286 108 aa10.67□□□□□ -0.7
DDX41-201ENST00000330503 FUSP35637 526 aaKnown RBP eCLIP10.67□□□□□ -0.7
DDX41-201ENST00000330503 PHF5AQ7RTV0 110 aaKnown RBP10.67□□□□□ -0.7
DDX41-201ENST00000330503 KRTAP11-1Q8IUC1 163 aa10.67□□□□□ -0.7
DDX41-201ENST00000330503 LINC00476Q8WZB0 136 aa10.67□□□□□ -0.7
DDX41-201ENST00000330503 PKIGQ9Y2B9 76 aa10.67□□□□□ -0.7
DDX41-201ENST00000330503 ALMS1Q8TCU4 4167 aa10.66□□□□□ -0.7
DDX41-201ENST00000330503 LINC01547P58512 204 aaPredicted RBP10.66□□□□□ -0.7
DDX41-201ENST00000330503 LOC110117498A0A087WWA1 95 aa10.65□□□□□ -0.7
DDX41-201ENST00000330503 SCGB1A1P11684 91 aa10.65□□□□□ -0.7
DDX41-201ENST00000330503 NDUFV3P56181 108 aaKnown RBP10.65□□□□□ -0.7
DDX41-201ENST00000330503 Q6ZQT0 140 aa10.65□□□□□ -0.7
DDX41-201ENST00000330503 LINC00474Q9P2X8 69 aa10.65□□□□□ -0.7
DDX41-201ENST00000330503 ERC2-IT1O76042 136 aa10.64□□□□□ -0.71
DDX41-201ENST00000330503 Q8N377 158 aa10.64□□□□□ -0.71
DDX41-201ENST00000330503 LINC00846Q9NV44 126 aa10.64□□□□□ -0.71
DDX41-201ENST00000330503 DEFB105AQ8NG35 78 aa10.63□□□□□ -0.71
DDX41-201ENST00000330503 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.63□□□□□ -0.71
DDX41-201ENST00000330503 RTL8CO15255 209 aa10.62□□□□□ -0.71
DDX41-201ENST00000330503 LINC00643Q86TS7 51 aa10.62□□□□□ -0.71
DDX41-201ENST00000330503 ST20-AS1Q8NBB2 130 aa10.62□□□□□ -0.71
DDX41-201ENST00000330503 SPACA4Q8TDM5 124 aa10.61□□□□□ -0.71
DDX41-201ENST00000330503 UBE2BP63146 152 aa10.61□□□□□ -0.71
DDX41-201ENST00000330503 DSCR8Q96T75 97 aa10.61□□□□□ -0.71
DDX41-201ENST00000330503 TRBV7-4A0A0J9YYF1 115 aa10.6□□□□□ -0.71
DDX41-201ENST00000330503 EPM2AB3EWF7 344 aa10.6□□□□□ -0.71
DDX41-201ENST00000330503 C3orf84H3BNL1 204 aa10.59□□□□□ -0.71
DDX41-201ENST00000330503 FAM19A1Q7Z5A9 133 aa10.59□□□□□ -0.71
DDX41-201ENST00000330503 DPH3Q96FX2 82 aa10.59□□□□□ -0.71
DDX41-201ENST00000330503 IGLV5-48A0A075B6I7 105 aa10.58□□□□□ -0.72
DDX41-201ENST00000330503 PDE6GP18545 87 aa10.57□□□□□ -0.72
DDX41-201ENST00000330503 PRLHP81277 87 aa10.57□□□□□ -0.72
DDX41-201ENST00000330503 TNP2Q05952 138 aa10.57□□□□□ -0.72
DDX41-201ENST00000330503 TRBV7-7A0A0K0K1E9 115 aa10.56□□□□□ -0.72
DDX41-201ENST00000330503 Q6Q795 121 aa10.56□□□□□ -0.72
DDX41-201ENST00000330503 FRAS1Q86XX4 4008 aa10.56□□□□□ -0.72
DDX41-201ENST00000330503 C3orf22Q8N5N4 141 aa10.55□□□□□ -0.72
DDX41-201ENST00000330503 IGLV5-52A0A0A0MRZ9 124 aa10.54□□□□□ -0.72
DDX41-201ENST00000330503 DNAH11Q96DT5 4516 aa10.53□□□□□ -0.72
DDX41-201ENST00000330503 H0Y9J4 135 aa10.51□□□□□ -0.73
DDX41-201ENST00000330503 SMIM29Q86T20 159 aa10.51□□□□□ -0.73
DDX41-201ENST00000330503 Q6JHZ5 121 aa10.51□□□□□ -0.73
DDX41-201ENST00000330503 HIGD2AQ9BW72 106 aa10.51□□□□□ -0.73
DDX41-201ENST00000330503 HYDINQ4G0P3 5121 aa10.5□□□□□ -0.73
DDX41-201ENST00000330503 IMUPQ9GZP8 106 aa10.5□□□□□ -0.73
DDX41-201ENST00000330503 PLAC8Q9NZF1 115 aa10.49□□□□□ -0.73
DDX41-201ENST00000330503 IGKV3D-7A0A0C4DH55 119 aa10.49□□□□□ -0.73
DDX41-201ENST00000330503 BCE1O60756 84 aa10.48□□□□□ -0.73
DDX41-201ENST00000330503 KRTAP13-1Q8IUC0 172 aa10.48□□□□□ -0.73
DDX41-201ENST00000330503 DNAH8Q96JB1 4490 aa10.47□□□□□ -0.73
DDX41-201ENST00000330503 KRTAP10-2P60368 255 aa10.47□□□□□ -0.73
DDX41-201ENST00000330503 DNAH5Q8TE73 4624 aa10.47□□□□□ -0.73
DDX41-201ENST00000330503 UBL5Q9BZL1 73 aa10.46□□□□□ -0.73
DDX41-201ENST00000330503 UBE2AP49459 152 aa10.46□□□□□ -0.74
DDX41-201ENST00000330503 FAT2Q9NYQ8 4349 aa10.45□□□□□ -0.74
DDX41-201ENST00000330503 Q6ZVQ6 151 aa10.43□□□□□ -0.74
DDX41-201ENST00000330503 PKD1P98161 4303 aa10.43□□□□□ -0.74
DDX41-201ENST00000330503 SRRM2Q9UQ35 2752 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms