RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 NKAPP1Q8N9T2 125 aa10.51□□□□□ -0.73
PDLIM1-201ENST00000329399 TRBV7-6A0A0J9YX20 115 aa10.5□□□□□ -0.73
PDLIM1-201ENST00000329399 C9orf129Q5T035 196 aaKnown RBP10.5□□□□□ -0.73
PDLIM1-201ENST00000329399 Q8N1X5 172 aa10.5□□□□□ -0.73
PDLIM1-201ENST00000329399 C9orf163Q8N9P6 203 aa10.5□□□□□ -0.73
PDLIM1-201ENST00000329399 LINC00474Q9P2X8 69 aa10.5□□□□□ -0.73
PDLIM1-201ENST00000329399 SMR3BP02814 79 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1-201ENST00000329399 Q8NDZ9 215 aa10.49□□□□□ -0.73
PDLIM1-201ENST00000329399 PRO0461Q9UI25 63 aa10.49□□□□□ -0.73
PDLIM1-201ENST00000329399 Q6ZSA8 131 aa10.49□□□□□ -0.73
PDLIM1-201ENST00000329399 H3BT86 120 aa10.48□□□□□ -0.73
PDLIM1-201ENST00000329399 TRAV23DV6A0A075B6W5 121 aa10.47□□□□□ -0.73
PDLIM1-201ENST00000329399 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
PDLIM1-201ENST00000329399 CLEC2BQ92478 149 aa10.47□□□□□ -0.73
PDLIM1-201ENST00000329399 C9JAW5 83 aa10.46□□□□□ -0.74
PDLIM1-201ENST00000329399 SLC25A20O43772 301 aa10.46□□□□□ -0.74
PDLIM1-201ENST00000329399 TRBV10-3A0A0K0K1G6 114 aa10.45□□□□□ -0.74
PDLIM1-201ENST00000329399 DNAL4O96015 105 aa10.45□□□□□ -0.74
PDLIM1-201ENST00000329399 H3BQ85 93 aa10.44□□□□□ -0.74
PDLIM1-201ENST00000329399 ANKRD29Q8N6D5 301 aa10.44□□□□□ -0.74
PDLIM1-201ENST00000329399 DIRC1Q969H9 104 aa10.44□□□□□ -0.74
PDLIM1-201ENST00000329399 PANO1I0J062 215 aa10.43□□□□□ -0.74
PDLIM1-201ENST00000329399 C6orf99Q4VX62 202 aa10.43□□□□□ -0.74
PDLIM1-201ENST00000329399 KCNQ1DNQ9H478 68 aa10.43□□□□□ -0.74
PDLIM1-201ENST00000329399 ZNF73O43830 326 aaPredicted RBP10.42□□□□□ -0.74
PDLIM1-201ENST00000329399 GHRHP01286 108 aa10.42□□□□□ -0.74
PDLIM1-201ENST00000329399 MYCBP2O75592 4640 aa10.42□□□□□ -0.74
PDLIM1-201ENST00000329399 SDIM1Q6ZPB5 146 aa10.42□□□□□ -0.74
PDLIM1-201ENST00000329399 SCXQ7RTU7 201 aa10.41□□□□□ -0.74
PDLIM1-201ENST00000329399 FLG2Q5D862 2391 aaPredicted RBP10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 J3QR89 54 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 PRYO14603 147 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 SERTAD4-AS1Q5TG53 156 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 TEN1Q86WV5 123 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 C7orf33Q8WU49 177 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 A0A096LNI7 61 aa10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 K7ERU9 68 aa10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 SMCPP49901 116 aaPredicted RBP10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 MRPL55Q7Z7F7 128 aaKnown RBP10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 FAM218AQ96MZ4 157 aa10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 LINC00167Q96N53 147 aa10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 COX7BP24311 80 aa10.38□□□□□ -0.75
PDLIM1-201ENST00000329399 Q5VSD8 79 aa10.38□□□□□ -0.75
PDLIM1-201ENST00000329399 LINC00575Q6W349 94 aa10.38□□□□□ -0.75
PDLIM1-201ENST00000329399 CIRBP-AS1Q8TBR5 109 aa10.38□□□□□ -0.75
PDLIM1-201ENST00000329399 IGLV1-50A0A075B6I6 118 aa10.37□□□□□ -0.75
PDLIM1-201ENST00000329399 EPM2AB3EWF7 344 aa10.37□□□□□ -0.75
PDLIM1-201ENST00000329399 INAFM2P0DMQ5 153 aa10.37□□□□□ -0.75
PDLIM1-201ENST00000329399 ELOF1P60002 83 aaKnown RBP10.37□□□□□ -0.75
PDLIM1-201ENST00000329399 ETDBQ3ZM63 59 aa10.37□□□□□ -0.75
PDLIM1-201ENST00000329399 hADV29S1A0JD25 119 aa10.36□□□□□ -0.75
PDLIM1-201ENST00000329399 OCIAD2Q56VL3 154 aa10.36□□□□□ -0.75
PDLIM1-201ENST00000329399 A0A087WYN8 130 aa10.36□□□□□ -0.75
PDLIM1-201ENST00000329399 BAALC-AS2P0C853 105 aa10.36□□□□□ -0.75
PDLIM1-201ENST00000329399 ORMDL1Q9P0S3 153 aa10.36□□□□□ -0.75
PDLIM1-201ENST00000329399 CHTF8P0CG12 524 aa10.35□□□□□ -0.75
PDLIM1-201ENST00000329399 FAM19A5Q7Z5A7 132 aaPredicted RBP10.35□□□□□ -0.75
PDLIM1-201ENST00000329399 MTURNQ8N3F0 131 aa10.35□□□□□ -0.75
PDLIM1-201ENST00000329399 PPDPFLQ8WWR9 84 aa10.35□□□□□ -0.75
PDLIM1-201ENST00000329399 IGKV2-24A0A0C4DH68 120 aa10.34□□□□□ -0.75
PDLIM1-201ENST00000329399 TMEM256-PLSCR3K7ERE1 68 aa10.34□□□□□ -0.75
PDLIM1-201ENST00000329399 SPRR1AP35321 89 aa10.34□□□□□ -0.75
PDLIM1-201ENST00000329399 FAM168BA1KXE4 195 aa10.33□□□□□ -0.76
PDLIM1-201ENST00000329399 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.32□□□□□ -0.76
PDLIM1-201ENST00000329399 KRTAP7-1Q8IUC3 87 aa10.32□□□□□ -0.76
PDLIM1-201ENST00000329399 LINC00528Q8N1L1 170 aa10.31□□□□□ -0.76
PDLIM1-201ENST00000329399 DHRS4-AS1Q9P1J3 65 aa10.31□□□□□ -0.76
PDLIM1-201ENST00000329399 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
PDLIM1-201ENST00000329399 ETDCA0A1B0GVM5 59 aa10.29□□□□□ -0.76
PDLIM1-201ENST00000329399 A0A1W2PNN7 141 aa10.29□□□□□ -0.76
PDLIM1-201ENST00000329399 FAM229AH3BQW9 127 aa10.29□□□□□ -0.76
PDLIM1-201ENST00000329399 SPACA4Q8TDM5 124 aa10.29□□□□□ -0.76
PDLIM1-201ENST00000329399 LRP1Q07954 4544 aaKnown RBP10.28□□□□□ -0.76
PDLIM1-201ENST00000329399 KRTAP4-16G5E9R7 235 aaPredicted RBP10.28□□□□□ -0.76
PDLIM1-201ENST00000329399 REG3GQ6UW15 175 aa10.28□□□□□ -0.76
PDLIM1-201ENST00000329399 HERC1Q15751 4861 aa10.28□□□□□ -0.76
PDLIM1-201ENST00000329399 RPL37AP8A6NKH3 93 aa10.27□□□□□ -0.77
PDLIM1-201ENST00000329399 DPH3Q96FX2 82 aa10.27□□□□□ -0.77
PDLIM1-201ENST00000329399 JMJD7-PLA2G4BH0Y9G9 81 aa10.26□□□□□ -0.77
PDLIM1-201ENST00000329399 Q6ZRX8 168 aa10.26□□□□□ -0.77
PDLIM1-201ENST00000329399 B5MCH6 92 aa10.25□□□□□ -0.77
PDLIM1-201ENST00000329399 PKHD1L1Q86WI1 4243 aa10.24□□□□□ -0.77
PDLIM1-201ENST00000329399 C21orf62-AS1Q17RA5 79 aa10.24□□□□□ -0.77
PDLIM1-201ENST00000329399 H0Y9J4 135 aa10.23□□□□□ -0.77
PDLIM1-201ENST00000329399 UBE2BP63146 152 aa10.23□□□□□ -0.77
PDLIM1-201ENST00000329399 Q6ZQY7 126 aa10.23□□□□□ -0.77
PDLIM1-201ENST00000329399 OBSCN-AS1Q96MR7 158 aa10.23□□□□□ -0.77
PDLIM1-201ENST00000329399 TEX49A0A1B0GTD5 131 aa10.22□□□□□ -0.77
PDLIM1-201ENST00000329399 PLAC8Q9NZF1 115 aa10.22□□□□□ -0.77
PDLIM1-201ENST00000329399 DMBT1Q9UGM3 2413 aaPredicted RBP10.21□□□□□ -0.77
PDLIM1-201ENST00000329399 FAT3Q8TDW7 4589 aa10.2□□□□□ -0.78
PDLIM1-201ENST00000329399 PLA2G1BP04054 148 aaKnown RBP10.19□□□□□ -0.78
PDLIM1-201ENST00000329399 ACYP1P07311 99 aa10.18□□□□□ -0.78
PDLIM1-201ENST00000329399 PHF5AQ7RTV0 110 aaKnown RBP10.18□□□□□ -0.78
PDLIM1-201ENST00000329399 FAM240AA0A1B0GVK7 77 aa10.17□□□□□ -0.78
PDLIM1-201ENST00000329399 PDE6GP18545 87 aa10.17□□□□□ -0.78
PDLIM1-201ENST00000329399 FAM19A1Q7Z5A9 133 aa10.16□□□□□ -0.78
PDLIM1-201ENST00000329399 BCE1O60756 84 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms