RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 PRYO14603 147 aa9.55□□□□□ -0.88
TPM3-205ENST00000328159 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.55□□□□□ -0.88
TPM3-205ENST00000328159 IGKV2-24A0A0C4DH68 120 aa9.54□□□□□ -0.88
TPM3-205ENST00000328159 Q6ZR54 194 aa9.54□□□□□ -0.88
TPM3-205ENST00000328159 C14orf132Q9NPU4 83 aa9.54□□□□□ -0.88
TPM3-205ENST00000328159 C9orf163Q8N9P6 203 aa9.53□□□□□ -0.88
TPM3-205ENST00000328159 JMJD7-PLA2G4BH0Y9G9 81 aa9.52□□□□□ -0.88
TPM3-205ENST00000328159 H3BQ85 93 aa9.52□□□□□ -0.88
TPM3-205ENST00000328159 ACYP1P07311 99 aa9.52□□□□□ -0.88
TPM3-205ENST00000328159 XGP55808 180 aa9.52□□□□□ -0.88
TPM3-205ENST00000328159 A0A1B0GV72 72 aa9.51□□□□□ -0.89
TPM3-205ENST00000328159 PKIGQ9Y2B9 76 aa9.51□□□□□ -0.89
TPM3-205ENST00000328159 A0A1W2PNN7 141 aa9.5□□□□□ -0.89
TPM3-205ENST00000328159 SPRR1AP35321 89 aa9.5□□□□□ -0.89
TPM3-205ENST00000328159 GAGE2AQ6NT46 116 aa9.5□□□□□ -0.89
TPM3-205ENST00000328159 WWC2-AS2Q96NR7 200 aa9.5□□□□□ -0.89
TPM3-205ENST00000328159 KRTAP4-16G5E9R7 235 aaPredicted RBP9.5□□□□□ -0.89
TPM3-205ENST00000328159 MT-ATP8P03928 68 aa9.5□□□□□ -0.89
TPM3-205ENST00000328159 A0A087WTM6 91 aa9.49□□□□□ -0.89
TPM3-205ENST00000328159 GHRHP01286 108 aa9.49□□□□□ -0.89
TPM3-205ENST00000328159 ETDCA0A1B0GVM5 59 aa9.48□□□□□ -0.89
TPM3-205ENST00000328159 B5MCH6 92 aa9.48□□□□□ -0.89
TPM3-205ENST00000328159 CHTF8P0CG12 524 aa9.48□□□□□ -0.89
TPM3-205ENST00000328159 SDIM1Q6ZPB5 146 aa9.47□□□□□ -0.89
TPM3-205ENST00000328159 Q6ZRX8 168 aa9.47□□□□□ -0.89
TPM3-205ENST00000328159 LAMTOR3Q9UHA4 124 aa9.47□□□□□ -0.89
TPM3-205ENST00000328159 LY6G6CO95867 125 aa9.47□□□□□ -0.89
TPM3-205ENST00000328159 REG3GQ6UW15 175 aa9.46□□□□□ -0.9
TPM3-205ENST00000328159 DHRS4-AS1Q9P1J3 65 aa9.46□□□□□ -0.9
TPM3-205ENST00000328159 CCKP06307 115 aa9.45□□□□□ -0.9
TPM3-205ENST00000328159 RBM3P98179 157 aaKnown RBP9.45□□□□□ -0.9
TPM3-205ENST00000328159 C1orf134Q5TEV5 83 aa9.44□□□□□ -0.9
TPM3-205ENST00000328159 LINC00476Q8WZB0 136 aa9.44□□□□□ -0.9
TPM3-205ENST00000328159 Q9BRP9 147 aa9.44□□□□□ -0.9
TPM3-205ENST00000328159 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
TPM3-205ENST00000328159 PCP4P48539 62 aa9.43□□□□□ -0.9
TPM3-205ENST00000328159 SCGB1A1P11684 91 aa9.42□□□□□ -0.9
TPM3-205ENST00000328159 SMCR5Q8TEV8 140 aa9.42□□□□□ -0.9
TPM3-205ENST00000328159 TGP01266 2768 aa9.42□□□□□ -0.9
TPM3-205ENST00000328159 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
TPM3-205ENST00000328159 NDUFV3P56181 108 aaKnown RBP9.41□□□□□ -0.9
TPM3-205ENST00000328159 DNAH6Q9C0G6 4158 aa9.41□□□□□ -0.9
TPM3-205ENST00000328159 LOC110117498A0A087WWA1 95 aa9.4□□□□□ -0.9
TPM3-205ENST00000328159 PANO1I0J062 215 aa9.4□□□□□ -0.9
TPM3-205ENST00000328159 RTL8CO15255 209 aa9.4□□□□□ -0.91
TPM3-205ENST00000328159 UBE2BP63146 152 aa9.4□□□□□ -0.91
TPM3-205ENST00000328159 Q6ZQT0 140 aa9.4□□□□□ -0.91
TPM3-205ENST00000328159 C3orf84H3BNL1 204 aa9.39□□□□□ -0.91
TPM3-205ENST00000328159 LINC00643Q86TS7 51 aa9.39□□□□□ -0.91
TPM3-205ENST00000328159 DSCR8Q96T75 97 aa9.39□□□□□ -0.91
TPM3-205ENST00000328159 ALMS1Q8TCU4 4167 aa9.38□□□□□ -0.91
TPM3-205ENST00000328159 KMT2AQ03164 3969 aa9.38□□□□□ -0.91
TPM3-205ENST00000328159 Q8N377 158 aa9.38□□□□□ -0.91
TPM3-205ENST00000328159 DEFB105AQ8NG35 78 aa9.38□□□□□ -0.91
TPM3-205ENST00000328159 LINC00846Q9NV44 126 aa9.38□□□□□ -0.91
TPM3-205ENST00000328159 DNAH2Q9P225 4427 aa9.38□□□□□ -0.91
TPM3-205ENST00000328159 FUSP35637 526 aaKnown RBP eCLIP9.37□□□□□ -0.91
TPM3-205ENST00000328159 LINC01547P58512 204 aaPredicted RBP9.37□□□□□ -0.91
TPM3-205ENST00000328159 SPACA4Q8TDM5 124 aa9.37□□□□□ -0.91
TPM3-205ENST00000328159 DPH3Q96FX2 82 aa9.37□□□□□ -0.91
TPM3-205ENST00000328159 DNAH17Q9UFH2 4485 aa9.37□□□□□ -0.91
TPM3-205ENST00000328159 ERC2-IT1O76042 136 aa9.37□□□□□ -0.91
TPM3-205ENST00000328159 PDE6GP18545 87 aa9.37□□□□□ -0.91
TPM3-205ENST00000328159 FAM19A1Q7Z5A9 133 aa9.37□□□□□ -0.91
TPM3-205ENST00000328159 KRTAP11-1Q8IUC1 163 aa9.37□□□□□ -0.91
TPM3-205ENST00000328159 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
TPM3-205ENST00000328159 ST20-AS1Q8NBB2 130 aa9.36□□□□□ -0.91
TPM3-205ENST00000328159 TRBV7-4A0A0J9YYF1 115 aa9.35□□□□□ -0.91
TPM3-205ENST00000328159 IGLV5-48A0A075B6I7 105 aa9.35□□□□□ -0.91
TPM3-205ENST00000328159 PRLHP81277 87 aa9.34□□□□□ -0.91
TPM3-205ENST00000328159 IGLV5-52A0A0A0MRZ9 124 aa9.33□□□□□ -0.92
TPM3-205ENST00000328159 TRBV7-7A0A0K0K1E9 115 aa9.33□□□□□ -0.92
TPM3-205ENST00000328159 EPM2AB3EWF7 344 aa9.33□□□□□ -0.92
TPM3-205ENST00000328159 Q6Q795 121 aa9.33□□□□□ -0.92
TPM3-205ENST00000328159 TNP2Q05952 138 aa9.32□□□□□ -0.92
TPM3-205ENST00000328159 C21orf62-AS1Q17RA5 79 aa9.32□□□□□ -0.92
TPM3-205ENST00000328159 H0Y9J4 135 aa9.29□□□□□ -0.92
TPM3-205ENST00000328159 Q6JHZ5 121 aa9.29□□□□□ -0.92
TPM3-205ENST00000328159 C3orf22Q8N5N4 141 aa9.29□□□□□ -0.92
TPM3-205ENST00000328159 HIGD2AQ9BW72 106 aa9.29□□□□□ -0.92
TPM3-205ENST00000328159 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
TPM3-205ENST00000328159 HECTD4Q9Y4D8 3996 aa9.28□□□□□ -0.92
TPM3-205ENST00000328159 BCE1O60756 84 aa9.27□□□□□ -0.92
TPM3-205ENST00000328159 UBL5Q9BZL1 73 aa9.27□□□□□ -0.92
TPM3-205ENST00000328159 UBE2AP49459 152 aa9.27□□□□□ -0.93
TPM3-205ENST00000328159 PLAC8Q9NZF1 115 aa9.27□□□□□ -0.93
TPM3-205ENST00000328159 IGKV3D-7A0A0C4DH55 119 aa9.25□□□□□ -0.93
TPM3-205ENST00000328159 SMIM29Q86T20 159 aa9.24□□□□□ -0.93
TPM3-205ENST00000328159 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
TPM3-205ENST00000328159 KRTAP10-2P60368 255 aa9.22□□□□□ -0.93
TPM3-205ENST00000328159 ATP5EP2Q5VTU8 51 aa9.22□□□□□ -0.93
TPM3-205ENST00000328159 Q6ZVQ6 151 aa9.22□□□□□ -0.93
TPM3-205ENST00000328159 F8WEM9 126 aa9.21□□□□□ -0.94
TPM3-205ENST00000328159 C1orf137Q5JT78 98 aa9.21□□□□□ -0.94
TPM3-205ENST00000328159 SPRR1BP22528 89 aa9.19□□□□□ -0.94
TPM3-205ENST00000328159 FRAS1Q86XX4 4008 aa9.19□□□□□ -0.94
TPM3-205ENST00000328159 DNAH11Q96DT5 4516 aa9.18□□□□□ -0.94
TPM3-205ENST00000328159 PSORS1C2Q9UIG4 136 aa9.18□□□□□ -0.94
TPM3-205ENST00000328159 A0A1W2PNM2 257 aa9.17□□□□□ -0.94
TPM3-205ENST00000328159 FAM236AA0A1B0GUQ0 79 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms