RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 INAFM2P0DMQ5 153 aa13.42□□□□□ -0.26
YBX3-202ENST00000279550 C14orf132Q9NPU4 83 aa13.42□□□□□ -0.26
YBX3-202ENST00000279550 SNCGO76070 127 aa13.42□□□□□ -0.26
YBX3-202ENST00000279550 DNAH2Q9P225 4427 aa13.42□□□□□ -0.26
YBX3-202ENST00000279550 PCP4P48539 62 aa13.41□□□□□ -0.26
YBX3-202ENST00000279550 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.4□□□□□ -0.26
YBX3-202ENST00000279550 KCNQ1DNQ9H478 68 aa13.4□□□□□ -0.26
YBX3-202ENST00000279550 HYDINQ4G0P3 5121 aa13.4□□□□□ -0.27
YBX3-202ENST00000279550 Q6ZQY7 126 aa13.39□□□□□ -0.27
YBX3-202ENST00000279550 FAM19A5Q7Z5A7 132 aaPredicted RBP13.39□□□□□ -0.27
YBX3-202ENST00000279550 LINC00528Q8N1L1 170 aa13.39□□□□□ -0.27
YBX3-202ENST00000279550 A0A087WTM6 91 aa13.39□□□□□ -0.27
YBX3-202ENST00000279550 TMEM256-PLSCR3K7ERE1 68 aa13.39□□□□□ -0.27
YBX3-202ENST00000279550 A0A096LNI7 61 aa13.38□□□□□ -0.27
YBX3-202ENST00000279550 RPL37AP8A6NKH3 93 aa13.38□□□□□ -0.27
YBX3-202ENST00000279550 GAGE2AQ6NT46 116 aa13.36□□□□□ -0.27
YBX3-202ENST00000279550 SACSQ9NZJ4 4579 aa13.36□□□□□ -0.27
YBX3-202ENST00000279550 IGLV1-50A0A075B6I6 118 aa13.36□□□□□ -0.27
YBX3-202ENST00000279550 RTL8CO15255 209 aa13.34□□□□□ -0.27
YBX3-202ENST00000279550 ACYP1P07311 99 aa13.33□□□□□ -0.27
YBX3-202ENST00000279550 C21orf62-AS1Q17RA5 79 aa13.33□□□□□ -0.27
YBX3-202ENST00000279550 IGKV2-24A0A0C4DH68 120 aa13.33□□□□□ -0.28
YBX3-202ENST00000279550 C16orf90A8MZG2 172 aa13.33□□□□□ -0.28
YBX3-202ENST00000279550 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.33□□□□□ -0.28
YBX3-202ENST00000279550 MRPL55Q7Z7F7 128 aaKnown RBP13.32□□□□□ -0.28
YBX3-202ENST00000279550 SMCR5Q8TEV8 140 aa13.32□□□□□ -0.28
YBX3-202ENST00000279550 PRYO14603 147 aa13.31□□□□□ -0.28
YBX3-202ENST00000279550 TNP2Q05952 138 aa13.31□□□□□ -0.28
YBX3-202ENST00000279550 A0A1W2PNN7 141 aa13.3□□□□□ -0.28
YBX3-202ENST00000279550 KRTAP4-16G5E9R7 235 aaPredicted RBP13.3□□□□□ -0.28
YBX3-202ENST00000279550 JMJD7-PLA2G4BH0Y9G9 81 aa13.3□□□□□ -0.28
YBX3-202ENST00000279550 FRAS1Q86XX4 4008 aa13.28□□□□□ -0.28
YBX3-202ENST00000279550 SPRR1AP35321 89 aa13.28□□□□□ -0.28
YBX3-202ENST00000279550 DNAH17Q9UFH2 4485 aa13.28□□□□□ -0.28
YBX3-202ENST00000279550 CHTF8P0CG12 524 aa13.27□□□□□ -0.28
YBX3-202ENST00000279550 SCGB1A1P11684 91 aa13.27□□□□□ -0.28
YBX3-202ENST00000279550 C9orf163Q8N9P6 203 aa13.27□□□□□ -0.28
YBX3-202ENST00000279550 B5MCH6 92 aa13.27□□□□□ -0.29
YBX3-202ENST00000279550 SDIM1Q6ZPB5 146 aa13.27□□□□□ -0.29
YBX3-202ENST00000279550 LAMTOR3Q9UHA4 124 aa13.26□□□□□ -0.29
YBX3-202ENST00000279550 CCKP06307 115 aa13.25□□□□□ -0.29
YBX3-202ENST00000279550 H3BQ85 93 aa13.25□□□□□ -0.29
YBX3-202ENST00000279550 Q6ZRX8 168 aa13.24□□□□□ -0.29
YBX3-202ENST00000279550 Q9BRP9 147 aa13.24□□□□□ -0.29
YBX3-202ENST00000279550 ETDCA0A1B0GVM5 59 aa13.23□□□□□ -0.29
YBX3-202ENST00000279550 KMT2CQ8NEZ4 4911 aaKnown RBP13.22□□□□□ -0.29
YBX3-202ENST00000279550 FUSP35637 526 aaKnown RBP eCLIP13.22□□□□□ -0.29
YBX3-202ENST00000279550 RBM3P98179 157 aaKnown RBP13.22□□□□□ -0.29
YBX3-202ENST00000279550 LINC00846Q9NV44 126 aa13.21□□□□□ -0.3
YBX3-202ENST00000279550 REG3GQ6UW15 175 aa13.19□□□□□ -0.3
YBX3-202ENST00000279550 Q6ZQT0 140 aa13.19□□□□□ -0.3
YBX3-202ENST00000279550 PKIGQ9Y2B9 76 aa13.19□□□□□ -0.3
YBX3-202ENST00000279550 IGLV5-52A0A0A0MRZ9 124 aa13.19□□□□□ -0.3
YBX3-202ENST00000279550 PANO1I0J062 215 aa13.19□□□□□ -0.3
YBX3-202ENST00000279550 LINC00643Q86TS7 51 aa13.19□□□□□ -0.3
YBX3-202ENST00000279550 DHRS4-AS1Q9P1J3 65 aa13.19□□□□□ -0.3
YBX3-202ENST00000279550 LOC110117498A0A087WWA1 95 aa13.18□□□□□ -0.3
YBX3-202ENST00000279550 NDUFV3P56181 108 aaKnown RBP13.17□□□□□ -0.3
YBX3-202ENST00000279550 LINC01547P58512 204 aaPredicted RBP13.17□□□□□ -0.3
YBX3-202ENST00000279550 FAT2Q9NYQ8 4349 aa13.17□□□□□ -0.3
YBX3-202ENST00000279550 PHF5AQ7RTV0 110 aaKnown RBP13.16□□□□□ -0.3
YBX3-202ENST00000279550 KRTAP11-1Q8IUC1 163 aa13.16□□□□□ -0.3
YBX3-202ENST00000279550 ERC2-IT1O76042 136 aa13.16□□□□□ -0.3
YBX3-202ENST00000279550 GHRHP01286 108 aa13.16□□□□□ -0.3
YBX3-202ENST00000279550 KRTAP10-2P60368 255 aa13.15□□□□□ -0.3
YBX3-202ENST00000279550 Q8N377 158 aa13.15□□□□□ -0.3
YBX3-202ENST00000279550 DEFB105AQ8NG35 78 aa13.15□□□□□ -0.3
YBX3-202ENST00000279550 HECTD4Q9Y4D8 3996 aa13.14□□□□□ -0.31
YBX3-202ENST00000279550 LINC00336Q6ZUF6 198 aa13.14□□□□□ -0.31
YBX3-202ENST00000279550 ST20-AS1Q8NBB2 130 aa13.14□□□□□ -0.31
YBX3-202ENST00000279550 TRBV7-7A0A0K0K1E9 115 aa13.13□□□□□ -0.31
YBX3-202ENST00000279550 RYR2Q92736 4967 aa13.13□□□□□ -0.31
YBX3-202ENST00000279550 Q6Q795 121 aa13.13□□□□□ -0.31
YBX3-202ENST00000279550 TRBV7-4A0A0J9YYF1 115 aa13.12□□□□□ -0.31
YBX3-202ENST00000279550 DSCR8Q96T75 97 aa13.12□□□□□ -0.31
YBX3-202ENST00000279550 UBE2BP63146 152 aa13.11□□□□□ -0.31
YBX3-202ENST00000279550 LINC00474Q9P2X8 69 aa13.11□□□□□ -0.31
YBX3-202ENST00000279550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.1□□□□□ -0.31
YBX3-202ENST00000279550 DNAH11Q96DT5 4516 aa13.09□□□□□ -0.31
YBX3-202ENST00000279550 FAM19A1Q7Z5A9 133 aa13.08□□□□□ -0.32
YBX3-202ENST00000279550 PRLHP81277 87 aa13.08□□□□□ -0.32
YBX3-202ENST00000279550 IGLV5-48A0A075B6I7 105 aa13.07□□□□□ -0.32
YBX3-202ENST00000279550 C3orf22Q8N5N4 141 aa13.07□□□□□ -0.32
YBX3-202ENST00000279550 SPACA4Q8TDM5 124 aa13.07□□□□□ -0.32
YBX3-202ENST00000279550 PDE6GP18545 87 aa13.06□□□□□ -0.32
YBX3-202ENST00000279550 Q6JHZ5 121 aa13.06□□□□□ -0.32
YBX3-202ENST00000279550 IGKV3D-7A0A0C4DH55 119 aa13.05□□□□□ -0.32
YBX3-202ENST00000279550 PKD1P98161 4303 aa13.03□□□□□ -0.32
YBX3-202ENST00000279550 DPH3Q96FX2 82 aa13.02□□□□□ -0.32
YBX3-202ENST00000279550 IMUPQ9GZP8 106 aa13.02□□□□□ -0.32
YBX3-202ENST00000279550 EPM2AB3EWF7 344 aa13.01□□□□□ -0.33
YBX3-202ENST00000279550 DNAH5Q8TE73 4624 aa13□□□□□ -0.33
YBX3-202ENST00000279550 A0A1B0GVY2 172 aa12.99□□□□□ -0.33
YBX3-202ENST00000279550 HIGD2AQ9BW72 106 aa12.99□□□□□ -0.33
YBX3-202ENST00000279550 UBL5Q9BZL1 73 aa12.98□□□□□ -0.33
YBX3-202ENST00000279550 SMIM29Q86T20 159 aa12.97□□□□□ -0.33
YBX3-202ENST00000279550 KRTAP10-1P60331 282 aa12.96□□□□□ -0.33
YBX3-202ENST00000279550 Q6ZVQ6 151 aa12.95□□□□□ -0.34
YBX3-202ENST00000279550 PLAC8Q9NZF1 115 aa12.94□□□□□ -0.34
YBX3-202ENST00000279550 H0Y9J4 135 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms