RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 A0A096LNI7 61 aa6.13□□□□□ -1.43
TRIM55-201ENST00000276573 A0A1B0GV72 72 aa6.13□□□□□ -1.43
TRIM55-201ENST00000276573 CCKP06307 115 aa6.13□□□□□ -1.43
TRIM55-201ENST00000276573 SDIM1Q6ZPB5 146 aa6.13□□□□□ -1.43
TRIM55-201ENST00000276573 CSMD3Q7Z407 3707 aa6.12□□□□□ -1.43
TRIM55-201ENST00000276573 KRTAP4-16G5E9R7 235 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-201ENST00000276573 M0R2N4 97 aa6.12□□□□□ -1.43
TRIM55-201ENST00000276573 GHRHP01286 108 aa6.12□□□□□ -1.43
TRIM55-201ENST00000276573 SPRR1AP35321 89 aa6.12□□□□□ -1.43
TRIM55-201ENST00000276573 C9orf163Q8N9P6 203 aa6.11□□□□□ -1.43
TRIM55-201ENST00000276573 SMCR5Q8TEV8 140 aa6.11□□□□□ -1.43
TRIM55-201ENST00000276573 LAMTOR3Q9UHA4 124 aa6.11□□□□□ -1.43
TRIM55-201ENST00000276573 IGKV2-24A0A0C4DH68 120 aa6.11□□□□□ -1.43
TRIM55-201ENST00000276573 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
TRIM55-201ENST00000276573 B5MCH6 92 aa6.11□□□□□ -1.43
TRIM55-201ENST00000276573 RBM3P98179 157 aaKnown RBP6.11□□□□□ -1.43
TRIM55-201ENST00000276573 TENM2Q9NT68 2774 aa6.1□□□□□ -1.43
TRIM55-201ENST00000276573 LINC00643Q86TS7 51 aa6.1□□□□□ -1.43
TRIM55-201ENST00000276573 ETDCA0A1B0GVM5 59 aa6.09□□□□□ -1.43
TRIM55-201ENST00000276573 Q6Q795 121 aa6.09□□□□□ -1.43
TRIM55-201ENST00000276573 Q6ZR54 194 aa6.09□□□□□ -1.43
TRIM55-201ENST00000276573 Q6ZRX8 168 aa6.09□□□□□ -1.43
TRIM55-201ENST00000276573 DHRS4-AS1Q9P1J3 65 aa6.09□□□□□ -1.43
TRIM55-201ENST00000276573 LOC110117498A0A087WWA1 95 aa6.08□□□□□ -1.44
TRIM55-201ENST00000276573 LINC00846Q9NV44 126 aa6.08□□□□□ -1.44
TRIM55-201ENST00000276573 NDUFV3P56181 108 aaKnown RBP6.07□□□□□ -1.44
TRIM55-201ENST00000276573 Q6ZQT0 140 aa6.07□□□□□ -1.44
TRIM55-201ENST00000276573 LYSTQ99698 3801 aa6.07□□□□□ -1.44
TRIM55-201ENST00000276573 Q9BRP9 147 aa6.07□□□□□ -1.44
TRIM55-201ENST00000276573 PKIGQ9Y2B9 76 aa6.07□□□□□ -1.44
TRIM55-201ENST00000276573 DNAH7Q8WXX0 4024 aa6.07□□□□□ -1.44
TRIM55-201ENST00000276573 CHTF8P0CG12 524 aa6.07□□□□□ -1.44
TRIM55-201ENST00000276573 REG3GQ6UW15 175 aa6.07□□□□□ -1.44
TRIM55-201ENST00000276573 DSCR8Q96T75 97 aa6.07□□□□□ -1.44
TRIM55-201ENST00000276573 PRKDCP78527 4128 aaKnown RBP6.06□□□□□ -1.44
TRIM55-201ENST00000276573 PLECQ15149 4684 aaKnown RBP6.06□□□□□ -1.44
TRIM55-201ENST00000276573 A0A087WTM6 91 aa6.06□□□□□ -1.44
TRIM55-201ENST00000276573 TRBV7-7A0A0K0K1E9 115 aa6.06□□□□□ -1.44
TRIM55-201ENST00000276573 PDE6GP18545 87 aa6.06□□□□□ -1.44
TRIM55-201ENST00000276573 LINC01547P58512 204 aaPredicted RBP6.05□□□□□ -1.44
TRIM55-201ENST00000276573 Q8N377 158 aa6.05□□□□□ -1.44
TRIM55-201ENST00000276573 DEFB105AQ8NG35 78 aa6.05□□□□□ -1.44
TRIM55-201ENST00000276573 IMUPQ9GZP8 106 aa6.05□□□□□ -1.44
TRIM55-201ENST00000276573 TRBV7-4A0A0J9YYF1 115 aa6.04□□□□□ -1.44
TRIM55-201ENST00000276573 LINC00474Q9P2X8 69 aa6.04□□□□□ -1.44
TRIM55-201ENST00000276573 DNAH10Q8IVF4 4471 aa6.04□□□□□ -1.44
TRIM55-201ENST00000276573 UBE2BP63146 152 aa6.04□□□□□ -1.44
TRIM55-201ENST00000276573 PHF5AQ7RTV0 110 aaKnown RBP6.04□□□□□ -1.44
TRIM55-201ENST00000276573 FBN3Q75N90 2809 aa6.03□□□□□ -1.44
TRIM55-201ENST00000276573 ERC2-IT1O76042 136 aa6.03□□□□□ -1.44
TRIM55-201ENST00000276573 VPS13DQ5THJ4 4388 aa6.03□□□□□ -1.44
TRIM55-201ENST00000276573 PANO1I0J062 215 aa6.02□□□□□ -1.45
TRIM55-201ENST00000276573 Q6JHZ5 121 aa6.02□□□□□ -1.45
TRIM55-201ENST00000276573 WWC2-AS2Q96NR7 200 aa6.02□□□□□ -1.45
TRIM55-201ENST00000276573 STARD9Q9P2P6 4700 aa6.02□□□□□ -1.45
TRIM55-201ENST00000276573 IGLV5-48A0A075B6I7 105 aa6.02□□□□□ -1.45
TRIM55-201ENST00000276573 LY6G6CO95867 125 aa6.02□□□□□ -1.45
TRIM55-201ENST00000276573 C1orf134Q5TEV5 83 aa6.02□□□□□ -1.45
TRIM55-201ENST00000276573 ST20-AS1Q8NBB2 130 aa6.02□□□□□ -1.45
TRIM55-201ENST00000276573 FAM19A1Q7Z5A9 133 aa6.01□□□□□ -1.45
TRIM55-201ENST00000276573 KRTAP11-1Q8IUC1 163 aa6.01□□□□□ -1.45
TRIM55-201ENST00000276573 DPH3Q96FX2 82 aa6.01□□□□□ -1.45
TRIM55-201ENST00000276573 IGKV3D-7A0A0C4DH55 119 aa6□□□□□ -1.45
TRIM55-201ENST00000276573 EPM2AB3EWF7 344 aa6□□□□□ -1.45
TRIM55-201ENST00000276573 UBL5Q9BZL1 73 aa6□□□□□ -1.45
TRIM55-201ENST00000276573 SPACA4Q8TDM5 124 aa5.99□□□□□ -1.45
TRIM55-201ENST00000276573 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.99□□□□□ -1.45
TRIM55-201ENST00000276573 RTL8CO15255 209 aa5.98□□□□□ -1.45
TRIM55-201ENST00000276573 FUSP35637 526 aaKnown RBP eCLIP5.98□□□□□ -1.45
TRIM55-201ENST00000276573 PRLHP81277 87 aa5.98□□□□□ -1.45
TRIM55-201ENST00000276573 LINC00476Q8WZB0 136 aa5.98□□□□□ -1.45
TRIM55-201ENST00000276573 H0Y9J4 135 aa5.98□□□□□ -1.45
TRIM55-201ENST00000276573 C3orf22Q8N5N4 141 aa5.98□□□□□ -1.45
TRIM55-201ENST00000276573 TNP2Q05952 138 aa5.97□□□□□ -1.45
TRIM55-201ENST00000276573 ATP5EP2Q5VTU8 51 aa5.97□□□□□ -1.45
TRIM55-201ENST00000276573 SMIM29Q86T20 159 aa5.97□□□□□ -1.45
TRIM55-201ENST00000276573 ANAPC13Q9BS18 74 aa5.97□□□□□ -1.45
TRIM55-201ENST00000276573 Q6ZVQ6 151 aa5.96□□□□□ -1.46
TRIM55-201ENST00000276573 HIGD2AQ9BW72 106 aa5.96□□□□□ -1.46
TRIM55-201ENST00000276573 C3orf84H3BNL1 204 aa5.95□□□□□ -1.46
TRIM55-201ENST00000276573 IGLV5-52A0A0A0MRZ9 124 aa5.95□□□□□ -1.46
TRIM55-201ENST00000276573 FAM236AA0A1B0GUQ0 79 aa5.95□□□□□ -1.46
TRIM55-201ENST00000276573 FAM236BA0A1B0GV22 79 aa5.95□□□□□ -1.46
TRIM55-201ENST00000276573 BCE1O60756 84 aa5.95□□□□□ -1.46
TRIM55-201ENST00000276573 C1orf137Q5JT78 98 aa5.94□□□□□ -1.46
TRIM55-201ENST00000276573 UBE2AP49459 152 aa5.93□□□□□ -1.46
TRIM55-201ENST00000276573 HAMPP81172 84 aa5.93□□□□□ -1.46
TRIM55-201ENST00000276573 A0A1W2PNM2 257 aa5.93□□□□□ -1.46
TRIM55-201ENST00000276573 PLAC8Q9NZF1 115 aa5.93□□□□□ -1.46
TRIM55-201ENST00000276573 A0A1B0GW54 56 aa5.92□□□□□ -1.46
TRIM55-201ENST00000276573 HIST1H4AP62805 103 aaKnown RBP5.92□□□□□ -1.46
TRIM55-201ENST00000276573 KRTAP13-1Q8IUC0 172 aa5.92□□□□□ -1.46
TRIM55-201ENST00000276573 TGP01266 2768 aa5.92□□□□□ -1.46
TRIM55-201ENST00000276573 A0A087WVE0 104 aa5.91□□□□□ -1.46
TRIM55-201ENST00000276573 SPRR1BP22528 89 aa5.91□□□□□ -1.46
TRIM55-201ENST00000276573 F8WEM9 126 aa5.91□□□□□ -1.46
TRIM55-201ENST00000276573 CXCL6P80162 114 aa5.91□□□□□ -1.46
TRIM55-201ENST00000276573 IGLV8-61A0A075B6I0 122 aa5.9□□□□□ -1.46
TRIM55-201ENST00000276573 NREPQ16612 68 aa5.9□□□□□ -1.46
TRIM55-201ENST00000276573 Q8NBF4 154 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms