RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.61□□□□□ -0.23
GFRA3-201ENST00000274721 RPL37AP8A6NKH3 93 aa13.61□□□□□ -0.23
GFRA3-201ENST00000274721 SPRR1AP35321 89 aa13.61□□□□□ -0.23
GFRA3-201ENST00000274721 KMT2AQ03164 3969 aa13.6□□□□□ -0.23
GFRA3-201ENST00000274721 KRTAP4-16G5E9R7 235 aaPredicted RBP13.6□□□□□ -0.23
GFRA3-201ENST00000274721 PRYO14603 147 aa13.6□□□□□ -0.23
GFRA3-201ENST00000274721 XGP55808 180 aa13.6□□□□□ -0.23
GFRA3-201ENST00000274721 H3BQ85 93 aa13.59□□□□□ -0.23
GFRA3-201ENST00000274721 ACYP1P07311 99 aa13.59□□□□□ -0.23
GFRA3-201ENST00000274721 C14orf132Q9NPU4 83 aa13.59□□□□□ -0.23
GFRA3-201ENST00000274721 JMJD7-PLA2G4BH0Y9G9 81 aa13.59□□□□□ -0.23
GFRA3-201ENST00000274721 IGKV2-24A0A0C4DH68 120 aa13.58□□□□□ -0.24
GFRA3-201ENST00000274721 A0A1W2PNN7 141 aa13.57□□□□□ -0.24
GFRA3-201ENST00000274721 TGP01266 2768 aa13.56□□□□□ -0.24
GFRA3-201ENST00000274721 SDIM1Q6ZPB5 146 aa13.56□□□□□ -0.24
GFRA3-201ENST00000274721 WWC2-AS2Q96NR7 200 aa13.56□□□□□ -0.24
GFRA3-201ENST00000274721 MT-ATP8P03928 68 aa13.55□□□□□ -0.24
GFRA3-201ENST00000274721 A0A087WTM6 91 aa13.54□□□□□ -0.24
GFRA3-201ENST00000274721 PKIGQ9Y2B9 76 aa13.54□□□□□ -0.24
GFRA3-201ENST00000274721 B5MCH6 92 aa13.53□□□□□ -0.24
GFRA3-201ENST00000274721 GHRHP01286 108 aa13.53□□□□□ -0.24
GFRA3-201ENST00000274721 Q6ZRX8 168 aa13.53□□□□□ -0.24
GFRA3-201ENST00000274721 GAGE2AQ6NT46 116 aa13.52□□□□□ -0.25
GFRA3-201ENST00000274721 CHTF8P0CG12 524 aa13.51□□□□□ -0.25
GFRA3-201ENST00000274721 A0A1B0GV72 72 aa13.5□□□□□ -0.25
GFRA3-201ENST00000274721 DHRS4-AS1Q9P1J3 65 aa13.49□□□□□ -0.25
GFRA3-201ENST00000274721 ETDCA0A1B0GVM5 59 aa13.49□□□□□ -0.25
GFRA3-201ENST00000274721 Q9BRP9 147 aa13.49□□□□□ -0.25
GFRA3-201ENST00000274721 LAMTOR3Q9UHA4 124 aa13.49□□□□□ -0.25
GFRA3-201ENST00000274721 LY6G6CO95867 125 aa13.48□□□□□ -0.25
GFRA3-201ENST00000274721 RBM3P98179 157 aaKnown RBP13.48□□□□□ -0.25
GFRA3-201ENST00000274721 REG3GQ6UW15 175 aa13.48□□□□□ -0.25
GFRA3-201ENST00000274721 CCKP06307 115 aa13.47□□□□□ -0.25
GFRA3-201ENST00000274721 LINC00474Q9P2X8 69 aa13.47□□□□□ -0.25
GFRA3-201ENST00000274721 LINC00476Q8WZB0 136 aa13.47□□□□□ -0.25
GFRA3-201ENST00000274721 C1orf134Q5TEV5 83 aa13.46□□□□□ -0.25
GFRA3-201ENST00000274721 DNAH2Q9P225 4427 aa13.46□□□□□ -0.25
GFRA3-201ENST00000274721 PCP4P48539 62 aa13.46□□□□□ -0.26
GFRA3-201ENST00000274721 SMCR5Q8TEV8 140 aa13.45□□□□□ -0.26
GFRA3-201ENST00000274721 SCGB1A1P11684 91 aa13.44□□□□□ -0.26
GFRA3-201ENST00000274721 LOC110117498A0A087WWA1 95 aa13.43□□□□□ -0.26
GFRA3-201ENST00000274721 PANO1I0J062 215 aa13.43□□□□□ -0.26
GFRA3-201ENST00000274721 NDUFV3P56181 108 aaKnown RBP13.42□□□□□ -0.26
GFRA3-201ENST00000274721 DNAH6Q9C0G6 4158 aa13.42□□□□□ -0.26
GFRA3-201ENST00000274721 LINC01547P58512 204 aaPredicted RBP13.42□□□□□ -0.26
GFRA3-201ENST00000274721 Q6ZQT0 140 aa13.41□□□□□ -0.26
GFRA3-201ENST00000274721 PHF5AQ7RTV0 110 aaKnown RBP13.41□□□□□ -0.26
GFRA3-201ENST00000274721 EPM2AB3EWF7 344 aa13.4□□□□□ -0.26
GFRA3-201ENST00000274721 Q8N377 158 aa13.4□□□□□ -0.26
GFRA3-201ENST00000274721 LINC00846Q9NV44 126 aa13.4□□□□□ -0.26
GFRA3-201ENST00000274721 C3orf84H3BNL1 204 aa13.39□□□□□ -0.27
GFRA3-201ENST00000274721 LINC00643Q86TS7 51 aa13.39□□□□□ -0.27
GFRA3-201ENST00000274721 KRTAP11-1Q8IUC1 163 aa13.39□□□□□ -0.27
GFRA3-201ENST00000274721 SPACA4Q8TDM5 124 aa13.39□□□□□ -0.27
GFRA3-201ENST00000274721 DSCR8Q96T75 97 aa13.39□□□□□ -0.27
GFRA3-201ENST00000274721 RTL8CO15255 209 aa13.38□□□□□ -0.27
GFRA3-201ENST00000274721 PDE6GP18545 87 aa13.38□□□□□ -0.27
GFRA3-201ENST00000274721 HECTD4Q9Y4D8 3996 aa13.38□□□□□ -0.27
GFRA3-201ENST00000274721 TRBV7-4A0A0J9YYF1 115 aa13.37□□□□□ -0.27
GFRA3-201ENST00000274721 ERC2-IT1O76042 136 aa13.37□□□□□ -0.27
GFRA3-201ENST00000274721 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.37□□□□□ -0.27
GFRA3-201ENST00000274721 IGLV5-48A0A075B6I7 105 aa13.36□□□□□ -0.27
GFRA3-201ENST00000274721 UBE2BP63146 152 aa13.35□□□□□ -0.27
GFRA3-201ENST00000274721 FUSP35637 526 aaKnown RBP eCLIP13.35□□□□□ -0.27
GFRA3-201ENST00000274721 DEFB105AQ8NG35 78 aa13.35□□□□□ -0.27
GFRA3-201ENST00000274721 DNAH17Q9UFH2 4485 aa13.34□□□□□ -0.27
GFRA3-201ENST00000274721 Q6Q795 121 aa13.34□□□□□ -0.27
GFRA3-201ENST00000274721 FAM19A1Q7Z5A9 133 aa13.34□□□□□ -0.27
GFRA3-201ENST00000274721 ST20-AS1Q8NBB2 130 aa13.34□□□□□ -0.27
GFRA3-201ENST00000274721 ALMS1Q8TCU4 4167 aa13.32□□□□□ -0.28
GFRA3-201ENST00000274721 TRBV7-7A0A0K0K1E9 115 aa13.32□□□□□ -0.28
GFRA3-201ENST00000274721 DPH3Q96FX2 82 aa13.32□□□□□ -0.28
GFRA3-201ENST00000274721 PRLHP81277 87 aa13.31□□□□□ -0.28
GFRA3-201ENST00000274721 H0Y9J4 135 aa13.3□□□□□ -0.28
GFRA3-201ENST00000274721 TNP2Q05952 138 aa13.3□□□□□ -0.28
GFRA3-201ENST00000274721 IGLV5-52A0A0A0MRZ9 124 aa13.29□□□□□ -0.28
GFRA3-201ENST00000274721 IMUPQ9GZP8 106 aa13.27□□□□□ -0.28
GFRA3-201ENST00000274721 C21orf62-AS1Q17RA5 79 aa13.25□□□□□ -0.29
GFRA3-201ENST00000274721 C3orf22Q8N5N4 141 aa13.25□□□□□ -0.29
GFRA3-201ENST00000274721 Q6JHZ5 121 aa13.24□□□□□ -0.29
GFRA3-201ENST00000274721 HIGD2AQ9BW72 106 aa13.23□□□□□ -0.29
GFRA3-201ENST00000274721 PLAC8Q9NZF1 115 aa13.23□□□□□ -0.29
GFRA3-201ENST00000274721 BCE1O60756 84 aa13.22□□□□□ -0.29
GFRA3-201ENST00000274721 SMIM29Q86T20 159 aa13.22□□□□□ -0.29
GFRA3-201ENST00000274721 FRAS1Q86XX4 4008 aa13.21□□□□□ -0.29
GFRA3-201ENST00000274721 KRTAP13-1Q8IUC0 172 aa13.21□□□□□ -0.29
GFRA3-201ENST00000274721 UBL5Q9BZL1 73 aa13.21□□□□□ -0.29
GFRA3-201ENST00000274721 UBE2AP49459 152 aa13.18□□□□□ -0.3
GFRA3-201ENST00000274721 HYDINQ4G0P3 5121 aa13.18□□□□□ -0.3
GFRA3-201ENST00000274721 KRTAP10-2P60368 255 aa13.17□□□□□ -0.3
GFRA3-201ENST00000274721 IGKV3D-7A0A0C4DH55 119 aa13.16□□□□□ -0.3
GFRA3-201ENST00000274721 ATP5EP2Q5VTU8 51 aa13.15□□□□□ -0.3
GFRA3-201ENST00000274721 Q6ZVQ6 151 aa13.15□□□□□ -0.3
GFRA3-201ENST00000274721 SPRR1BP22528 89 aa13.14□□□□□ -0.31
GFRA3-201ENST00000274721 C1orf137Q5JT78 98 aa13.14□□□□□ -0.31
GFRA3-201ENST00000274721 DNAH11Q96DT5 4516 aa13.13□□□□□ -0.31
GFRA3-201ENST00000274721 A0A1W2PNM2 257 aa13.11□□□□□ -0.31
GFRA3-201ENST00000274721 SRRM2Q9UQ35 2752 aaKnown RBP13.1□□□□□ -0.31
GFRA3-201ENST00000274721 DNAH5Q8TE73 4624 aa13.1□□□□□ -0.31
GFRA3-201ENST00000274721 FAT2Q9NYQ8 4349 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms