RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 C16orf90A8MZG2 172 aa10.63□□□□□ -0.71
CCDC40-201ENST00000269318 FAM19A5Q7Z5A7 132 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-201ENST00000269318 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-201ENST00000269318 SCGB1A1P11684 91 aa10.63□□□□□ -0.71
CCDC40-201ENST00000269318 GAGE2AQ6NT46 116 aa10.63□□□□□ -0.71
CCDC40-201ENST00000269318 A0A1B0GV72 72 aa10.62□□□□□ -0.71
CCDC40-201ENST00000269318 RPL37AP8A6NKH3 93 aa10.62□□□□□ -0.71
CCDC40-201ENST00000269318 SDIM1Q6ZPB5 146 aa10.62□□□□□ -0.71
CCDC40-201ENST00000269318 MRPL55Q7Z7F7 128 aaKnown RBP10.62□□□□□ -0.71
CCDC40-201ENST00000269318 KRTAP4-16G5E9R7 235 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-201ENST00000269318 H3BQ85 93 aa10.61□□□□□ -0.71
CCDC40-201ENST00000269318 PRYO14603 147 aa10.61□□□□□ -0.71
CCDC40-201ENST00000269318 SPRR1AP35321 89 aa10.61□□□□□ -0.71
CCDC40-201ENST00000269318 M0R2N4 97 aa10.59□□□□□ -0.71
CCDC40-201ENST00000269318 SMCR5Q8TEV8 140 aa10.59□□□□□ -0.71
CCDC40-201ENST00000269318 IGKV2-24A0A0C4DH68 120 aa10.58□□□□□ -0.72
CCDC40-201ENST00000269318 C9orf163Q8N9P6 203 aa10.57□□□□□ -0.72
CCDC40-201ENST00000269318 A0A1W2PNN7 141 aa10.57□□□□□ -0.72
CCDC40-201ENST00000269318 B5MCH6 92 aa10.57□□□□□ -0.72
CCDC40-201ENST00000269318 CCKP06307 115 aa10.57□□□□□ -0.72
CCDC40-201ENST00000269318 Q6ZR54 194 aa10.56□□□□□ -0.72
CCDC40-201ENST00000269318 Q6ZRX8 168 aa10.56□□□□□ -0.72
CCDC40-201ENST00000269318 GHRHP01286 108 aa10.56□□□□□ -0.72
CCDC40-201ENST00000269318 LAMTOR3Q9UHA4 124 aa10.56□□□□□ -0.72
CCDC40-201ENST00000269318 RBM3P98179 157 aaKnown RBP10.55□□□□□ -0.72
CCDC40-201ENST00000269318 C21orf62-AS1Q17RA5 79 aa10.55□□□□□ -0.72
CCDC40-201ENST00000269318 Q9BRP9 147 aa10.54□□□□□ -0.72
CCDC40-201ENST00000269318 LOC110117498A0A087WWA1 95 aa10.53□□□□□ -0.72
CCDC40-201ENST00000269318 CHTF8P0CG12 524 aa10.53□□□□□ -0.72
CCDC40-201ENST00000269318 LINC00643Q86TS7 51 aa10.53□□□□□ -0.72
CCDC40-201ENST00000269318 KMT2AQ03164 3969 aa10.53□□□□□ -0.72
CCDC40-201ENST00000269318 ETDCA0A1B0GVM5 59 aa10.52□□□□□ -0.72
CCDC40-201ENST00000269318 LINC00846Q9NV44 126 aa10.52□□□□□ -0.72
CCDC40-201ENST00000269318 DHRS4-AS1Q9P1J3 65 aa10.52□□□□□ -0.72
CCDC40-201ENST00000269318 Q6ZQT0 140 aa10.52□□□□□ -0.73
CCDC40-201ENST00000269318 A0A087WTM6 91 aa10.51□□□□□ -0.73
CCDC40-201ENST00000269318 Q6Q795 121 aa10.51□□□□□ -0.73
CCDC40-201ENST00000269318 REG3GQ6UW15 175 aa10.51□□□□□ -0.73
CCDC40-201ENST00000269318 PKIGQ9Y2B9 76 aa10.51□□□□□ -0.73
CCDC40-201ENST00000269318 TRBV7-7A0A0K0K1E9 115 aa10.5□□□□□ -0.73
CCDC40-201ENST00000269318 NDUFV3P56181 108 aaKnown RBP10.5□□□□□ -0.73
CCDC40-201ENST00000269318 DNAH2Q9P225 4427 aa10.49□□□□□ -0.73
CCDC40-201ENST00000269318 LINC01547P58512 204 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-201ENST00000269318 DSCR8Q96T75 97 aa10.48□□□□□ -0.73
CCDC40-201ENST00000269318 TRBV7-4A0A0J9YYF1 115 aa10.47□□□□□ -0.73
CCDC40-201ENST00000269318 Q8N377 158 aa10.47□□□□□ -0.73
CCDC40-201ENST00000269318 PANO1I0J062 215 aa10.46□□□□□ -0.74
CCDC40-201ENST00000269318 PDE6GP18545 87 aa10.46□□□□□ -0.74
CCDC40-201ENST00000269318 LINC00474Q9P2X8 69 aa10.46□□□□□ -0.74
CCDC40-201ENST00000269318 PHF5AQ7RTV0 110 aaKnown RBP10.45□□□□□ -0.74
CCDC40-201ENST00000269318 ERC2-IT1O76042 136 aa10.45□□□□□ -0.74
CCDC40-201ENST00000269318 WWC2-AS2Q96NR7 200 aa10.45□□□□□ -0.74
CCDC40-201ENST00000269318 IGLV5-48A0A075B6I7 105 aa10.44□□□□□ -0.74
CCDC40-201ENST00000269318 KRTAP11-1Q8IUC1 163 aa10.44□□□□□ -0.74
CCDC40-201ENST00000269318 DEFB105AQ8NG35 78 aa10.44□□□□□ -0.74
CCDC40-201ENST00000269318 IMUPQ9GZP8 106 aa10.44□□□□□ -0.74
CCDC40-201ENST00000269318 ST20-AS1Q8NBB2 130 aa10.43□□□□□ -0.74
CCDC40-201ENST00000269318 LY6G6CO95867 125 aa10.43□□□□□ -0.74
CCDC40-201ENST00000269318 UBE2BP63146 152 aa10.43□□□□□ -0.74
CCDC40-201ENST00000269318 HECTD4Q9Y4D8 3996 aa10.43□□□□□ -0.74
CCDC40-201ENST00000269318 DNAH6Q9C0G6 4158 aa10.42□□□□□ -0.74
CCDC40-201ENST00000269318 C1orf134Q5TEV5 83 aa10.41□□□□□ -0.74
CCDC40-201ENST00000269318 Q6JHZ5 121 aa10.41□□□□□ -0.74
CCDC40-201ENST00000269318 SPACA4Q8TDM5 124 aa10.41□□□□□ -0.74
CCDC40-201ENST00000269318 LINC00476Q8WZB0 136 aa10.41□□□□□ -0.74
CCDC40-201ENST00000269318 TGP01266 2768 aa10.41□□□□□ -0.74
CCDC40-201ENST00000269318 EPM2AB3EWF7 344 aa10.41□□□□□ -0.74
CCDC40-201ENST00000269318 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-201ENST00000269318 DNAH17Q9UFH2 4485 aa10.4□□□□□ -0.75
CCDC40-201ENST00000269318 FAM19A1Q7Z5A9 133 aa10.39□□□□□ -0.75
CCDC40-201ENST00000269318 RTL8CO15255 209 aa10.39□□□□□ -0.75
CCDC40-201ENST00000269318 FUSP35637 526 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCDC40-201ENST00000269318 PRLHP81277 87 aa10.39□□□□□ -0.75
CCDC40-201ENST00000269318 C3orf22Q8N5N4 141 aa10.37□□□□□ -0.75
CCDC40-201ENST00000269318 TNP2Q05952 138 aa10.37□□□□□ -0.75
CCDC40-201ENST00000269318 UBL5Q9BZL1 73 aa10.36□□□□□ -0.75
CCDC40-201ENST00000269318 ALMS1Q8TCU4 4167 aa10.36□□□□□ -0.75
CCDC40-201ENST00000269318 IGKV3D-7A0A0C4DH55 119 aa10.35□□□□□ -0.75
CCDC40-201ENST00000269318 H0Y9J4 135 aa10.35□□□□□ -0.75
CCDC40-201ENST00000269318 DPH3Q96FX2 82 aa10.34□□□□□ -0.75
CCDC40-201ENST00000269318 SMIM29Q86T20 159 aa10.33□□□□□ -0.76
CCDC40-201ENST00000269318 ATP5EP2Q5VTU8 51 aa10.32□□□□□ -0.76
CCDC40-201ENST00000269318 HIGD2AQ9BW72 106 aa10.32□□□□□ -0.76
CCDC40-201ENST00000269318 Q6ZVQ6 151 aa10.32□□□□□ -0.76
CCDC40-201ENST00000269318 IGLV5-52A0A0A0MRZ9 124 aa10.31□□□□□ -0.76
CCDC40-201ENST00000269318 C3orf84H3BNL1 204 aa10.31□□□□□ -0.76
CCDC40-201ENST00000269318 ANAPC13Q9BS18 74 aa10.3□□□□□ -0.76
CCDC40-201ENST00000269318 FAM236AA0A1B0GUQ0 79 aa10.3□□□□□ -0.76
CCDC40-201ENST00000269318 FAM236BA0A1B0GV22 79 aa10.3□□□□□ -0.76
CCDC40-201ENST00000269318 BCE1O60756 84 aa10.3□□□□□ -0.76
CCDC40-201ENST00000269318 KRTAP13-1Q8IUC0 172 aa10.29□□□□□ -0.76
CCDC40-201ENST00000269318 FRAS1Q86XX4 4008 aa10.29□□□□□ -0.76
CCDC40-201ENST00000269318 PLAC8Q9NZF1 115 aa10.28□□□□□ -0.76
CCDC40-201ENST00000269318 UBE2AP49459 152 aa10.27□□□□□ -0.77
CCDC40-201ENST00000269318 C1orf137Q5JT78 98 aa10.27□□□□□ -0.77
CCDC40-201ENST00000269318 A0A1W2PNM2 257 aa10.26□□□□□ -0.77
CCDC40-201ENST00000269318 HIST1H4AP62805 103 aaKnown RBP10.26□□□□□ -0.77
CCDC40-201ENST00000269318 A0A087WVE0 104 aa10.25□□□□□ -0.77
CCDC40-201ENST00000269318 SPRR1BP22528 89 aa10.25□□□□□ -0.77
CCDC40-201ENST00000269318 DNAH11Q96DT5 4516 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms