RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 LINC00575Q6W349 94 aa12.14□□□□□ -0.47
TRIM47-201ENST00000254816 DNAH6Q9C0G6 4158 aa12.14□□□□□ -0.47
TRIM47-201ENST00000254816 ALMS1Q8TCU4 4167 aa12.14□□□□□ -0.47
TRIM47-201ENST00000254816 A0A096LNI7 61 aa12.12□□□□□ -0.47
TRIM47-201ENST00000254816 KRTAP7-1Q8IUC3 87 aa12.12□□□□□ -0.47
TRIM47-201ENST00000254816 NKAPP1Q8N9T2 125 aa12.12□□□□□ -0.47
TRIM47-201ENST00000254816 LINC00846Q9NV44 126 aa12.12□□□□□ -0.47
TRIM47-201ENST00000254816 TRAV23DV6A0A075B6W5 121 aa12.11□□□□□ -0.47
TRIM47-201ENST00000254816 IGKV2-24A0A0C4DH68 120 aa12.11□□□□□ -0.47
TRIM47-201ENST00000254816 TMEM256-PLSCR3K7ERE1 68 aa12.11□□□□□ -0.47
TRIM47-201ENST00000254816 FAM236AA0A1B0GUQ0 79 aa12.1□□□□□ -0.47
TRIM47-201ENST00000254816 FAM236BA0A1B0GV22 79 aa12.1□□□□□ -0.47
TRIM47-201ENST00000254816 FAM19A5Q7Z5A7 132 aaPredicted RBP12.1□□□□□ -0.47
TRIM47-201ENST00000254816 HYDINQ4G0P3 5121 aa12.1□□□□□ -0.47
TRIM47-201ENST00000254816 hADV29S1A0JD25 119 aa12.09□□□□□ -0.47
TRIM47-201ENST00000254816 C3orf84H3BNL1 204 aa12.09□□□□□ -0.47
TRIM47-201ENST00000254816 C7orf33Q8WU49 177 aa12.09□□□□□ -0.47
TRIM47-201ENST00000254816 PLA2G2DQ9UNK4 145 aa12.09□□□□□ -0.47
TRIM47-201ENST00000254816 A0A087WTM6 91 aa12.09□□□□□ -0.47
TRIM47-201ENST00000254816 FUSP35637 526 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRIM47-201ENST00000254816 CCDC179H3BU77 68 aa12.08□□□□□ -0.48
TRIM47-201ENST00000254816 C1orf134Q5TEV5 83 aa12.08□□□□□ -0.48
TRIM47-201ENST00000254816 IMUPQ9GZP8 106 aa12.08□□□□□ -0.48
TRIM47-201ENST00000254816 C16orf90A8MZG2 172 aa12.07□□□□□ -0.48
TRIM47-201ENST00000254816 HECTD4Q9Y4D8 3996 aa12.07□□□□□ -0.48
TRIM47-201ENST00000254816 CCKP06307 115 aa12.07□□□□□ -0.48
TRIM47-201ENST00000254816 C9orf163Q8N9P6 203 aa12.07□□□□□ -0.48
TRIM47-201ENST00000254816 JMJD7-PLA2G4BH0Y9G9 81 aa12.06□□□□□ -0.48
TRIM47-201ENST00000254816 ZNF73O43830 326 aaPredicted RBP12.06□□□□□ -0.48
TRIM47-201ENST00000254816 CHTF8P0CG12 524 aa12.06□□□□□ -0.48
TRIM47-201ENST00000254816 RPL37AP8A6NKH3 93 aa12.06□□□□□ -0.48
TRIM47-201ENST00000254816 DIRC1Q969H9 104 aa12.06□□□□□ -0.48
TRIM47-201ENST00000254816 IGKV3D-7A0A0C4DH55 119 aa12.05□□□□□ -0.48
TRIM47-201ENST00000254816 DNAH17Q9UFH2 4485 aa12.05□□□□□ -0.48
TRIM47-201ENST00000254816 Q6ZQY7 126 aa12.04□□□□□ -0.48
TRIM47-201ENST00000254816 IGLV5-37A0A075B6J1 123 aa12.04□□□□□ -0.48
TRIM47-201ENST00000254816 FRAS1Q86XX4 4008 aa12.03□□□□□ -0.48
TRIM47-201ENST00000254816 A0A1W2PNN7 141 aa12.03□□□□□ -0.48
TRIM47-201ENST00000254816 B5MCH6 92 aa12.02□□□□□ -0.49
TRIM47-201ENST00000254816 MRPL55Q7Z7F7 128 aaKnown RBP12.01□□□□□ -0.49
TRIM47-201ENST00000254816 LAMTOR3Q9UHA4 124 aa12.01□□□□□ -0.49
TRIM47-201ENST00000254816 COX7BP24311 80 aa12□□□□□ -0.49
TRIM47-201ENST00000254816 IGLV1-50A0A075B6I6 118 aa11.99□□□□□ -0.49
TRIM47-201ENST00000254816 KCNQ1DNQ9H478 68 aa11.99□□□□□ -0.49
TRIM47-201ENST00000254816 Q6JHZ5 121 aa11.99□□□□□ -0.49
TRIM47-201ENST00000254816 PANO1I0J062 215 aa11.98□□□□□ -0.49
TRIM47-201ENST00000254816 ELOF1P60002 83 aaKnown RBP11.98□□□□□ -0.49
TRIM47-201ENST00000254816 RBM3P98179 157 aaKnown RBP11.97□□□□□ -0.49
TRIM47-201ENST00000254816 TNP2Q05952 138 aa11.97□□□□□ -0.49
TRIM47-201ENST00000254816 RTL8CO15255 209 aa11.97□□□□□ -0.49
TRIM47-201ENST00000254816 A0A087WVE0 104 aa11.95□□□□□ -0.5
TRIM47-201ENST00000254816 Q6ZQT0 140 aa11.95□□□□□ -0.5
TRIM47-201ENST00000254816 TRBV7-6A0A0J9YX20 115 aa11.94□□□□□ -0.5
TRIM47-201ENST00000254816 LINC00528Q8N1L1 170 aa11.93□□□□□ -0.5
TRIM47-201ENST00000254816 SS18L2Q9UHA2 77 aa11.93□□□□□ -0.5
TRIM47-201ENST00000254816 PRYO14603 147 aa11.93□□□□□ -0.5
TRIM47-201ENST00000254816 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.93□□□□□ -0.5
TRIM47-201ENST00000254816 PHF5AQ7RTV0 110 aaKnown RBP11.92□□□□□ -0.5
TRIM47-201ENST00000254816 SACSQ9NZJ4 4579 aa11.92□□□□□ -0.5
TRIM47-201ENST00000254816 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.91□□□□□ -0.5
TRIM47-201ENST00000254816 DPH3Q96FX2 82 aa11.91□□□□□ -0.5
TRIM47-201ENST00000254816 PKIGQ9Y2B9 76 aa11.91□□□□□ -0.5
TRIM47-201ENST00000254816 DNAH11Q96DT5 4516 aa11.91□□□□□ -0.5
TRIM47-201ENST00000254816 LOC110117498A0A087WWA1 95 aa11.9□□□□□ -0.5
TRIM47-201ENST00000254816 IGLV5-52A0A0A0MRZ9 124 aa11.9□□□□□ -0.5
TRIM47-201ENST00000254816 HIST1H4AP62805 103 aaKnown RBP11.9□□□□□ -0.5
TRIM47-201ENST00000254816 DSCR8Q96T75 97 aa11.9□□□□□ -0.5
TRIM47-201ENST00000254816 KRTAP4-16G5E9R7 235 aaPredicted RBP11.89□□□□□ -0.51
TRIM47-201ENST00000254816 SPRR1AP35321 89 aa11.89□□□□□ -0.51
TRIM47-201ENST00000254816 LINC00474Q9P2X8 69 aa11.89□□□□□ -0.51
TRIM47-201ENST00000254816 KRTAP11-1Q8IUC1 163 aa11.88□□□□□ -0.51
TRIM47-201ENST00000254816 FAT2Q9NYQ8 4349 aa11.88□□□□□ -0.51
TRIM47-201ENST00000254816 ETDCA0A1B0GVM5 59 aa11.88□□□□□ -0.51
TRIM47-201ENST00000254816 REG3GQ6UW15 175 aa11.88□□□□□ -0.51
TRIM47-201ENST00000254816 SPACA4Q8TDM5 124 aa11.88□□□□□ -0.51
TRIM47-201ENST00000254816 UBL5Q9BZL1 73 aa11.87□□□□□ -0.51
TRIM47-201ENST00000254816 DNAH5Q8TE73 4624 aa11.86□□□□□ -0.51
TRIM47-201ENST00000254816 H3BQ85 93 aa11.85□□□□□ -0.51
TRIM47-201ENST00000254816 UBE2BP63146 152 aa11.85□□□□□ -0.51
TRIM47-201ENST00000254816 Q6ZRX8 168 aa11.85□□□□□ -0.51
TRIM47-201ENST00000254816 KRTAP10-2P60368 255 aa11.85□□□□□ -0.51
TRIM47-201ENST00000254816 PKD1P98161 4303 aa11.84□□□□□ -0.51
TRIM47-201ENST00000254816 Q9BRP9 147 aa11.84□□□□□ -0.51
TRIM47-201ENST00000254816 FAM19A1Q7Z5A9 133 aa11.83□□□□□ -0.52
TRIM47-201ENST00000254816 ATOX1O00244 68 aa11.83□□□□□ -0.52
TRIM47-201ENST00000254816 C3orf22Q8N5N4 141 aa11.83□□□□□ -0.52
TRIM47-201ENST00000254816 DNAH8Q96JB1 4490 aa11.82□□□□□ -0.52
TRIM47-201ENST00000254816 ATP5EP2Q5VTU8 51 aa11.82□□□□□ -0.52
TRIM47-201ENST00000254816 TRBV7-4A0A0J9YYF1 115 aa11.81□□□□□ -0.52
TRIM47-201ENST00000254816 C9orf153Q5TBE3 101 aa11.8□□□□□ -0.52
TRIM47-201ENST00000254816 UQCRQO14949 82 aa11.79□□□□□ -0.52
TRIM47-201ENST00000254816 GHRHP01286 108 aa11.79□□□□□ -0.52
TRIM47-201ENST00000254816 PDE6GP18545 87 aa11.79□□□□□ -0.52
TRIM47-201ENST00000254816 PRLHP81277 87 aa11.79□□□□□ -0.52
TRIM47-201ENST00000254816 Q6ZVQ6 151 aa11.79□□□□□ -0.52
TRIM47-201ENST00000254816 DEFB105AQ8NG35 78 aa11.79□□□□□ -0.52
TRIM47-201ENST00000254816 COX7CP15954 63 aa11.78□□□□□ -0.52
TRIM47-201ENST00000254816 DHRS4-AS1Q9P1J3 65 aa11.78□□□□□ -0.52
TRIM47-201ENST00000254816 ERC2-IT1O76042 136 aa11.77□□□□□ -0.52
TRIM47-201ENST00000254816 LCE6AA0A183 80 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms