RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SERP1Q9Y6X1 66 aa13.71□□□□□ -0.22
SNX3-201ENST00000230085 Q6ZQY7 126 aa13.7□□□□□ -0.22
SNX3-201ENST00000230085 DIRC1Q969H9 104 aa13.7□□□□□ -0.22
SNX3-201ENST00000230085 Q6ZTC4 211 aa13.68□□□□□ -0.22
SNX3-201ENST00000230085 IGLV10-54A0A075B6I4 117 aa13.68□□□□□ -0.22
SNX3-201ENST00000230085 NDUFC1O43677 76 aa13.68□□□□□ -0.22
SNX3-201ENST00000230085 DAD1P61803 113 aa13.68□□□□□ -0.22
SNX3-201ENST00000230085 ELOF1P60002 83 aaKnown RBP13.67□□□□□ -0.22
SNX3-201ENST00000230085 A0A096LPF7 62 aa13.66□□□□□ -0.22
SNX3-201ENST00000230085 M0R2N4 97 aa13.66□□□□□ -0.22
SNX3-201ENST00000230085 ERC2-IT1O76042 136 aa13.65□□□□□ -0.22
SNX3-201ENST00000230085 Q8N3U1 123 aa13.64□□□□□ -0.23
SNX3-201ENST00000230085 STARD9Q9P2P6 4700 aa13.63□□□□□ -0.23
SNX3-201ENST00000230085 ATP5EP56381 51 aaPredicted RBP13.63□□□□□ -0.23
SNX3-201ENST00000230085 ZNF73O43830 326 aaPredicted RBP13.63□□□□□ -0.23
SNX3-201ENST00000230085 COX7BP24311 80 aa13.63□□□□□ -0.23
SNX3-201ENST00000230085 HAMPP81172 84 aa13.62□□□□□ -0.23
SNX3-201ENST00000230085 C6orf48Q9UBA6 75 aa13.62□□□□□ -0.23
SNX3-201ENST00000230085 HTN3P15516 51 aa13.61□□□□□ -0.23
SNX3-201ENST00000230085 DEFB131BA0A096LNP1 70 aa13.6□□□□□ -0.23
SNX3-201ENST00000230085 TRAV10A0A0B4J240 114 aa13.59□□□□□ -0.23
SNX3-201ENST00000230085 VPREB1P12018 145 aa13.58□□□□□ -0.23
SNX3-201ENST00000230085 F8WDY8 70 aa13.57□□□□□ -0.24
SNX3-201ENST00000230085 C4orf26Q17RF5 130 aa13.57□□□□□ -0.24
SNX3-201ENST00000230085 M0R378 163 aa13.56□□□□□ -0.24
SNX3-201ENST00000230085 CASC10Q5T4H9 136 aa13.56□□□□□ -0.24
SNX3-201ENST00000230085 C3orf84H3BNL1 204 aa13.55□□□□□ -0.24
SNX3-201ENST00000230085 LINC00528Q8N1L1 170 aa13.55□□□□□ -0.24
SNX3-201ENST00000230085 NUPR2A6NF83 97 aa13.55□□□□□ -0.24
SNX3-201ENST00000230085 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
SNX3-201ENST00000230085 KLK12Q9UKR0 248 aa13.53□□□□□ -0.24
SNX3-201ENST00000230085 A0A1B0GW54 56 aa13.53□□□□□ -0.24
SNX3-201ENST00000230085 TENM2Q9NT68 2774 aa13.52□□□□□ -0.24
SNX3-201ENST00000230085 PLECQ15149 4684 aaKnown RBP13.52□□□□□ -0.24
SNX3-201ENST00000230085 H3BNG1 76 aa13.52□□□□□ -0.25
SNX3-201ENST00000230085 SMIM26A0A096LP01 95 aa13.51□□□□□ -0.25
SNX3-201ENST00000230085 LYSTQ99698 3801 aa13.51□□□□□ -0.25
SNX3-201ENST00000230085 KRTAP26-1Q6PEX3 210 aa13.5□□□□□ -0.25
SNX3-201ENST00000230085 HRCT1Q6UXD1 115 aa13.5□□□□□ -0.25
SNX3-201ENST00000230085 XAGE1AQ9HD64 81 aa13.48□□□□□ -0.25
SNX3-201ENST00000230085 F8WEM9 126 aa13.47□□□□□ -0.25
SNX3-201ENST00000230085 NREPQ16612 68 aa13.47□□□□□ -0.25
SNX3-201ENST00000230085 RMI2Q96E14 147 aa13.47□□□□□ -0.25
SNX3-201ENST00000230085 BPY2O14599 106 aa13.45□□□□□ -0.26
SNX3-201ENST00000230085 APLNQ9ULZ1 77 aa13.45□□□□□ -0.26
SNX3-201ENST00000230085 CAMK2N2Q96S95 79 aa13.44□□□□□ -0.26
SNX3-201ENST00000230085 IGKV4-1P06312 121 aa13.43□□□□□ -0.26
SNX3-201ENST00000230085 OCR1Q9BZK8 76 aa13.43□□□□□ -0.26
SNX3-201ENST00000230085 SNURFQ9Y675 71 aa13.43□□□□□ -0.26
SNX3-201ENST00000230085 TMEM254Q8TBM7 123 aa13.43□□□□□ -0.26
SNX3-201ENST00000230085 IGLV5-48A0A075B6I7 105 aa13.41□□□□□ -0.26
SNX3-201ENST00000230085 KCNQ1DNQ9H478 68 aa13.4□□□□□ -0.26
SNX3-201ENST00000230085 C15orf56Q8N910 161 aa13.4□□□□□ -0.26
SNX3-201ENST00000230085 FP248Q71RG6 208 aaPredicted RBP13.39□□□□□ -0.27
SNX3-201ENST00000230085 A0A0U1RQV1 116 aa13.38□□□□□ -0.27
SNX3-201ENST00000230085 Q6ZRU5 148 aa13.38□□□□□ -0.27
SNX3-201ENST00000230085 PRO0628Q9UI54 55 aa13.37□□□□□ -0.27
SNX3-201ENST00000230085 PLA2G2DQ9UNK4 145 aa13.37□□□□□ -0.27
SNX3-201ENST00000230085 SCXQ7RTU7 201 aa13.36□□□□□ -0.27
SNX3-201ENST00000230085 LCE6AA0A183 80 aa13.35□□□□□ -0.27
SNX3-201ENST00000230085 HIGD2BQ4VC39 106 aa13.35□□□□□ -0.27
SNX3-201ENST00000230085 TLX1NBP0CAT3 122 aa13.32□□□□□ -0.28
SNX3-201ENST00000230085 KMT2CQ8NEZ4 4911 aaKnown RBP13.32□□□□□ -0.28
SNX3-201ENST00000230085 PRYO14603 147 aa13.31□□□□□ -0.28
SNX3-201ENST00000230085 ESRGQ1W209 222 aa13.31□□□□□ -0.28
SNX3-201ENST00000230085 WFDC10BQ8IUB3 73 aa13.31□□□□□ -0.28
SNX3-201ENST00000230085 KMT2AQ03164 3969 aa13.3□□□□□ -0.28
SNX3-201ENST00000230085 Q6ZRP5 223 aa13.3□□□□□ -0.28
SNX3-201ENST00000230085 DHRS4-AS1Q9P1J3 65 aa13.3□□□□□ -0.28
SNX3-201ENST00000230085 IGLV5-37A0A075B6J1 123 aa13.3□□□□□ -0.28
SNX3-201ENST00000230085 LY6G6CO95867 125 aa13.3□□□□□ -0.28
SNX3-201ENST00000230085 Q8N377 158 aa13.3□□□□□ -0.28
SNX3-201ENST00000230085 TNP2Q05952 138 aa13.29□□□□□ -0.28
SNX3-201ENST00000230085 LINC00476Q8WZB0 136 aa13.29□□□□□ -0.28
SNX3-201ENST00000230085 LINC01556Q5JQF7 62 aa13.28□□□□□ -0.28
SNX3-201ENST00000230085 LINC00588Q9Y4M8 146 aa13.28□□□□□ -0.28
SNX3-201ENST00000230085 VPS13DQ5THJ4 4388 aa13.28□□□□□ -0.28
SNX3-201ENST00000230085 SACSQ9NZJ4 4579 aa13.27□□□□□ -0.28
SNX3-201ENST00000230085 LINC00336Q6ZUF6 198 aa13.27□□□□□ -0.29
SNX3-201ENST00000230085 DNAH1Q9P2D7 4330 aa13.26□□□□□ -0.29
SNX3-201ENST00000230085 KRTAP4-16G5E9R7 235 aaPredicted RBP13.26□□□□□ -0.29
SNX3-201ENST00000230085 SPRR1AP35321 89 aa13.26□□□□□ -0.29
SNX3-201ENST00000230085 SYCNQ0VAF6 134 aa13.26□□□□□ -0.29
SNX3-201ENST00000230085 UBE2DNLQ8IWF7 75 aa13.26□□□□□ -0.29
SNX3-201ENST00000230085 C1orf43Q9BWL3 253 aa13.26□□□□□ -0.29
SNX3-201ENST00000230085 ALMS1Q8TCU4 4167 aa13.26□□□□□ -0.29
SNX3-201ENST00000230085 FUSP35637 526 aaKnown RBP eCLIP13.25□□□□□ -0.29
SNX3-201ENST00000230085 HYDINQ4G0P3 5121 aa13.25□□□□□ -0.29
SNX3-201ENST00000230085 C7orf33Q8WU49 177 aa13.24□□□□□ -0.29
SNX3-201ENST00000230085 SPRR4Q96PI1 79 aa13.24□□□□□ -0.29
SNX3-201ENST00000230085 Q6ZRX8 168 aa13.23□□□□□ -0.29
SNX3-201ENST00000230085 NKAPP1Q8N9T2 125 aa13.23□□□□□ -0.29
SNX3-201ENST00000230085 Q8N9L7 120 aa13.22□□□□□ -0.29
SNX3-201ENST00000230085 Q8NBF4 154 aa13.2□□□□□ -0.3
SNX3-201ENST00000230085 A0A1W2PNM2 257 aa13.19□□□□□ -0.3
SNX3-201ENST00000230085 SERTAD4-AS1Q5TG53 156 aa13.17□□□□□ -0.3
SNX3-201ENST00000230085 ZCCHC13Q8WW36 166 aaKnown RBP13.17□□□□□ -0.3
SNX3-201ENST00000230085 IGLV1-50A0A075B6I6 118 aa13.16□□□□□ -0.3
SNX3-201ENST00000230085 LINC00474Q9P2X8 69 aa13.16□□□□□ -0.3
SNX3-201ENST00000230085 DNAH10OSP0CZ25 163 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms