RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 PRYO14603 147 aa11.85□□□□□ -0.51
CTSA-201ENST00000191018 RPL37AP8A6NKH3 93 aa11.85□□□□□ -0.51
CTSA-201ENST00000191018 SPRR1AP35321 89 aa11.85□□□□□ -0.51
CTSA-201ENST00000191018 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.85□□□□□ -0.51
CTSA-201ENST00000191018 KRTAP4-16G5E9R7 235 aaPredicted RBP11.84□□□□□ -0.51
CTSA-201ENST00000191018 H3BQ85 93 aa11.83□□□□□ -0.52
CTSA-201ENST00000191018 XGP55808 180 aa11.83□□□□□ -0.52
CTSA-201ENST00000191018 IGKV2-24A0A0C4DH68 120 aa11.83□□□□□ -0.52
CTSA-201ENST00000191018 JMJD7-PLA2G4BH0Y9G9 81 aa11.83□□□□□ -0.52
CTSA-201ENST00000191018 ACYP1P07311 99 aa11.83□□□□□ -0.52
CTSA-201ENST00000191018 C14orf132Q9NPU4 83 aa11.83□□□□□ -0.52
CTSA-201ENST00000191018 WWC2-AS2Q96NR7 200 aa11.82□□□□□ -0.52
CTSA-201ENST00000191018 A0A1W2PNN7 141 aa11.81□□□□□ -0.52
CTSA-201ENST00000191018 A0A087WTM6 91 aa11.8□□□□□ -0.52
CTSA-201ENST00000191018 PKIGQ9Y2B9 76 aa11.8□□□□□ -0.52
CTSA-201ENST00000191018 KMT2AQ03164 3969 aa11.79□□□□□ -0.52
CTSA-201ENST00000191018 SDIM1Q6ZPB5 146 aa11.79□□□□□ -0.52
CTSA-201ENST00000191018 Q6ZRX8 168 aa11.78□□□□□ -0.52
CTSA-201ENST00000191018 B5MCH6 92 aa11.78□□□□□ -0.52
CTSA-201ENST00000191018 GHRHP01286 108 aa11.78□□□□□ -0.52
CTSA-201ENST00000191018 MT-ATP8P03928 68 aa11.78□□□□□ -0.52
CTSA-201ENST00000191018 CHTF8P0CG12 524 aa11.76□□□□□ -0.53
CTSA-201ENST00000191018 GAGE2AQ6NT46 116 aa11.76□□□□□ -0.53
CTSA-201ENST00000191018 TGP01266 2768 aa11.76□□□□□ -0.53
CTSA-201ENST00000191018 A0A1B0GV72 72 aa11.76□□□□□ -0.53
CTSA-201ENST00000191018 DNAH2Q9P225 4427 aa11.75□□□□□ -0.53
CTSA-201ENST00000191018 ETDCA0A1B0GVM5 59 aa11.74□□□□□ -0.53
CTSA-201ENST00000191018 LY6G6CO95867 125 aa11.74□□□□□ -0.53
CTSA-201ENST00000191018 LINC00476Q8WZB0 136 aa11.74□□□□□ -0.53
CTSA-201ENST00000191018 Q9BRP9 147 aa11.74□□□□□ -0.53
CTSA-201ENST00000191018 DHRS4-AS1Q9P1J3 65 aa11.74□□□□□ -0.53
CTSA-201ENST00000191018 REG3GQ6UW15 175 aa11.74□□□□□ -0.53
CTSA-201ENST00000191018 LAMTOR3Q9UHA4 124 aa11.74□□□□□ -0.53
CTSA-201ENST00000191018 CCKP06307 115 aa11.73□□□□□ -0.53
CTSA-201ENST00000191018 LINC00474Q9P2X8 69 aa11.73□□□□□ -0.53
CTSA-201ENST00000191018 RBM3P98179 157 aaKnown RBP11.72□□□□□ -0.53
CTSA-201ENST00000191018 C1orf134Q5TEV5 83 aa11.72□□□□□ -0.53
CTSA-201ENST00000191018 DNAH6Q9C0G6 4158 aa11.71□□□□□ -0.53
CTSA-201ENST00000191018 SMCR5Q8TEV8 140 aa11.71□□□□□ -0.53
CTSA-201ENST00000191018 PANO1I0J062 215 aa11.7□□□□□ -0.54
CTSA-201ENST00000191018 SCGB1A1P11684 91 aa11.7□□□□□ -0.54
CTSA-201ENST00000191018 LOC110117498A0A087WWA1 95 aa11.69□□□□□ -0.54
CTSA-201ENST00000191018 PCP4P48539 62 aa11.69□□□□□ -0.54
CTSA-201ENST00000191018 NDUFV3P56181 108 aaKnown RBP11.68□□□□□ -0.54
CTSA-201ENST00000191018 LINC01547P58512 204 aaPredicted RBP11.68□□□□□ -0.54
CTSA-201ENST00000191018 Q6ZQT0 140 aa11.68□□□□□ -0.54
CTSA-201ENST00000191018 PHF5AQ7RTV0 110 aaKnown RBP11.68□□□□□ -0.54
CTSA-201ENST00000191018 C3orf84H3BNL1 204 aa11.67□□□□□ -0.54
CTSA-201ENST00000191018 DNAH17Q9UFH2 4485 aa11.66□□□□□ -0.54
CTSA-201ENST00000191018 EPM2AB3EWF7 344 aa11.66□□□□□ -0.54
CTSA-201ENST00000191018 SPACA4Q8TDM5 124 aa11.66□□□□□ -0.54
CTSA-201ENST00000191018 RTL8CO15255 209 aa11.66□□□□□ -0.54
CTSA-201ENST00000191018 KRTAP11-1Q8IUC1 163 aa11.66□□□□□ -0.54
CTSA-201ENST00000191018 Q8N377 158 aa11.66□□□□□ -0.54
CTSA-201ENST00000191018 LINC00846Q9NV44 126 aa11.66□□□□□ -0.54
CTSA-201ENST00000191018 HECTD4Q9Y4D8 3996 aa11.65□□□□□ -0.54
CTSA-201ENST00000191018 LINC00643Q86TS7 51 aa11.65□□□□□ -0.54
CTSA-201ENST00000191018 DSCR8Q96T75 97 aa11.65□□□□□ -0.54
CTSA-201ENST00000191018 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.65□□□□□ -0.54
CTSA-201ENST00000191018 ALMS1Q8TCU4 4167 aa11.65□□□□□ -0.54
CTSA-201ENST00000191018 TRBV7-4A0A0J9YYF1 115 aa11.64□□□□□ -0.55
CTSA-201ENST00000191018 IGLV5-48A0A075B6I7 105 aa11.63□□□□□ -0.55
CTSA-201ENST00000191018 ERC2-IT1O76042 136 aa11.63□□□□□ -0.55
CTSA-201ENST00000191018 PDE6GP18545 87 aa11.63□□□□□ -0.55
CTSA-201ENST00000191018 UBE2BP63146 152 aa11.63□□□□□ -0.55
CTSA-201ENST00000191018 FUSP35637 526 aaKnown RBP eCLIP11.62□□□□□ -0.55
CTSA-201ENST00000191018 FAM19A1Q7Z5A9 133 aa11.61□□□□□ -0.55
CTSA-201ENST00000191018 ST20-AS1Q8NBB2 130 aa11.61□□□□□ -0.55
CTSA-201ENST00000191018 DEFB105AQ8NG35 78 aa11.61□□□□□ -0.55
CTSA-201ENST00000191018 Q6Q795 121 aa11.6□□□□□ -0.55
CTSA-201ENST00000191018 TRBV7-7A0A0K0K1E9 115 aa11.59□□□□□ -0.55
CTSA-201ENST00000191018 PRLHP81277 87 aa11.59□□□□□ -0.55
CTSA-201ENST00000191018 TNP2Q05952 138 aa11.59□□□□□ -0.55
CTSA-201ENST00000191018 H0Y9J4 135 aa11.58□□□□□ -0.56
CTSA-201ENST00000191018 IGLV5-52A0A0A0MRZ9 124 aa11.57□□□□□ -0.56
CTSA-201ENST00000191018 DPH3Q96FX2 82 aa11.57□□□□□ -0.56
CTSA-201ENST00000191018 C21orf62-AS1Q17RA5 79 aa11.55□□□□□ -0.56
CTSA-201ENST00000191018 IMUPQ9GZP8 106 aa11.55□□□□□ -0.56
CTSA-201ENST00000191018 C3orf22Q8N5N4 141 aa11.54□□□□□ -0.56
CTSA-201ENST00000191018 FRAS1Q86XX4 4008 aa11.54□□□□□ -0.56
CTSA-201ENST00000191018 Q6JHZ5 121 aa11.53□□□□□ -0.56
CTSA-201ENST00000191018 PLAC8Q9NZF1 115 aa11.53□□□□□ -0.56
CTSA-201ENST00000191018 HIGD2AQ9BW72 106 aa11.52□□□□□ -0.57
CTSA-201ENST00000191018 BCE1O60756 84 aa11.51□□□□□ -0.57
CTSA-201ENST00000191018 SMIM29Q86T20 159 aa11.51□□□□□ -0.57
CTSA-201ENST00000191018 KRTAP13-1Q8IUC0 172 aa11.51□□□□□ -0.57
CTSA-201ENST00000191018 HYDINQ4G0P3 5121 aa11.51□□□□□ -0.57
CTSA-201ENST00000191018 UBL5Q9BZL1 73 aa11.49□□□□□ -0.57
CTSA-201ENST00000191018 UBE2AP49459 152 aa11.48□□□□□ -0.57
CTSA-201ENST00000191018 DNAH11Q96DT5 4516 aa11.47□□□□□ -0.57
CTSA-201ENST00000191018 KRTAP10-2P60368 255 aa11.46□□□□□ -0.57
CTSA-201ENST00000191018 IGKV3D-7A0A0C4DH55 119 aa11.45□□□□□ -0.58
CTSA-201ENST00000191018 SPRR1BP22528 89 aa11.44□□□□□ -0.58
CTSA-201ENST00000191018 ATP5EP2Q5VTU8 51 aa11.44□□□□□ -0.58
CTSA-201ENST00000191018 Q6ZVQ6 151 aa11.44□□□□□ -0.58
CTSA-201ENST00000191018 DNAH8Q96JB1 4490 aa11.44□□□□□ -0.58
CTSA-201ENST00000191018 C1orf137Q5JT78 98 aa11.44□□□□□ -0.58
CTSA-201ENST00000191018 DNAH5Q8TE73 4624 aa11.43□□□□□ -0.58
CTSA-201ENST00000191018 PSORS1C2Q9UIG4 136 aa11.41□□□□□ -0.58
CTSA-201ENST00000191018 FAT2Q9NYQ8 4349 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms