RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 XGP55808 180 aa9.15□□□□□ -0.94
RTFDC1-201ENST00000023939 Q6ZQY7 126 aa9.15□□□□□ -0.94
RTFDC1-201ENST00000023939 MRPL55Q7Z7F7 128 aaKnown RBP9.15□□□□□ -0.94
RTFDC1-201ENST00000023939 C9orf163Q8N9P6 203 aa9.15□□□□□ -0.94
RTFDC1-201ENST00000023939 CSMD3Q7Z407 3707 aa9.14□□□□□ -0.95
RTFDC1-201ENST00000023939 KRTAP4-16G5E9R7 235 aaPredicted RBP9.14□□□□□ -0.95
RTFDC1-201ENST00000023939 DNAH7Q8WXX0 4024 aa9.13□□□□□ -0.95
RTFDC1-201ENST00000023939 FAM19A5Q7Z5A7 132 aaPredicted RBP9.13□□□□□ -0.95
RTFDC1-201ENST00000023939 C14orf132Q9NPU4 83 aa9.13□□□□□ -0.95
RTFDC1-201ENST00000023939 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-201ENST00000023939 SCGB1A1P11684 91 aa9.12□□□□□ -0.95
RTFDC1-201ENST00000023939 SDIM1Q6ZPB5 146 aa9.12□□□□□ -0.95
RTFDC1-201ENST00000023939 TGP01266 2768 aa9.11□□□□□ -0.95
RTFDC1-201ENST00000023939 MT-ATP8P03928 68 aa9.11□□□□□ -0.95
RTFDC1-201ENST00000023939 VPS13DQ5THJ4 4388 aa9.11□□□□□ -0.95
RTFDC1-201ENST00000023939 RPL37AP8A6NKH3 93 aa9.11□□□□□ -0.95
RTFDC1-201ENST00000023939 STARD9Q9P2P6 4700 aa9.1□□□□□ -0.95
RTFDC1-201ENST00000023939 B5MCH6 92 aa9.1□□□□□ -0.95
RTFDC1-201ENST00000023939 M0R2N4 97 aa9.1□□□□□ -0.95
RTFDC1-201ENST00000023939 Q6ZRX8 168 aa9.1□□□□□ -0.95
RTFDC1-201ENST00000023939 DHRS4-AS1Q9P1J3 65 aa9.1□□□□□ -0.95
RTFDC1-201ENST00000023939 GAGE2AQ6NT46 116 aa9.09□□□□□ -0.95
RTFDC1-201ENST00000023939 IGKV2-24A0A0C4DH68 120 aa9.08□□□□□ -0.96
RTFDC1-201ENST00000023939 A0A1W2PNN7 141 aa9.08□□□□□ -0.96
RTFDC1-201ENST00000023939 CCKP06307 115 aa9.08□□□□□ -0.96
RTFDC1-201ENST00000023939 WWC2-AS2Q96NR7 200 aa9.08□□□□□ -0.96
RTFDC1-201ENST00000023939 LINC00474Q9P2X8 69 aa9.08□□□□□ -0.96
RTFDC1-201ENST00000023939 A0A087WTM6 91 aa9.08□□□□□ -0.96
RTFDC1-201ENST00000023939 LOC110117498A0A087WWA1 95 aa9.07□□□□□ -0.96
RTFDC1-201ENST00000023939 ETDCA0A1B0GVM5 59 aa9.07□□□□□ -0.96
RTFDC1-201ENST00000023939 RBM3P98179 157 aaKnown RBP9.07□□□□□ -0.96
RTFDC1-201ENST00000023939 LYSTQ99698 3801 aa9.06□□□□□ -0.96
RTFDC1-201ENST00000023939 REG3GQ6UW15 175 aa9.06□□□□□ -0.96
RTFDC1-201ENST00000023939 LAMTOR3Q9UHA4 124 aa9.06□□□□□ -0.96
RTFDC1-201ENST00000023939 PDE6GP18545 87 aa9.05□□□□□ -0.96
RTFDC1-201ENST00000023939 LINC00643Q86TS7 51 aa9.05□□□□□ -0.96
RTFDC1-201ENST00000023939 DNAH10Q8IVF4 4471 aa9.05□□□□□ -0.96
RTFDC1-201ENST00000023939 Q9BRP9 147 aa9.04□□□□□ -0.96
RTFDC1-201ENST00000023939 NDUFV3P56181 108 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-201ENST00000023939 Q6Q795 121 aa9.03□□□□□ -0.96
RTFDC1-201ENST00000023939 Q6ZQT0 140 aa9.03□□□□□ -0.96
RTFDC1-201ENST00000023939 SMCR5Q8TEV8 140 aa9.03□□□□□ -0.96
RTFDC1-201ENST00000023939 TENM2Q9NT68 2774 aa9.03□□□□□ -0.96
RTFDC1-201ENST00000023939 EPM2AB3EWF7 344 aa9.02□□□□□ -0.96
RTFDC1-201ENST00000023939 CHTF8P0CG12 524 aa9.02□□□□□ -0.96
RTFDC1-201ENST00000023939 C1orf134Q5TEV5 83 aa9.02□□□□□ -0.96
RTFDC1-201ENST00000023939 A0A1B0GV72 72 aa9.02□□□□□ -0.97
RTFDC1-201ENST00000023939 LINC00476Q8WZB0 136 aa9.02□□□□□ -0.97
RTFDC1-201ENST00000023939 TRBV7-4A0A0J9YYF1 115 aa9.01□□□□□ -0.97
RTFDC1-201ENST00000023939 TRBV7-7A0A0K0K1E9 115 aa9.01□□□□□ -0.97
RTFDC1-201ENST00000023939 LINC01547P58512 204 aaPredicted RBP9.01□□□□□ -0.97
RTFDC1-201ENST00000023939 DSCR8Q96T75 97 aa9.01□□□□□ -0.97
RTFDC1-201ENST00000023939 IGLV5-48A0A075B6I7 105 aa9□□□□□ -0.97
RTFDC1-201ENST00000023939 LY6G6CO95867 125 aa9□□□□□ -0.97
RTFDC1-201ENST00000023939 LINC00846Q9NV44 126 aa9□□□□□ -0.97
RTFDC1-201ENST00000023939 Q8N377 158 aa9□□□□□ -0.97
RTFDC1-201ENST00000023939 C3orf84H3BNL1 204 aa8.99□□□□□ -0.97
RTFDC1-201ENST00000023939 SPACA4Q8TDM5 124 aa8.99□□□□□ -0.97
RTFDC1-201ENST00000023939 IMUPQ9GZP8 106 aa8.99□□□□□ -0.97
RTFDC1-201ENST00000023939 H0Y9J4 135 aa8.97□□□□□ -0.97
RTFDC1-201ENST00000023939 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
RTFDC1-201ENST00000023939 PANO1I0J062 215 aa8.97□□□□□ -0.97
RTFDC1-201ENST00000023939 RTL8CO15255 209 aa8.97□□□□□ -0.97
RTFDC1-201ENST00000023939 UBE2BP63146 152 aa8.97□□□□□ -0.97
RTFDC1-201ENST00000023939 ERC2-IT1O76042 136 aa8.96□□□□□ -0.98
RTFDC1-201ENST00000023939 Q6JHZ5 121 aa8.95□□□□□ -0.98
RTFDC1-201ENST00000023939 FAM19A1Q7Z5A9 133 aa8.95□□□□□ -0.98
RTFDC1-201ENST00000023939 KRTAP11-1Q8IUC1 163 aa8.95□□□□□ -0.98
RTFDC1-201ENST00000023939 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.95□□□□□ -0.98
RTFDC1-201ENST00000023939 ST20-AS1Q8NBB2 130 aa8.94□□□□□ -0.98
RTFDC1-201ENST00000023939 DEFB105AQ8NG35 78 aa8.94□□□□□ -0.98
RTFDC1-201ENST00000023939 TNP2Q05952 138 aa8.93□□□□□ -0.98
RTFDC1-201ENST00000023939 PRLHP81277 87 aa8.91□□□□□ -0.98
RTFDC1-201ENST00000023939 ATP5EP2Q5VTU8 51 aa8.91□□□□□ -0.98
RTFDC1-201ENST00000023939 DNAH6Q9C0G6 4158 aa8.91□□□□□ -0.98
RTFDC1-201ENST00000023939 IGLV5-52A0A0A0MRZ9 124 aa8.91□□□□□ -0.98
RTFDC1-201ENST00000023939 UBL5Q9BZL1 73 aa8.91□□□□□ -0.98
RTFDC1-201ENST00000023939 BCE1O60756 84 aa8.9□□□□□ -0.98
RTFDC1-201ENST00000023939 DPH3Q96FX2 82 aa8.9□□□□□ -0.98
RTFDC1-201ENST00000023939 PLAC8Q9NZF1 115 aa8.9□□□□□ -0.98
RTFDC1-201ENST00000023939 SMIM29Q86T20 159 aa8.88□□□□□ -0.99
RTFDC1-201ENST00000023939 A0A1B0GW54 56 aa8.88□□□□□ -0.99
RTFDC1-201ENST00000023939 KRTAP13-1Q8IUC0 172 aa8.88□□□□□ -0.99
RTFDC1-201ENST00000023939 ALMS1Q8TCU4 4167 aa8.87□□□□□ -0.99
RTFDC1-201ENST00000023939 SPRR1BP22528 89 aa8.87□□□□□ -0.99
RTFDC1-201ENST00000023939 HIGD2AQ9BW72 106 aa8.87□□□□□ -0.99
RTFDC1-201ENST00000023939 DNAH17Q9UFH2 4485 aa8.86□□□□□ -0.99
RTFDC1-201ENST00000023939 C3orf22Q8N5N4 141 aa8.86□□□□□ -0.99
RTFDC1-201ENST00000023939 KMT2AQ03164 3969 aa8.85□□□□□ -0.99
RTFDC1-201ENST00000023939 FUSP35637 526 aaKnown RBP eCLIP8.85□□□□□ -0.99
RTFDC1-201ENST00000023939 UBE2AP49459 152 aa8.85□□□□□ -0.99
RTFDC1-201ENST00000023939 Q6ZVQ6 151 aa8.85□□□□□ -0.99
RTFDC1-201ENST00000023939 DNAH2Q9P225 4427 aa8.85□□□□□ -0.99
RTFDC1-201ENST00000023939 IGLV8-61A0A075B6I0 122 aa8.84□□□□□ -0.99
RTFDC1-201ENST00000023939 IGKV3D-7A0A0C4DH55 119 aa8.84□□□□□ -0.99
RTFDC1-201ENST00000023939 C1orf137Q5JT78 98 aa8.83□□□□□ -1
RTFDC1-201ENST00000023939 F8WEM9 126 aa8.82□□□□□ -1
RTFDC1-201ENST00000023939 A0A1W2PNM2 257 aa8.8□□□□□ -1
RTFDC1-201ENST00000023939 CXCL6P80162 114 aa8.8□□□□□ -1
RTFDC1-201ENST00000023939 Q8NBF4 154 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms