RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 PLNP26678 52 aa3.47□□□□□ -1.85
LINC00550-202ENST00000629570 RPL37AP61513 92 aaKnown RBP3.47□□□□□ -1.85
LINC00550-202ENST00000629570 C9orf129Q5T035 196 aaKnown RBP3.47□□□□□ -1.85
LINC00550-202ENST00000629570 FAM19A5Q7Z5A7 132 aaPredicted RBP3.47□□□□□ -1.85
LINC00550-202ENST00000629570 KRTAP7-1Q8IUC3 87 aa3.47□□□□□ -1.85
LINC00550-202ENST00000629570 MAP1LC3CQ9BXW4 147 aa3.47□□□□□ -1.85
LINC00550-202ENST00000629570 XAGE1AQ9HD64 81 aa3.47□□□□□ -1.85
LINC00550-202ENST00000629570 SYS1-DBNDD2H3BUS1 97 aa3.46□□□□□ -1.86
LINC00550-202ENST00000629570 DPM2O94777 84 aa3.46□□□□□ -1.86
LINC00550-202ENST00000629570 HNRNPA3P51991 378 aaKnown RBP3.46□□□□□ -1.86
LINC00550-202ENST00000629570 TSPEAR-AS2P59090 65 aa3.46□□□□□ -1.86
LINC00550-202ENST00000629570 ZNF625Q96I27 306 aaPredicted RBP3.46□□□□□ -1.86
LINC00550-202ENST00000629570 DMBT1Q9UGM3 2413 aaPredicted RBP3.45□□□□□ -1.86
LINC00550-202ENST00000629570 IGKCP01834 107 aa3.45□□□□□ -1.86
LINC00550-202ENST00000629570 C3orf79P0CE67 100 aa3.45□□□□□ -1.86
LINC00550-202ENST00000629570 INAFM2P0DMQ5 153 aa3.45□□□□□ -1.86
LINC00550-202ENST00000629570 PFN2P35080 140 aa3.45□□□□□ -1.86
LINC00550-202ENST00000629570 KRTDAPP60985 99 aa3.45□□□□□ -1.86
LINC00550-202ENST00000629570 PRR3P79522 188 aaKnown RBP3.45□□□□□ -1.86
LINC00550-202ENST00000629570 SERTAD4-AS1Q5TG53 156 aa3.45□□□□□ -1.86
LINC00550-202ENST00000629570 LINC01545Q5VT33 79 aa3.45□□□□□ -1.86
LINC00550-202ENST00000629570 PHF5AQ7RTV0 110 aaKnown RBP3.45□□□□□ -1.86
LINC00550-202ENST00000629570 KRTAP11-1Q8IUC1 163 aa3.45□□□□□ -1.86
LINC00550-202ENST00000629570 C7orf33Q8WU49 177 aa3.45□□□□□ -1.86
LINC00550-202ENST00000629570 ERG28Q9UKR5 140 aa3.45□□□□□ -1.86
LINC00550-202ENST00000629570 M0QXV9 152 aa3.44□□□□□ -1.86
LINC00550-202ENST00000629570 SFTA2Q6UW10 78 aa3.44□□□□□ -1.86
LINC00550-202ENST00000629570 PET117Q6UWS5 81 aa3.44□□□□□ -1.86
LINC00550-202ENST00000629570 HIST3H2BBQ8N257 126 aa3.44□□□□□ -1.86
LINC00550-202ENST00000629570 NDUFA12Q9UI09 145 aa3.44□□□□□ -1.86
LINC00550-202ENST00000629570 A0A0U1RRA0 63 aa3.43□□□□□ -1.86
LINC00550-202ENST00000629570 J3QQQ9 107 aa3.43□□□□□ -1.86
LINC00550-202ENST00000629570 LEPROTO15243 131 aa3.43□□□□□ -1.86
LINC00550-202ENST00000629570 HERVK_113P61574 105 aa3.43□□□□□ -1.86
LINC00550-202ENST00000629570 HIST1H2BLQ99880 126 aa3.43□□□□□ -1.86
LINC00550-202ENST00000629570 SND1-IT1Q9HBX3 110 aa3.43□□□□□ -1.86
LINC00550-202ENST00000629570 PSORS1C2Q9UIG4 136 aa3.43□□□□□ -1.86
LINC00550-202ENST00000629570 MYMXA0A1B0GTQ4 84 aa3.42□□□□□ -1.86
LINC00550-202ENST00000629570 E9PLD3 99 aa3.42□□□□□ -1.86
LINC00550-202ENST00000629570 S100A6P06703 90 aa3.42□□□□□ -1.86
LINC00550-202ENST00000629570 SMIM13P0DJ93 91 aa3.42□□□□□ -1.86
LINC00550-202ENST00000629570 S100A2P29034 98 aa3.42□□□□□ -1.86
LINC00550-202ENST00000629570 LINC00158P58513 81 aa3.42□□□□□ -1.86
LINC00550-202ENST00000629570 SNRPEP62304 92 aaKnown RBP3.42□□□□□ -1.86
LINC00550-202ENST00000629570 COX17Q14061 63 aa3.42□□□□□ -1.86
LINC00550-202ENST00000629570 ATOH7Q8N100 152 aa3.42□□□□□ -1.86
LINC00550-202ENST00000629570 Q8NDZ9 215 aa3.42□□□□□ -1.86
LINC00550-202ENST00000629570 PLEKHB2Q96CS7 222 aa3.42□□□□□ -1.86
LINC00550-202ENST00000629570 C22orf24Q9Y442 160 aa3.42□□□□□ -1.86
LINC00550-202ENST00000629570 LRP1Q07954 4544 aaKnown RBP3.42□□□□□ -1.86
LINC00550-202ENST00000629570 IGKV2D-26A0A0A0MRZ7 120 aa3.41□□□□□ -1.86
LINC00550-202ENST00000629570 C20orf202A1L168 122 aa3.41□□□□□ -1.86
LINC00550-202ENST00000629570 GAGE10A6NGK3 116 aa3.41□□□□□ -1.86
LINC00550-202ENST00000629570 LGALS3P17931 250 aaKnown RBP3.41□□□□□ -1.86
LINC00550-202ENST00000629570 HERV-K104P63124 156 aa3.41□□□□□ -1.86
LINC00550-202ENST00000629570 UBE2BP63146 152 aa3.41□□□□□ -1.86
LINC00550-202ENST00000629570 MEIG1Q5JSS6 88 aa3.41□□□□□ -1.86
LINC00550-202ENST00000629570 C1orf137Q5JT78 98 aa3.41□□□□□ -1.86
LINC00550-202ENST00000629570 MRPL55Q7Z7F7 128 aaKnown RBP3.41□□□□□ -1.86
LINC00550-202ENST00000629570 MIR7-3HGQ8N6C7 128 aa3.41□□□□□ -1.86
LINC00550-202ENST00000629570 DAND5Q8N907 189 aa3.41□□□□□ -1.86
LINC00550-202ENST00000629570 TTTY13Q9BZ97 58 aa3.41□□□□□ -1.86
LINC00550-202ENST00000629570 IGLV5-37A0A075B6J1 123 aa3.4□□□□□ -1.87
LINC00550-202ENST00000629570 C5orf52A6NGY3 159 aa3.4□□□□□ -1.87
LINC00550-202ENST00000629570 RPL37AP8A6NKH3 93 aa3.4□□□□□ -1.87
LINC00550-202ENST00000629570 VPREB1P12018 145 aa3.4□□□□□ -1.87
LINC00550-202ENST00000629570 NMUP48645 174 aa3.4□□□□□ -1.87
LINC00550-202ENST00000629570 NKAPP1Q8N9T2 125 aa3.4□□□□□ -1.87
LINC00550-202ENST00000629570 TP73-AS1Q9UF72 201 aa3.4□□□□□ -1.87
LINC00550-202ENST00000629570 PKHD1L1Q86WI1 4243 aa3.4□□□□□ -1.87
LINC00550-202ENST00000629570 HERC1Q15751 4861 aa3.4□□□□□ -1.87
LINC00550-202ENST00000629570 IGKV2-28A0A075B6P5 120 aa3.39□□□□□ -1.87
LINC00550-202ENST00000629570 A0A0J9YXY3 114 aa3.39□□□□□ -1.87
LINC00550-202ENST00000629570 IGKV2D-28P01615 120 aa3.39□□□□□ -1.87
LINC00550-202ENST00000629570 SRSF9Q13242 221 aaKnown RBP eCLIP3.39□□□□□ -1.87
LINC00550-202ENST00000629570 LBHQ53QV2 105 aaPredicted RBP3.39□□□□□ -1.87
LINC00550-202ENST00000629570 BOD1L2Q8IYS8 172 aa3.39□□□□□ -1.87
LINC00550-202ENST00000629570 LINC00167Q96N53 147 aa3.39□□□□□ -1.87
LINC00550-202ENST00000629570 ZNF815PA8K554 130 aa3.38□□□□□ -1.87
LINC00550-202ENST00000629570 LINC00587B1AMM8 73 aa3.38□□□□□ -1.87
LINC00550-202ENST00000629570 NCR3O14931 201 aa3.38□□□□□ -1.87
LINC00550-202ENST00000629570 IGLV7-43P04211 117 aa3.38□□□□□ -1.87
LINC00550-202ENST00000629570 RPL24P83731 157 aaKnown RBP3.38□□□□□ -1.87
LINC00550-202ENST00000629570 ADAMTSL4-AS1Q5T5F5 129 aa3.38□□□□□ -1.87
LINC00550-202ENST00000629570 SPINK6Q6UWN8 80 aa3.38□□□□□ -1.87
LINC00550-202ENST00000629570 LITAFQ99732 161 aa3.38□□□□□ -1.87
LINC00550-202ENST00000629570 FAT3Q8TDW7 4589 aa3.38□□□□□ -1.87
LINC00550-202ENST00000629570 KRTAP29-1A8MX34 341 aaPredicted RBP3.37□□□□□ -1.87
LINC00550-202ENST00000629570 TMEM238C9JI98 176 aa3.37□□□□□ -1.87
LINC00550-202ENST00000629570 NPC2P61916 151 aa3.37□□□□□ -1.87
LINC00550-202ENST00000629570 SOSTDC1Q6X4U4 206 aa3.37□□□□□ -1.87
LINC00550-202ENST00000629570 PCP2Q8IVA1 136 aa3.37□□□□□ -1.87
LINC00550-202ENST00000629570 TMA7Q9Y2S6 64 aaKnown RBP3.37□□□□□ -1.87
LINC00550-202ENST00000629570 IGLV1-50A0A075B6I6 118 aa3.36□□□□□ -1.87
LINC00550-202ENST00000629570 LOC107984156A0A0G2JMH3 177 aa3.36□□□□□ -1.87
LINC00550-202ENST00000629570 BCE1O60756 84 aa3.36□□□□□ -1.87
LINC00550-202ENST00000629570 SCGB1D1O95968 90 aa3.36□□□□□ -1.87
LINC00550-202ENST00000629570 OXTP01178 125 aa3.36□□□□□ -1.87
LINC00550-202ENST00000629570 MT1HL1P0DM35 61 aa3.36□□□□□ -1.87
LINC00550-202ENST00000629570 AKR1D1P51857 326 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms