RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 A0A1W2PNN7 141 aa5.05□□□□□ -1.6
CHD2-213ENST00000628118 C3orf79P0CE67 100 aa5.05□□□□□ -1.6
CHD2-213ENST00000628118 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
CHD2-213ENST00000628118 ERG28Q9UKR5 140 aa5.05□□□□□ -1.6
CHD2-213ENST00000628118 PLA2G2DQ9UNK4 145 aa5.05□□□□□ -1.6
CHD2-213ENST00000628118 E9PLD3 99 aa5.04□□□□□ -1.6
CHD2-213ENST00000628118 LGALS3P17931 250 aaKnown RBP5.04□□□□□ -1.6
CHD2-213ENST00000628118 KRTDAPP60985 99 aa5.04□□□□□ -1.6
CHD2-213ENST00000628118 C9orf129Q5T035 196 aaKnown RBP5.04□□□□□ -1.6
CHD2-213ENST00000628118 HIST3H2BBQ8N257 126 aa5.04□□□□□ -1.6
CHD2-213ENST00000628118 PMCHL2Q9BQD1 86 aa5.04□□□□□ -1.6
CHD2-213ENST00000628118 CDIP1Q9H305 208 aa5.04□□□□□ -1.6
CHD2-213ENST00000628118 TP73-AS1Q9UF72 201 aa5.04□□□□□ -1.6
CHD2-213ENST00000628118 NDUFA12Q9UI09 145 aa5.04□□□□□ -1.6
CHD2-213ENST00000628118 J3QQQ9 107 aa5.03□□□□□ -1.6
CHD2-213ENST00000628118 SNRPEP62304 92 aaKnown RBP5.03□□□□□ -1.6
CHD2-213ENST00000628118 LBHQ53QV2 105 aaPredicted RBP5.03□□□□□ -1.6
CHD2-213ENST00000628118 KRTAP17-1Q9BYP8 105 aa5.03□□□□□ -1.6
CHD2-213ENST00000628118 IGLV5-37A0A075B6J1 123 aa5.02□□□□□ -1.61
CHD2-213ENST00000628118 M0QXV9 152 aa5.02□□□□□ -1.61
CHD2-213ENST00000628118 INAFM2P0DMQ5 153 aa5.02□□□□□ -1.61
CHD2-213ENST00000628118 PFN2P35080 140 aa5.02□□□□□ -1.61
CHD2-213ENST00000628118 RPL24P83731 157 aaKnown RBP5.02□□□□□ -1.61
CHD2-213ENST00000628118 MEIG1Q5JSS6 88 aa5.02□□□□□ -1.61
CHD2-213ENST00000628118 HIST1H2BLQ99880 126 aa5.02□□□□□ -1.61
CHD2-213ENST00000628118 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
CHD2-213ENST00000628118 XAGE1AQ9HD64 81 aa5.02□□□□□ -1.61
CHD2-213ENST00000628118 FAM168BA1KXE4 195 aa5.01□□□□□ -1.61
CHD2-213ENST00000628118 C5orf52A6NGY3 159 aa5.01□□□□□ -1.61
CHD2-213ENST00000628118 LINC00158P58513 81 aa5.01□□□□□ -1.61
CHD2-213ENST00000628118 KRTAP10-4P60372 401 aaPredicted RBP5.01□□□□□ -1.61
CHD2-213ENST00000628118 PRR3P79522 188 aaKnown RBP5.01□□□□□ -1.61
CHD2-213ENST00000628118 FAM19A5Q7Z5A7 132 aaPredicted RBP5.01□□□□□ -1.61
CHD2-213ENST00000628118 SND1-IT1Q9HBX3 110 aa5.01□□□□□ -1.61
CHD2-213ENST00000628118 TSPEAR-AS2P59090 65 aa5□□□□□ -1.61
CHD2-213ENST00000628118 PHF5AQ7RTV0 110 aaKnown RBP5□□□□□ -1.61
CHD2-213ENST00000628118 C22orf24Q9Y442 160 aa5□□□□□ -1.61
CHD2-213ENST00000628118 LOC107984156A0A0G2JMH3 177 aa4.99□□□□□ -1.61
CHD2-213ENST00000628118 SMIM13P0DJ93 91 aa4.99□□□□□ -1.61
CHD2-213ENST00000628118 UBE2BP63146 152 aa4.99□□□□□ -1.61
CHD2-213ENST00000628118 SERTAD4-AS1Q5TG53 156 aa4.99□□□□□ -1.61
CHD2-213ENST00000628118 MRPL55Q7Z7F7 128 aaKnown RBP4.99□□□□□ -1.61
CHD2-213ENST00000628118 KRTAP7-1Q8IUC3 87 aa4.99□□□□□ -1.61
CHD2-213ENST00000628118 ARL17AQ8IVW1 177 aa4.99□□□□□ -1.61
CHD2-213ENST00000628118 NKAPP1Q8N9T2 125 aa4.99□□□□□ -1.61
CHD2-213ENST00000628118 HSBP1L1C9JCN9 74 aa4.98□□□□□ -1.61
CHD2-213ENST00000628118 TIMM17BO60830 172 aa4.98□□□□□ -1.61
CHD2-213ENST00000628118 MIR7-3HGQ8N6C7 128 aa4.98□□□□□ -1.61
CHD2-213ENST00000628118 PSORS1C2Q9UIG4 136 aa4.98□□□□□ -1.61
CHD2-213ENST00000628118 ABCA13Q86UQ4 5058 aa4.98□□□□□ -1.61
CHD2-213ENST00000628118 IGKV2D-26A0A0A0MRZ7 120 aa4.97□□□□□ -1.61
CHD2-213ENST00000628118 A0A0J9YXY3 114 aa4.97□□□□□ -1.61
CHD2-213ENST00000628118 ZNF815PA8K554 130 aa4.97□□□□□ -1.61
CHD2-213ENST00000628118 VPREB1P12018 145 aa4.97□□□□□ -1.61
CHD2-213ENST00000628118 SPINK6Q6UWN8 80 aa4.97□□□□□ -1.61
CHD2-213ENST00000628118 MIEN1Q9BRT3 115 aa4.97□□□□□ -1.61
CHD2-213ENST00000628118 A0A0U1RRA0 63 aa4.96□□□□□ -1.62
CHD2-213ENST00000628118 C1orf137Q5JT78 98 aa4.96□□□□□ -1.62
CHD2-213ENST00000628118 COPS9Q8WXC6 57 aa4.96□□□□□ -1.62
CHD2-213ENST00000628118 LINC00167Q96N53 147 aa4.96□□□□□ -1.62
CHD2-213ENST00000628118 PKHD1L1Q86WI1 4243 aa4.95□□□□□ -1.62
CHD2-213ENST00000628118 PCLOQ9Y6V0 5065 aa4.95□□□□□ -1.62
CHD2-213ENST00000628118 M0R378 163 aa4.95□□□□□ -1.62
CHD2-213ENST00000628118 NDUFC2O95298 119 aa4.95□□□□□ -1.62
CHD2-213ENST00000628118 OXTP01178 125 aa4.95□□□□□ -1.62
CHD2-213ENST00000628118 IGLV7-43P04211 117 aa4.95□□□□□ -1.62
CHD2-213ENST00000628118 SRSF9Q13242 221 aaKnown RBP eCLIP4.95□□□□□ -1.62
CHD2-213ENST00000628118 Q6ZVH6 145 aa4.95□□□□□ -1.62
CHD2-213ENST00000628118 BOD1L2Q8IYS8 172 aa4.95□□□□□ -1.62
CHD2-213ENST00000628118 PPDPFQ9H3Y8 114 aa4.95□□□□□ -1.62
CHD2-213ENST00000628118 IGLV1-50A0A075B6I6 118 aa4.94□□□□□ -1.62
CHD2-213ENST00000628118 TRBV10-2A0A0K0K1G8 114 aa4.94□□□□□ -1.62
CHD2-213ENST00000628118 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
CHD2-213ENST00000628118 TMEM238C9JI98 176 aa4.94□□□□□ -1.62
CHD2-213ENST00000628118 SCGB1D1O95968 90 aa4.94□□□□□ -1.62
CHD2-213ENST00000628118 S100A12P80511 92 aa4.94□□□□□ -1.62
CHD2-213ENST00000628118 REG3GQ6UW15 175 aa4.94□□□□□ -1.62
CHD2-213ENST00000628118 SCGB1D4Q6XE38 83 aa4.94□□□□□ -1.62
CHD2-213ENST00000628118 ATOH7Q8N100 152 aa4.94□□□□□ -1.62
CHD2-213ENST00000628118 CBY1Q9Y3M2 126 aa4.94□□□□□ -1.62
CHD2-213ENST00000628118 FLG2Q5D862 2391 aaPredicted RBP4.93□□□□□ -1.62
CHD2-213ENST00000628118 BCE1O60756 84 aa4.93□□□□□ -1.62
CHD2-213ENST00000628118 HNRNPA3P51991 378 aaKnown RBP4.93□□□□□ -1.62
CHD2-213ENST00000628118 KRTAP11-1Q8IUC1 163 aa4.93□□□□□ -1.62
CHD2-213ENST00000628118 DIRC1Q969H9 104 aa4.93□□□□□ -1.62
CHD2-213ENST00000628118 SPANXDQ9BXN6 97 aa4.93□□□□□ -1.62
CHD2-213ENST00000628118 SPANXB1Q9NS25 103 aaPredicted RBP4.93□□□□□ -1.62
CHD2-213ENST00000628118 SPANXCQ9NY87 97 aa4.93□□□□□ -1.62
CHD2-213ENST00000628118 GAGE10A6NGK3 116 aa4.92□□□□□ -1.62
CHD2-213ENST00000628118 RPL37AP8A6NKH3 93 aa4.92□□□□□ -1.62
CHD2-213ENST00000628118 ZNF861PO60384 105 aa4.92□□□□□ -1.62
CHD2-213ENST00000628118 IFITM1P13164 125 aa4.92□□□□□ -1.62
CHD2-213ENST00000628118 RPL28P46779 137 aaKnown RBP4.92□□□□□ -1.62
CHD2-213ENST00000628118 JOSD1Q15040 202 aaPredicted RBP4.92□□□□□ -1.62
CHD2-213ENST00000628118 DAND5Q8N907 189 aa4.92□□□□□ -1.62
CHD2-213ENST00000628118 LITAFQ99732 161 aa4.92□□□□□ -1.62
CHD2-213ENST00000628118 PRYO14603 147 aa4.91□□□□□ -1.62
CHD2-213ENST00000628118 ADAMTSL4-AS1Q5T5F5 129 aa4.91□□□□□ -1.62
CHD2-213ENST00000628118 PCP2Q8IVA1 136 aa4.91□□□□□ -1.62
CHD2-213ENST00000628118 LINC00518Q8N0U6 118 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms