RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, human

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-222	ENST00000621967	OBSCN-AS1	Q96MR7	158 aa		11.85	□□□□□ -0.51
FAM3A-222	ENST00000621967	IMUP	Q9GZP8	106 aa		11.85	□□□□□ -0.51
FAM3A-222	ENST00000621967	NANOS2	P60321	138 aa	Known RBP	11.84	□□□□□ -0.51
FAM3A-222	ENST00000621967	LECT2	O14960	151 aa		11.84	□□□□□ -0.51
FAM3A-222	ENST00000621967	CFAP161	Q6P656	301 aa		11.84	□□□□□ -0.51
FAM3A-222	ENST00000621967		Q6ZTC4	211 aa		11.82	□□□□□ -0.52
FAM3A-222	ENST00000621967	TG	P01266	2768 aa		11.82	□□□□□ -0.52
FAM3A-222	ENST00000621967	HTN3	P15516	51 aa		11.82	□□□□□ -0.52
FAM3A-222	ENST00000621967	IGLV10-54	A0A075B6I4	117 aa		11.81	□□□□□ -0.52
FAM3A-222	ENST00000621967	C9orf129	Q5T035	196 aa	Known RBP	11.81	□□□□□ -0.52
FAM3A-222	ENST00000621967	LINC00167	Q96N53	147 aa		11.81	□□□□□ -0.52
FAM3A-222	ENST00000621967	LELP1	Q5T871	98 aa		11.8	□□□□□ -0.52
FAM3A-222	ENST00000621967	GAGE2A	Q6NT46	116 aa		11.8	□□□□□ -0.52
FAM3A-222	ENST00000621967		A0A1B0GX51	115 aa		11.79	□□□□□ -0.52
FAM3A-222	ENST00000621967	KLK5	Q9Y337	293 aa	Predicted RBP	11.78	□□□□□ -0.52
FAM3A-222	ENST00000621967	PRR3	P79522	188 aa	Known RBP	11.78	□□□□□ -0.52
FAM3A-222	ENST00000621967	TMEM126A	Q9H061	195 aa		11.77	□□□□□ -0.53
FAM3A-222	ENST00000621967	PRR34	Q9NV39	138 aa		11.77	□□□□□ -0.53
FAM3A-222	ENST00000621967	ORMDL1	Q9P0S3	153 aa		11.77	□□□□□ -0.53
FAM3A-222	ENST00000621967	DEFB131B	A0A096LNP1	70 aa		11.76	□□□□□ -0.53
FAM3A-222	ENST00000621967	TRAV10	A0A0B4J240	114 aa		11.76	□□□□□ -0.53
FAM3A-222	ENST00000621967	CCDC179	H3BU77	68 aa		11.76	□□□□□ -0.53
FAM3A-222	ENST00000621967	C9orf116	Q5BN46	136 aa	Predicted RBP	11.76	□□□□□ -0.53
FAM3A-222	ENST00000621967	MUC7	Q8TAX7	377 aa		11.76	□□□□□ -0.53
FAM3A-222	ENST00000621967	C14orf132	Q9NPU4	83 aa		11.76	□□□□□ -0.53
FAM3A-222	ENST00000621967	SLPI	P03973	132 aa		11.74	□□□□□ -0.53
FAM3A-222	ENST00000621967		Q8NDZ9	215 aa		11.74	□□□□□ -0.53
FAM3A-222	ENST00000621967	SPAG11B	Q08648	103 aa		11.74	□□□□□ -0.53
FAM3A-222	ENST00000621967	DNAH7	Q8WXX0	4024 aa		11.73	□□□□□ -0.53
FAM3A-222	ENST00000621967		B5MCH6	92 aa		11.73	□□□□□ -0.53
FAM3A-222	ENST00000621967		Q8N814	137 aa		11.73	□□□□□ -0.53
FAM3A-222	ENST00000621967	FAM236A	A0A1B0GUQ0	79 aa		11.72	□□□□□ -0.53
FAM3A-222	ENST00000621967	FAM236B	A0A1B0GV22	79 aa		11.72	□□□□□ -0.53
FAM3A-222	ENST00000621967	NCR3	O14931	201 aa		11.72	□□□□□ -0.53
FAM3A-222	ENST00000621967	C10orf25	Q5T742	122 aa		11.72	□□□□□ -0.53
FAM3A-222	ENST00000621967	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.72	□□□□□ -0.53
FAM3A-222	ENST00000621967	WWC2-AS2	Q96NR7	200 aa		11.72	□□□□□ -0.53
FAM3A-222	ENST00000621967	C6orf223	Q8N319	242 aa		11.71	□□□□□ -0.53
FAM3A-222	ENST00000621967	ENHO	Q6UWT2	76 aa		11.7	□□□□□ -0.54
FAM3A-222	ENST00000621967	KLK12	Q9UKR0	248 aa		11.7	□□□□□ -0.54
FAM3A-222	ENST00000621967	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.69	□□□□□ -0.54
FAM3A-222	ENST00000621967	NUPR2	A6NF83	97 aa		11.68	□□□□□ -0.54
FAM3A-222	ENST00000621967	LYPD5	Q6UWN5	251 aa		11.68	□□□□□ -0.54
FAM3A-222	ENST00000621967	LINC00846	Q9NV44	126 aa		11.68	□□□□□ -0.54
FAM3A-222	ENST00000621967	JMJD7-PLA2G4B	H0Y9G9	81 aa		11.67	□□□□□ -0.54
FAM3A-222	ENST00000621967		H3BNG1	76 aa		11.67	□□□□□ -0.54
FAM3A-222	ENST00000621967	TMEM256-PLSCR3	K7ERE1	68 aa		11.67	□□□□□ -0.54
FAM3A-222	ENST00000621967	C6orf99	Q4VX62	202 aa		11.67	□□□□□ -0.54
FAM3A-222	ENST00000621967	CCK	P06307	115 aa		11.66	□□□□□ -0.54
FAM3A-222	ENST00000621967	S100A7L2	Q5SY68	101 aa		11.66	□□□□□ -0.54
FAM3A-222	ENST00000621967		Q6JHZ5	121 aa		11.66	□□□□□ -0.54
FAM3A-222	ENST00000621967	LINC00526	Q96FQ7	95 aa		11.66	□□□□□ -0.54
FAM3A-222	ENST00000621967	SS18L2	Q9UHA2	77 aa		11.65	□□□□□ -0.54
FAM3A-222	ENST00000621967	CSMD3	Q7Z407	3707 aa		11.65	□□□□□ -0.54
FAM3A-222	ENST00000621967	IGLV6-57	P01721	117 aa		11.64	□□□□□ -0.55
FAM3A-222	ENST00000621967	HIST1H4A	P62805	103 aa	Known RBP	11.64	□□□□□ -0.55
FAM3A-222	ENST00000621967	LINC00575	Q6W349	94 aa		11.64	□□□□□ -0.55
FAM3A-222	ENST00000621967	STARD9	Q9P2P6	4700 aa		11.63	□□□□□ -0.55
FAM3A-222	ENST00000621967	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.63	□□□□□ -0.55
FAM3A-222	ENST00000621967	C6orf48	Q9UBA6	75 aa		11.62	□□□□□ -0.55
FAM3A-222	ENST00000621967	RPL18A	Q02543	176 aa	Known RBP	11.6	□□□□□ -0.55
FAM3A-222	ENST00000621967	KRTAP26-1	Q6PEX3	210 aa		11.59	□□□□□ -0.55
FAM3A-222	ENST00000621967	WFDC10B	Q8IUB3	73 aa		11.59	□□□□□ -0.55
FAM3A-222	ENST00000621967	PLEC	Q15149	4684 aa	Known RBP	11.59	□□□□□ -0.55
FAM3A-222	ENST00000621967	hADV29S1	A0JD25	119 aa		11.58	□□□□□ -0.55
FAM3A-222	ENST00000621967	C3orf84	H3BNL1	204 aa		11.57	□□□□□ -0.56
FAM3A-222	ENST00000621967	IGKV3D-7	A0A0C4DH55	119 aa		11.56	□□□□□ -0.56
FAM3A-222	ENST00000621967	UQCRQ	O14949	82 aa		11.56	□□□□□ -0.56
FAM3A-222	ENST00000621967	C3orf22	Q8N5N4	141 aa		11.56	□□□□□ -0.56
FAM3A-222	ENST00000621967	APLN	Q9ULZ1	77 aa		11.56	□□□□□ -0.56
FAM3A-222	ENST00000621967	ATOX1	O00244	68 aa		11.55	□□□□□ -0.56
FAM3A-222	ENST00000621967	TRBV10-3	A0A0K0K1G6	114 aa		11.54	□□□□□ -0.56
FAM3A-222	ENST00000621967	ZNF561-AS1	K7EIQ3	104 aa		11.54	□□□□□ -0.56
FAM3A-222	ENST00000621967	CASC10	Q5T4H9	136 aa		11.54	□□□□□ -0.56
FAM3A-222	ENST00000621967	XAGE1A	Q9HD64	81 aa		11.54	□□□□□ -0.56
FAM3A-222	ENST00000621967	TRAV23DV6	A0A075B6W5	121 aa		11.53	□□□□□ -0.56
FAM3A-222	ENST00000621967	TENM2	Q9NT68	2774 aa		11.53	□□□□□ -0.56
FAM3A-222	ENST00000621967	C2orf48	Q96LS8	159 aa		11.52	□□□□□ -0.56
FAM3A-222	ENST00000621967	CAMK2N2	Q96S95	79 aa		11.52	□□□□□ -0.56
FAM3A-222	ENST00000621967	LOC110117498	A0A087WWA1	95 aa		11.52	□□□□□ -0.57
FAM3A-222	ENST00000621967		H3BQ85	93 aa		11.52	□□□□□ -0.57
FAM3A-222	ENST00000621967	HIGD2B	Q4VC39	106 aa		11.52	□□□□□ -0.57
FAM3A-222	ENST00000621967	ATP5EP2	Q5VTU8	51 aa		11.52	□□□□□ -0.57
FAM3A-222	ENST00000621967	C15orf56	Q8N910	161 aa		11.52	□□□□□ -0.57
FAM3A-222	ENST00000621967	DIRC1	Q969H9	104 aa		11.52	□□□□□ -0.57
FAM3A-222	ENST00000621967	VPREB1	P12018	145 aa		11.51	□□□□□ -0.57
FAM3A-222	ENST00000621967	COX7C	P15954	63 aa		11.51	□□□□□ -0.57
FAM3A-222	ENST00000621967	ESRG	Q1W209	222 aa		11.51	□□□□□ -0.57
FAM3A-222	ENST00000621967		Q6ZQT0	140 aa		11.51	□□□□□ -0.57
FAM3A-222	ENST00000621967	RBM3	P98179	157 aa	Known RBP	11.5	□□□□□ -0.57
FAM3A-222	ENST00000621967	LYST	Q99698	3801 aa		11.5	□□□□□ -0.57
FAM3A-222	ENST00000621967		Q6ZQY7	126 aa		11.5	□□□□□ -0.57
FAM3A-222	ENST00000621967	UBE2DNL	Q8IWF7	75 aa		11.5	□□□□□ -0.57
FAM3A-222	ENST00000621967	C9orf153	Q5TBE3	101 aa		11.49	□□□□□ -0.57
FAM3A-222	ENST00000621967		Q6ZRU5	148 aa		11.49	□□□□□ -0.57
FAM3A-222	ENST00000621967		A0A087WVE0	104 aa		11.48	□□□□□ -0.57
FAM3A-222	ENST00000621967	TRBV7-6	A0A0J9YX20	115 aa		11.48	□□□□□ -0.57
FAM3A-222	ENST00000621967	ZNF73	O43830	326 aa	Predicted RBP	11.48	□□□□□ -0.57
FAM3A-222	ENST00000621967	LINC01556	Q5JQF7	62 aa		11.48	□□□□□ -0.57
FAM3A-222	ENST00000621967	ELOF1	P60002	83 aa	Known RBP	11.47	□□□□□ -0.57

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