RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 SMIM13P0DJ93 91 aa8.07□□□□□ -1.12
SH2D3A-208ENST00000599563 GAGE2BQ13066 116 aa8.07□□□□□ -1.12
SH2D3A-208ENST00000599563 VAMP8Q9BV40 100 aa8.07□□□□□ -1.12
SH2D3A-208ENST00000599563 A0A0J9YXY3 114 aa8.06□□□□□ -1.12
SH2D3A-208ENST00000599563 GAGE2EQ4V326 116 aa8.06□□□□□ -1.12
SH2D3A-208ENST00000599563 MEIG1Q5JSS6 88 aa8.06□□□□□ -1.12
SH2D3A-208ENST00000599563 GAGE2DQ9UEU5 116 aa8.06□□□□□ -1.12
SH2D3A-208ENST00000599563 NDUFC2-KCTD14E9PQ53 114 aa8.05□□□□□ -1.12
SH2D3A-208ENST00000599563 PTTG1IPP53801 180 aa8.05□□□□□ -1.12
SH2D3A-208ENST00000599563 HERV-K104P63124 156 aa8.05□□□□□ -1.12
SH2D3A-208ENST00000599563 C9orf129Q5T035 196 aaKnown RBP8.04□□□□□ -1.12
SH2D3A-208ENST00000599563 SFTA2Q6UW10 78 aa8.04□□□□□ -1.12
SH2D3A-208ENST00000599563 DAND5Q8N907 189 aa8.04□□□□□ -1.12
SH2D3A-208ENST00000599563 XAGE1AQ9HD64 81 aa8.04□□□□□ -1.12
SH2D3A-208ENST00000599563 SERTAD4-AS1Q5TG53 156 aa8.03□□□□□ -1.12
SH2D3A-208ENST00000599563 C14orf144Q96I85 54 aa8.03□□□□□ -1.12
SH2D3A-208ENST00000599563 LITAFQ99732 161 aa8.03□□□□□ -1.12
SH2D3A-208ENST00000599563 FAM168BA1KXE4 195 aa8.02□□□□□ -1.13
SH2D3A-208ENST00000599563 SMIM6P0DI80 62 aa8.02□□□□□ -1.13
SH2D3A-208ENST00000599563 COX8AP10176 69 aa8.02□□□□□ -1.13
SH2D3A-208ENST00000599563 LINC00158P58513 81 aa8.02□□□□□ -1.13
SH2D3A-208ENST00000599563 ADAMTSL4-AS1Q5T5F5 129 aa8.02□□□□□ -1.13
SH2D3A-208ENST00000599563 MIR7-3HGQ8N6C7 128 aa8.02□□□□□ -1.13
SH2D3A-208ENST00000599563 HNRNPA3P51991 378 aaKnown RBP8.01□□□□□ -1.13
SH2D3A-208ENST00000599563 NPC2P61916 151 aa8.01□□□□□ -1.13
SH2D3A-208ENST00000599563 KRTAP7-1Q8IUC3 87 aa8.01□□□□□ -1.13
SH2D3A-208ENST00000599563 BOD1L2Q8IYS8 172 aa8.01□□□□□ -1.13
SH2D3A-208ENST00000599563 SND1-IT1Q9HBX3 110 aa8.01□□□□□ -1.13
SH2D3A-208ENST00000599563 PKHD1L1Q86WI1 4243 aa8□□□□□ -1.13
SH2D3A-208ENST00000599563 A0A1W2PNN7 141 aa8□□□□□ -1.13
SH2D3A-208ENST00000599563 EIF4EBP3O60516 100 aaPredicted RBP8□□□□□ -1.13
SH2D3A-208ENST00000599563 PRR3P79522 188 aaKnown RBP8□□□□□ -1.13
SH2D3A-208ENST00000599563 COX17Q14061 63 aa8□□□□□ -1.13
SH2D3A-208ENST00000599563 SOSTDC1Q6X4U4 206 aa8□□□□□ -1.13
SH2D3A-208ENST00000599563 Q8NDZ9 215 aa8□□□□□ -1.13
SH2D3A-208ENST00000599563 SCGB1D4Q6XE38 83 aa7.99□□□□□ -1.13
SH2D3A-208ENST00000599563 FAM19A5Q7Z5A7 132 aaPredicted RBP7.98□□□□□ -1.13
SH2D3A-208ENST00000599563 LRP1Q07954 4544 aaKnown RBP7.98□□□□□ -1.13
SH2D3A-208ENST00000599563 TIMM17BO60830 172 aa7.97□□□□□ -1.13
SH2D3A-208ENST00000599563 C2orf91Q6ZV80 131 aa7.97□□□□□ -1.13
SH2D3A-208ENST00000599563 PRO1933Q9H354 126 aa7.97□□□□□ -1.13
SH2D3A-208ENST00000599563 DLEU1O43261 78 aa7.96□□□□□ -1.14
SH2D3A-208ENST00000599563 S100A12P80511 92 aa7.96□□□□□ -1.14
SH2D3A-208ENST00000599563 SLC25A34Q6PIV7 304 aa7.96□□□□□ -1.14
SH2D3A-208ENST00000599563 C12orf57Q99622 126 aa7.96□□□□□ -1.14
SH2D3A-208ENST00000599563 FAT3Q8TDW7 4589 aa7.96□□□□□ -1.14
SH2D3A-208ENST00000599563 LINC00587B1AMM8 73 aa7.95□□□□□ -1.14
SH2D3A-208ENST00000599563 TMEM238C9JI98 176 aa7.95□□□□□ -1.14
SH2D3A-208ENST00000599563 SPINK6Q6UWN8 80 aa7.95□□□□□ -1.14
SH2D3A-208ENST00000599563 SPANXDQ9BXN6 97 aa7.95□□□□□ -1.14
SH2D3A-208ENST00000599563 SPANXCQ9NY87 97 aa7.95□□□□□ -1.14
SH2D3A-208ENST00000599563 VPREB1P12018 145 aa7.94□□□□□ -1.14
SH2D3A-208ENST00000599563 REG3GQ6UW15 175 aa7.94□□□□□ -1.14
SH2D3A-208ENST00000599563 PHF5AQ7RTV0 110 aaKnown RBP7.94□□□□□ -1.14
SH2D3A-208ENST00000599563 LINC00308Q8TCZ7 52 aa7.94□□□□□ -1.14
SH2D3A-208ENST00000599563 LINC00518Q8N0U6 118 aa7.93□□□□□ -1.14
SH2D3A-208ENST00000599563 SPANXB1Q9NS25 103 aaPredicted RBP7.93□□□□□ -1.14
SH2D3A-208ENST00000599563 PLA2G2DQ9UNK4 145 aa7.93□□□□□ -1.14
SH2D3A-208ENST00000599563 LOC107984156A0A0G2JMH3 177 aa7.92□□□□□ -1.14
SH2D3A-208ENST00000599563 M0QXV9 152 aa7.92□□□□□ -1.14
SH2D3A-208ENST00000599563 KRTAP11-1Q8IUC1 163 aa7.92□□□□□ -1.14
SH2D3A-208ENST00000599563 ARL17AQ8IVW1 177 aa7.92□□□□□ -1.14
SH2D3A-208ENST00000599563 IGLV5-37A0A075B6J1 123 aa7.91□□□□□ -1.14
SH2D3A-208ENST00000599563 NCR3O14931 201 aa7.91□□□□□ -1.14
SH2D3A-208ENST00000599563 MT1HL1P0DM35 61 aa7.91□□□□□ -1.14
SH2D3A-208ENST00000599563 MUSTN1Q8IVN3 82 aa7.91□□□□□ -1.14
SH2D3A-208ENST00000599563 LINC01600Q96MT4 127 aa7.91□□□□□ -1.14
SH2D3A-208ENST00000599563 HIGD1BQ9P298 99 aa7.91□□□□□ -1.14
SH2D3A-208ENST00000599563 C22orf24Q9Y442 160 aa7.91□□□□□ -1.14
SH2D3A-208ENST00000599563 MIEN1Q9BRT3 115 aa7.9□□□□□ -1.14
SH2D3A-208ENST00000599563 UQCR10Q9UDW1 63 aa7.9□□□□□ -1.14
SH2D3A-208ENST00000599563 GAGE10A6NGK3 116 aa7.89□□□□□ -1.15
SH2D3A-208ENST00000599563 SRSF9Q13242 221 aaKnown RBP eCLIP7.89□□□□□ -1.15
SH2D3A-208ENST00000599563 PSORS1C2Q9UIG4 136 aa7.89□□□□□ -1.15
SH2D3A-208ENST00000599563 NKAPP1Q8N9T2 125 aa7.88□□□□□ -1.15
SH2D3A-208ENST00000599563 LINC00167Q96N53 147 aa7.88□□□□□ -1.15
SH2D3A-208ENST00000599563 HIST1H4GQ99525 98 aa7.88□□□□□ -1.15
SH2D3A-208ENST00000599563 IGKV2-28A0A075B6P5 120 aa7.87□□□□□ -1.15
SH2D3A-208ENST00000599563 IGKV2D-28P01615 120 aa7.87□□□□□ -1.15
SH2D3A-208ENST00000599563 IFITM1P13164 125 aa7.87□□□□□ -1.15
SH2D3A-208ENST00000599563 RPL24P83731 157 aaKnown RBP7.87□□□□□ -1.15
SH2D3A-208ENST00000599563 Q6ZVH6 145 aa7.87□□□□□ -1.15
SH2D3A-208ENST00000599563 MRPL55Q7Z7F7 128 aaKnown RBP7.87□□□□□ -1.15
SH2D3A-208ENST00000599563 RPL37AP8A6NKH3 93 aa7.86□□□□□ -1.15
SH2D3A-208ENST00000599563 NDUFC2O95298 119 aa7.86□□□□□ -1.15
SH2D3A-208ENST00000599563 C1orf137Q5JT78 98 aa7.86□□□□□ -1.15
SH2D3A-208ENST00000599563 A4D1N5 150 aa7.85□□□□□ -1.15
SH2D3A-208ENST00000599563 M0R378 163 aa7.84□□□□□ -1.15
SH2D3A-208ENST00000599563 UBE2BP63146 152 aa7.84□□□□□ -1.15
SH2D3A-208ENST00000599563 LINC00337Q8N6G1 96 aa7.84□□□□□ -1.15
SH2D3A-208ENST00000599563 DIRC1Q969H9 104 aa7.84□□□□□ -1.15
SH2D3A-208ENST00000599563 PPDPFQ9H3Y8 114 aa7.84□□□□□ -1.15
SH2D3A-208ENST00000599563 TRBV10-3A0A0K0K1G6 114 aa7.83□□□□□ -1.16
SH2D3A-208ENST00000599563 IGLV7-43P04211 117 aa7.83□□□□□ -1.16
SH2D3A-208ENST00000599563 FXYD2P54710 66 aa7.83□□□□□ -1.16
SH2D3A-208ENST00000599563 CEND1Q8N111 149 aa7.83□□□□□ -1.16
SH2D3A-208ENST00000599563 TSTD3H0UI37 97 aa7.82□□□□□ -1.16
SH2D3A-208ENST00000599563 HSD52Q0P140 79 aa7.82□□□□□ -1.16
SH2D3A-208ENST00000599563 TAL2Q16559 108 aa7.82□□□□□ -1.16
SH2D3A-208ENST00000599563 LBHQ53QV2 105 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms