RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 A0A1B0GXF2 115 aa5.21□□□□□ -1.57
SCFD1-215ENST00000555259 PRSS47A8MTI9 375 aa5.21□□□□□ -1.57
SCFD1-215ENST00000555259 PFN2P35080 140 aa5.21□□□□□ -1.57
SCFD1-215ENST00000555259 RPL24P83731 157 aaKnown RBP5.21□□□□□ -1.57
SCFD1-215ENST00000555259 SLC51BQ86UW2 128 aa5.21□□□□□ -1.57
SCFD1-215ENST00000555259 Q8NDZ9 215 aa5.21□□□□□ -1.57
SCFD1-215ENST00000555259 SND1-IT1Q9HBX3 110 aa5.21□□□□□ -1.57
SCFD1-215ENST00000555259 ATP5LO75964 103 aa5.21□□□□□ -1.58
SCFD1-215ENST00000555259 MOBPQ13875 183 aa5.21□□□□□ -1.58
SCFD1-215ENST00000555259 RGS21Q2M5E4 152 aa5.21□□□□□ -1.58
SCFD1-215ENST00000555259 LINC00483Q53H64 154 aa5.21□□□□□ -1.58
SCFD1-215ENST00000555259 PAPPA-AS1Q5QFB9 102 aa5.21□□□□□ -1.58
SCFD1-215ENST00000555259 COX6B2Q6YFQ2 88 aa5.21□□□□□ -1.58
SCFD1-215ENST00000555259 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
SCFD1-215ENST00000555259 RAB14P61106 215 aa5.2□□□□□ -1.58
SCFD1-215ENST00000555259 RPL23P62829 140 aaKnown RBP5.2□□□□□ -1.58
SCFD1-215ENST00000555259 ORMDL2Q53FV1 153 aa5.2□□□□□ -1.58
SCFD1-215ENST00000555259 Q8N8P6 123 aa5.2□□□□□ -1.58
SCFD1-215ENST00000555259 MAP1LC3AQ9H492 121 aa5.2□□□□□ -1.58
SCFD1-215ENST00000555259 IGLV5-45A0A087WSX0 123 aa5.19□□□□□ -1.58
SCFD1-215ENST00000555259 IGLV9-49A0A0B4J1Y8 123 aa5.19□□□□□ -1.58
SCFD1-215ENST00000555259 SPINK8P0C7L1 97 aa5.19□□□□□ -1.58
SCFD1-215ENST00000555259 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
SCFD1-215ENST00000555259 TINCRA0A1B0GVN0 87 aa5.18□□□□□ -1.58
SCFD1-215ENST00000555259 SRP19P09132 144 aaKnown RBP5.18□□□□□ -1.58
SCFD1-215ENST00000555259 BLOC1S1P78537 153 aa5.18□□□□□ -1.58
SCFD1-215ENST00000555259 ADIRFQ15847 76 aa5.18□□□□□ -1.58
SCFD1-215ENST00000555259 AKAP14Q86UN6 197 aa5.18□□□□□ -1.58
SCFD1-215ENST00000555259 SMCR5Q8TEV8 140 aa5.18□□□□□ -1.58
SCFD1-215ENST00000555259 TIMM17AQ99595 171 aa5.18□□□□□ -1.58
SCFD1-215ENST00000555259 LAMTOR2Q9Y2Q5 125 aa5.18□□□□□ -1.58
SCFD1-215ENST00000555259 KRTAP4-16G5E9R7 235 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-215ENST00000555259 C9orf92A6NGG3 77 aa5.16□□□□□ -1.58
SCFD1-215ENST00000555259 K7EMI3 77 aa5.16□□□□□ -1.58
SCFD1-215ENST00000555259 GAGE2AQ6NT46 116 aa5.16□□□□□ -1.58
SCFD1-215ENST00000555259 ERG28Q9UKR5 140 aa5.16□□□□□ -1.58
SCFD1-215ENST00000555259 SPRR1AP35321 89 aa5.15□□□□□ -1.59
SCFD1-215ENST00000555259 COX17Q14061 63 aa5.15□□□□□ -1.59
SCFD1-215ENST00000555259 ALKAL2Q6UX46 152 aa5.15□□□□□ -1.59
SCFD1-215ENST00000555259 ATP5L2Q7Z4Y8 100 aa5.15□□□□□ -1.59
SCFD1-215ENST00000555259 TOMM6Q96B49 74 aa5.15□□□□□ -1.59
SCFD1-215ENST00000555259 EIF4EBP3O60516 100 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-215ENST00000555259 NAT8Q9UHE5 227 aa5.14□□□□□ -1.59
SCFD1-215ENST00000555259 PRYO14603 147 aa5.13□□□□□ -1.59
SCFD1-215ENST00000555259 CFC1P0CG37 223 aa5.13□□□□□ -1.59
SCFD1-215ENST00000555259 G0S2P27469 103 aa5.13□□□□□ -1.59
SCFD1-215ENST00000555259 ERASQ7Z444 233 aa5.13□□□□□ -1.59
SCFD1-215ENST00000555259 ADCYAP1P18509 176 aa5.12□□□□□ -1.59
SCFD1-215ENST00000555259 ZNF625Q96I27 306 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-215ENST00000555259 SCGB3A1Q96QR1 104 aa5.12□□□□□ -1.59
SCFD1-215ENST00000555259 NXT2Q9NPJ8 142 aaKnown RBP5.12□□□□□ -1.59
SCFD1-215ENST00000555259 IGLV5-39A0A0G2JS06 123 aa5.12□□□□□ -1.59
SCFD1-215ENST00000555259 ETDCA0A1B0GVM5 59 aa5.12□□□□□ -1.59
SCFD1-215ENST00000555259 H3BRM9 83 aa5.12□□□□□ -1.59
SCFD1-215ENST00000555259 ERC2-IT1O76042 136 aa5.12□□□□□ -1.59
SCFD1-215ENST00000555259 KCNQ1DNQ9H478 68 aa5.12□□□□□ -1.59
SCFD1-215ENST00000555259 CST9LQ9H4G1 147 aa5.12□□□□□ -1.59
SCFD1-215ENST00000555259 IGLV6-57P01721 117 aa5.1□□□□□ -1.59
SCFD1-215ENST00000555259 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
SCFD1-215ENST00000555259 C9orf153Q5TBE3 101 aa5.1□□□□□ -1.59
SCFD1-215ENST00000555259 TCTE3Q8IZS6 198 aa5.1□□□□□ -1.59
SCFD1-215ENST00000555259 C9JQL5 133 aa5.09□□□□□ -1.59
SCFD1-215ENST00000555259 PMVKQ15126 192 aa5.08□□□□□ -1.6
SCFD1-215ENST00000555259 B5MCH6 92 aa5.08□□□□□ -1.6
SCFD1-215ENST00000555259 NCR3O14931 201 aa5.08□□□□□ -1.6
SCFD1-215ENST00000555259 RPL37P61927 97 aaKnown RBP5.08□□□□□ -1.6
SCFD1-215ENST00000555259 ANAPC16Q96DE5 110 aa5.08□□□□□ -1.6
SCFD1-215ENST00000555259 LIMD2Q9BT23 127 aa5.08□□□□□ -1.6
SCFD1-215ENST00000555259 LINC00158P58513 81 aa5.07□□□□□ -1.6
SCFD1-215ENST00000555259 Q9BRP9 147 aa5.07□□□□□ -1.6
SCFD1-215ENST00000555259 TRBV10-3A0A0K0K1G6 114 aa5.06□□□□□ -1.6
SCFD1-215ENST00000555259 IGLC3P0DOY3 106 aa5.06□□□□□ -1.6
SCFD1-215ENST00000555259 ZNF22P17026 224 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-215ENST00000555259 SFTA2Q6UW10 78 aa5.06□□□□□ -1.6
SCFD1-215ENST00000555259 BOD1L2Q8IYS8 172 aa5.06□□□□□ -1.6
SCFD1-215ENST00000555259 TRAV9-1A0A075B6T8 112 aa5.05□□□□□ -1.6
SCFD1-215ENST00000555259 A0A0U1RRA0 63 aa5.05□□□□□ -1.6
SCFD1-215ENST00000555259 LINC01549A6NIU2 74 aa5.05□□□□□ -1.6
SCFD1-215ENST00000555259 Q6Q795 121 aa5.04□□□□□ -1.6
SCFD1-215ENST00000555259 HRCT1Q6UXD1 115 aa5.04□□□□□ -1.6
SCFD1-215ENST00000555259 S100A12P80511 92 aa5.04□□□□□ -1.6
SCFD1-215ENST00000555259 Q6ZRX8 168 aa5.04□□□□□ -1.6
SCFD1-215ENST00000555259 LINC01546A6NGU7 62 aa5.01□□□□□ -1.61
SCFD1-215ENST00000555259 SMIM13P0DJ93 91 aa5.01□□□□□ -1.61
SCFD1-215ENST00000555259 PEA15Q15121 130 aa5.01□□□□□ -1.61
SCFD1-215ENST00000555259 KIAA1644Q3SXP7 199 aa5.01□□□□□ -1.61
SCFD1-215ENST00000555259 ATP6V1G1O75348 118 aa5□□□□□ -1.61
SCFD1-215ENST00000555259 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
SCFD1-215ENST00000555259 ST20-AS1Q8NBB2 130 aa5□□□□□ -1.61
SCFD1-215ENST00000555259 NDUFA6P56556 154 aa4.99□□□□□ -1.61
SCFD1-215ENST00000555259 MIR7-3HGQ8N6C7 128 aa4.99□□□□□ -1.61
SCFD1-215ENST00000555259 NEBP20929 6669 aa4.99□□□□□ -1.61
SCFD1-215ENST00000555259 C11orf86A6NJI1 115 aa4.99□□□□□ -1.61
SCFD1-215ENST00000555259 DDTP30046 118 aa4.99□□□□□ -1.61
SCFD1-215ENST00000555259 TMEM170BQ5T4T1 132 aa4.99□□□□□ -1.61
SCFD1-215ENST00000555259 MT2AP02795 61 aa4.98□□□□□ -1.61
SCFD1-215ENST00000555259 JOSD1Q15040 202 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-215ENST00000555259 MEIG1Q5JSS6 88 aa4.97□□□□□ -1.61
SCFD1-215ENST00000555259 C1orf195Q5TG92 126 aa4.97□□□□□ -1.61
SCFD1-215ENST00000555259 FA2HQ7L5A8 372 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms