RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 SCXQ7RTU7 201 aa10.34□□□□□ -0.75
LIMS2-217ENST00000545738 HERVK_113P61574 105 aa10.33□□□□□ -0.76
LIMS2-217ENST00000545738 NDUFA12Q9UI09 145 aa10.33□□□□□ -0.76
LIMS2-217ENST00000545738 NDUFC2-KCTD14E9PQ53 114 aa10.33□□□□□ -0.76
LIMS2-217ENST00000545738 CIRBP-AS1Q8TBR5 109 aa10.33□□□□□ -0.76
LIMS2-217ENST00000545738 J3QR89 54 aa10.32□□□□□ -0.76
LIMS2-217ENST00000545738 GAGE2EQ4V326 116 aa10.32□□□□□ -0.76
LIMS2-217ENST00000545738 PLEKHB2Q96CS7 222 aa10.32□□□□□ -0.76
LIMS2-217ENST00000545738 GAGE2DQ9UEU5 116 aa10.32□□□□□ -0.76
LIMS2-217ENST00000545738 C9orf129Q5T035 196 aaKnown RBP10.31□□□□□ -0.76
LIMS2-217ENST00000545738 KRTAP7-1Q8IUC3 87 aa10.31□□□□□ -0.76
LIMS2-217ENST00000545738 CDK2AP2O75956 126 aa10.3□□□□□ -0.76
LIMS2-217ENST00000545738 PFN2P35080 140 aa10.3□□□□□ -0.76
LIMS2-217ENST00000545738 ERG28Q9UKR5 140 aa10.3□□□□□ -0.76
LIMS2-217ENST00000545738 A0A087WYN8 130 aa10.3□□□□□ -0.76
LIMS2-217ENST00000545738 FAM168BA1KXE4 195 aa10.3□□□□□ -0.76
LIMS2-217ENST00000545738 GAGE10A6NGK3 116 aa10.3□□□□□ -0.76
LIMS2-217ENST00000545738 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
LIMS2-217ENST00000545738 A0A0U1RRA0 63 aa10.29□□□□□ -0.76
LIMS2-217ENST00000545738 A0A1W2PNN7 141 aa10.29□□□□□ -0.76
LIMS2-217ENST00000545738 LGALS3P17931 250 aaKnown RBP10.28□□□□□ -0.76
LIMS2-217ENST00000545738 BVES-AS1Q5T3Y7 98 aa10.27□□□□□ -0.76
LIMS2-217ENST00000545738 PCP2Q8IVA1 136 aa10.27□□□□□ -0.76
LIMS2-217ENST00000545738 TP73-AS1Q9UF72 201 aa10.27□□□□□ -0.76
LIMS2-217ENST00000545738 MYMXA0A1B0GTQ4 84 aa10.27□□□□□ -0.77
LIMS2-217ENST00000545738 SMIM13P0DJ93 91 aa10.27□□□□□ -0.77
LIMS2-217ENST00000545738 NMUP48645 174 aa10.27□□□□□ -0.77
LIMS2-217ENST00000545738 SFTA2Q6UW10 78 aa10.26□□□□□ -0.77
LIMS2-217ENST00000545738 PLAC8Q9NZF1 115 aa10.26□□□□□ -0.77
LIMS2-217ENST00000545738 SMR3BP02814 79 aaPredicted RBP10.25□□□□□ -0.77
LIMS2-217ENST00000545738 Q8NDZ9 215 aa10.25□□□□□ -0.77
LIMS2-217ENST00000545738 A0A0J9YXY3 114 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 A6NDN8 102 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 EPM2AB3EWF7 344 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 K7EP34 96 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 HERV-K104P63124 156 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 Q6ZVH6 145 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 DAND5Q8N907 189 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 ZNF815PA8K554 130 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 TSPAN13O95857 204 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 HSD52Q0P140 79 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 SERTAD4-AS1Q5TG53 156 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 LINC00474Q9P2X8 69 aa10.24□□□□□ -0.77
LIMS2-217ENST00000545738 COX17Q14061 63 aa10.23□□□□□ -0.77
LIMS2-217ENST00000545738 MEIG1Q5JSS6 88 aa10.23□□□□□ -0.77
LIMS2-217ENST00000545738 ADAMTSL4-AS1Q5T5F5 129 aa10.23□□□□□ -0.77
LIMS2-217ENST00000545738 SLC25A34Q6PIV7 304 aa10.23□□□□□ -0.77
LIMS2-217ENST00000545738 DPH3Q96FX2 82 aa10.23□□□□□ -0.77
LIMS2-217ENST00000545738 LITAFQ99732 161 aa10.23□□□□□ -0.77
LIMS2-217ENST00000545738 LINC00158P58513 81 aa10.22□□□□□ -0.77
LIMS2-217ENST00000545738 MIR7-3HGQ8N6C7 128 aa10.22□□□□□ -0.77
LIMS2-217ENST00000545738 PKIGQ9Y2B9 76 aa10.22□□□□□ -0.77
LIMS2-217ENST00000545738 EIF4EBP3O60516 100 aaPredicted RBP10.21□□□□□ -0.77
LIMS2-217ENST00000545738 FAM19A5Q7Z5A7 132 aaPredicted RBP10.21□□□□□ -0.77
LIMS2-217ENST00000545738 SRRM2Q9UQ35 2752 aaKnown RBP10.2□□□□□ -0.78
LIMS2-217ENST00000545738 C9orf118A6NHY6 69 aa10.2□□□□□ -0.78
LIMS2-217ENST00000545738 PHF5AQ7RTV0 110 aaKnown RBP10.19□□□□□ -0.78
LIMS2-217ENST00000545738 KRTAP11-1Q8IUC1 163 aa10.19□□□□□ -0.78
LIMS2-217ENST00000545738 ABCA13Q86UQ4 5058 aa10.18□□□□□ -0.78
LIMS2-217ENST00000545738 SOSTDC1Q6X4U4 206 aa10.18□□□□□ -0.78
LIMS2-217ENST00000545738 KRTAP4-5Q9BYR2 181 aa10.17□□□□□ -0.78
LIMS2-217ENST00000545738 VPREB1P12018 145 aa10.16□□□□□ -0.78
LIMS2-217ENST00000545738 NPC2P61916 151 aa10.16□□□□□ -0.78
LIMS2-217ENST00000545738 LINC00528Q8N1L1 170 aa10.16□□□□□ -0.78
LIMS2-217ENST00000545738 M0QXV9 152 aa10.15□□□□□ -0.78
LIMS2-217ENST00000545738 KRTAP10-4P60372 401 aaPredicted RBP10.15□□□□□ -0.78
LIMS2-217ENST00000545738 BOD1L2Q8IYS8 172 aa10.14□□□□□ -0.79
LIMS2-217ENST00000545738 PLA2G2DQ9UNK4 145 aa10.14□□□□□ -0.79
LIMS2-217ENST00000545738 C22orf24Q9Y442 160 aa10.14□□□□□ -0.79
LIMS2-217ENST00000545738 COX8AP10176 69 aa10.13□□□□□ -0.79
LIMS2-217ENST00000545738 PRR3P79522 188 aaKnown RBP10.13□□□□□ -0.79
LIMS2-217ENST00000545738 Q8N1X5 172 aa10.13□□□□□ -0.79
LIMS2-217ENST00000545738 LOC107984156A0A0G2JMH3 177 aa10.13□□□□□ -0.79
LIMS2-217ENST00000545738 TIMM17BO60830 172 aa10.13□□□□□ -0.79
LIMS2-217ENST00000545738 SCGB1D4Q6XE38 83 aa10.13□□□□□ -0.79
LIMS2-217ENST00000545738 ARL17AQ8IVW1 177 aa10.13□□□□□ -0.79
LIMS2-217ENST00000545738 IGLV5-37A0A075B6J1 123 aa10.11□□□□□ -0.79
LIMS2-217ENST00000545738 FABP2P12104 132 aa10.11□□□□□ -0.79
LIMS2-217ENST00000545738 Q5VSD8 79 aa10.11□□□□□ -0.79
LIMS2-217ENST00000545738 PKHD1L1Q86WI1 4243 aa10.11□□□□□ -0.79
LIMS2-217ENST00000545738 SPCS1Q9Y6A9 102 aa10.1□□□□□ -0.79
LIMS2-217ENST00000545738 LINC00308Q8TCZ7 52 aa10.1□□□□□ -0.79
LIMS2-217ENST00000545738 A0A1W2PPM0 123 aa10.09□□□□□ -0.79
LIMS2-217ENST00000545738 F8W1H4 67 aa10.09□□□□□ -0.79
LIMS2-217ENST00000545738 MRPL55Q7Z7F7 128 aaKnown RBP10.09□□□□□ -0.79
LIMS2-217ENST00000545738 C7orf33Q8WU49 177 aa10.09□□□□□ -0.79
LIMS2-217ENST00000545738 SPANXDQ9BXN6 97 aa10.09□□□□□ -0.79
LIMS2-217ENST00000545738 SPANXCQ9NY87 97 aa10.09□□□□□ -0.79
LIMS2-217ENST00000545738 PCLOQ9Y6V0 5065 aa10.08□□□□□ -0.8
LIMS2-217ENST00000545738 RPL24P83731 157 aaKnown RBP10.08□□□□□ -0.8
LIMS2-217ENST00000545738 LINC00167Q96N53 147 aa10.08□□□□□ -0.8
LIMS2-217ENST00000545738 C2orf91Q6ZV80 131 aa10.07□□□□□ -0.8
LIMS2-217ENST00000545738 MYCBP2O75592 4640 aa10.07□□□□□ -0.8
LIMS2-217ENST00000545738 RPL37AP8A6NKH3 93 aa10.07□□□□□ -0.8
LIMS2-217ENST00000545738 NCR3O14931 201 aa10.07□□□□□ -0.8
LIMS2-217ENST00000545738 PSORS1C2Q9UIG4 136 aa10.07□□□□□ -0.8
LIMS2-217ENST00000545738 NKAPP1Q8N9T2 125 aa10.05□□□□□ -0.8
LIMS2-217ENST00000545738 H3BUT2 72 aa10.04□□□□□ -0.8
LIMS2-217ENST00000545738 RPL37AP61513 92 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms