RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 TLX1NBP0CAT3 122 aa5.46□□□□□ -1.54
TRAPPC1-202ENST00000540486 ZNF22P17026 224 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC1-202ENST00000540486 CHTOPQ9Y3Y2 248 aaKnown RBP5.46□□□□□ -1.54
TRAPPC1-202ENST00000540486 TRAV12-1A0A0B4J245 112 aa5.45□□□□□ -1.54
TRAPPC1-202ENST00000540486 PRSS2P07478 247 aa5.45□□□□□ -1.54
TRAPPC1-202ENST00000540486 KRTAP7-1Q8IUC3 87 aa5.45□□□□□ -1.54
TRAPPC1-202ENST00000540486 COX7B2Q8TF08 81 aa5.45□□□□□ -1.54
TRAPPC1-202ENST00000540486 LINC00474Q9P2X8 69 aa5.45□□□□□ -1.54
TRAPPC1-202ENST00000540486 IGLV5-39A0A0G2JS06 123 aa5.44□□□□□ -1.54
TRAPPC1-202ENST00000540486 LEPROTL1O95214 131 aa5.44□□□□□ -1.54
TRAPPC1-202ENST00000540486 FABP4P15090 132 aa5.44□□□□□ -1.54
TRAPPC1-202ENST00000540486 S100A1P23297 94 aa5.44□□□□□ -1.54
TRAPPC1-202ENST00000540486 CKS1BP61024 79 aa5.44□□□□□ -1.54
TRAPPC1-202ENST00000540486 RPL18AQ02543 176 aaKnown RBP5.44□□□□□ -1.54
TRAPPC1-202ENST00000540486 GAGE2EQ4V326 116 aa5.44□□□□□ -1.54
TRAPPC1-202ENST00000540486 GAGE2DQ9UEU5 116 aa5.44□□□□□ -1.54
TRAPPC1-202ENST00000540486 PKIGQ9Y2B9 76 aa5.44□□□□□ -1.54
TRAPPC1-202ENST00000540486 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
TRAPPC1-202ENST00000540486 NDUFC2-KCTD14E9PQ53 114 aa5.43□□□□□ -1.54
TRAPPC1-202ENST00000540486 F8VRH5 84 aa5.43□□□□□ -1.54
TRAPPC1-202ENST00000540486 H3BRM9 83 aa5.43□□□□□ -1.54
TRAPPC1-202ENST00000540486 PRR3P79522 188 aaKnown RBP5.43□□□□□ -1.54
TRAPPC1-202ENST00000540486 C9orf129Q5T035 196 aaKnown RBP5.43□□□□□ -1.54
TRAPPC1-202ENST00000540486 CXCL5P42830 114 aa5.42□□□□□ -1.54
TRAPPC1-202ENST00000540486 SRSF9Q13242 221 aaKnown RBP eCLIP5.42□□□□□ -1.54
TRAPPC1-202ENST00000540486 TMEM170BQ5T4T1 132 aa5.42□□□□□ -1.54
TRAPPC1-202ENST00000540486 TMEM223A0PJW6 202 aa5.41□□□□□ -1.54
TRAPPC1-202ENST00000540486 COA6Q5JTJ3 125 aaKnown RBP5.41□□□□□ -1.54
TRAPPC1-202ENST00000540486 HSPB8Q9UJY1 196 aa5.41□□□□□ -1.54
TRAPPC1-202ENST00000540486 H0Y8G0 127 aa5.4□□□□□ -1.54
TRAPPC1-202ENST00000540486 PHF5AQ7RTV0 110 aaKnown RBP5.4□□□□□ -1.54
TRAPPC1-202ENST00000540486 KRTAP11-1Q8IUC1 163 aa5.4□□□□□ -1.54
TRAPPC1-202ENST00000540486 PMCHL2Q9BQD1 86 aa5.4□□□□□ -1.54
TRAPPC1-202ENST00000540486 XAGE1AQ9HD64 81 aa5.4□□□□□ -1.54
TRAPPC1-202ENST00000540486 PSORS1C2Q9UIG4 136 aa5.4□□□□□ -1.54
TRAPPC1-202ENST00000540486 PRR4Q16378 134 aa5.39□□□□□ -1.55
TRAPPC1-202ENST00000540486 ZNF625Q96I27 306 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC1-202ENST00000540486 SYS1-DBNDD2H3BUS1 97 aa5.37□□□□□ -1.55
TRAPPC1-202ENST00000540486 PFN2P35080 140 aa5.37□□□□□ -1.55
TRAPPC1-202ENST00000540486 CTAG1AP78358 180 aa5.37□□□□□ -1.55
TRAPPC1-202ENST00000540486 FAM19A5Q7Z5A7 132 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC1-202ENST00000540486 MAP1LC3CQ9BXW4 147 aa5.37□□□□□ -1.55
TRAPPC1-202ENST00000540486 DPM2O94777 84 aa5.36□□□□□ -1.55
TRAPPC1-202ENST00000540486 IGKCP01834 107 aa5.36□□□□□ -1.55
TRAPPC1-202ENST00000540486 ERG28Q9UKR5 140 aa5.36□□□□□ -1.55
TRAPPC1-202ENST00000540486 C22orf24Q9Y442 160 aa5.36□□□□□ -1.55
TRAPPC1-202ENST00000540486 C3orf79P0CE67 100 aa5.35□□□□□ -1.55
TRAPPC1-202ENST00000540486 PLNP26678 52 aa5.35□□□□□ -1.55
TRAPPC1-202ENST00000540486 TSPEAR-AS2P59090 65 aa5.35□□□□□ -1.55
TRAPPC1-202ENST00000540486 COX17Q14061 63 aa5.35□□□□□ -1.55
TRAPPC1-202ENST00000540486 LINC01545Q5VT33 79 aa5.35□□□□□ -1.55
TRAPPC1-202ENST00000540486 M0QXV9 152 aa5.34□□□□□ -1.55
TRAPPC1-202ENST00000540486 LEPROTO15243 131 aa5.34□□□□□ -1.55
TRAPPC1-202ENST00000540486 PET117Q6UWS5 81 aa5.34□□□□□ -1.55
TRAPPC1-202ENST00000540486 SND1-IT1Q9HBX3 110 aa5.34□□□□□ -1.55
TRAPPC1-202ENST00000540486 A0A0U1RRA0 63 aa5.33□□□□□ -1.56
TRAPPC1-202ENST00000540486 SFTA2Q6UW10 78 aa5.33□□□□□ -1.56
TRAPPC1-202ENST00000540486 Q8NDZ9 215 aa5.33□□□□□ -1.56
TRAPPC1-202ENST00000540486 NDUFA12Q9UI09 145 aa5.33□□□□□ -1.56
TRAPPC1-202ENST00000540486 IGLV5-37A0A075B6J1 123 aa5.32□□□□□ -1.56
TRAPPC1-202ENST00000540486 J3QQQ9 107 aa5.32□□□□□ -1.56
TRAPPC1-202ENST00000540486 SMIM13P0DJ93 91 aa5.32□□□□□ -1.56
TRAPPC1-202ENST00000540486 LINC00158P58513 81 aa5.32□□□□□ -1.56
TRAPPC1-202ENST00000540486 C1orf137Q5JT78 98 aa5.32□□□□□ -1.56
TRAPPC1-202ENST00000540486 PLEKHB2Q96CS7 222 aa5.32□□□□□ -1.56
TRAPPC1-202ENST00000540486 LINC00167Q96N53 147 aa5.32□□□□□ -1.56
TRAPPC1-202ENST00000540486 TP73-AS1Q9UF72 201 aa5.32□□□□□ -1.56
TRAPPC1-202ENST00000540486 MYMXA0A1B0GTQ4 84 aa5.31□□□□□ -1.56
TRAPPC1-202ENST00000540486 E9PLD3 99 aa5.31□□□□□ -1.56
TRAPPC1-202ENST00000540486 IGLV7-43P04211 117 aa5.31□□□□□ -1.56
TRAPPC1-202ENST00000540486 VPREB1P12018 145 aa5.31□□□□□ -1.56
TRAPPC1-202ENST00000540486 KRTDAPP60985 99 aa5.31□□□□□ -1.56
TRAPPC1-202ENST00000540486 HERV-K104P63124 156 aa5.31□□□□□ -1.56
TRAPPC1-202ENST00000540486 UBE2BP63146 152 aa5.31□□□□□ -1.56
TRAPPC1-202ENST00000540486 MRPL55Q7Z7F7 128 aaKnown RBP5.31□□□□□ -1.56
TRAPPC1-202ENST00000540486 HIST3H2BBQ8N257 126 aa5.31□□□□□ -1.56
TRAPPC1-202ENST00000540486 RPL37AP8A6NKH3 93 aa5.3□□□□□ -1.56
TRAPPC1-202ENST00000540486 LINC01547P58512 204 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC1-202ENST00000540486 HERVK_113P61574 105 aa5.3□□□□□ -1.56
TRAPPC1-202ENST00000540486 LBHQ53QV2 105 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC1-202ENST00000540486 MEIG1Q5JSS6 88 aa5.3□□□□□ -1.56
TRAPPC1-202ENST00000540486 MIR7-3HGQ8N6C7 128 aa5.3□□□□□ -1.56
TRAPPC1-202ENST00000540486 PRR26Q8N8Z3 221 aa5.3□□□□□ -1.56
TRAPPC1-202ENST00000540486 IGKV2D-26A0A0A0MRZ7 120 aa5.29□□□□□ -1.56
TRAPPC1-202ENST00000540486 GAGE10A6NGK3 116 aa5.29□□□□□ -1.56
TRAPPC1-202ENST00000540486 LGALS3P17931 250 aaKnown RBP5.29□□□□□ -1.56
TRAPPC1-202ENST00000540486 SNRPEP62304 92 aaKnown RBP5.29□□□□□ -1.56
TRAPPC1-202ENST00000540486 HIST1H2BLQ99880 126 aa5.29□□□□□ -1.56
TRAPPC1-202ENST00000540486 LINC00587B1AMM8 73 aa5.28□□□□□ -1.56
TRAPPC1-202ENST00000540486 NMUP48645 174 aa5.28□□□□□ -1.56
TRAPPC1-202ENST00000540486 RPL24P83731 157 aaKnown RBP5.28□□□□□ -1.56
TRAPPC1-202ENST00000540486 ADAMTSL4-AS1Q5T5F5 129 aa5.28□□□□□ -1.56
TRAPPC1-202ENST00000540486 DAND5Q8N907 189 aa5.28□□□□□ -1.56
TRAPPC1-202ENST00000540486 TTTY13Q9BZ97 58 aa5.28□□□□□ -1.56
TRAPPC1-202ENST00000540486 IGLV1-50A0A075B6I6 118 aa5.27□□□□□ -1.57
TRAPPC1-202ENST00000540486 LOC107984156A0A0G2JMH3 177 aa5.27□□□□□ -1.57
TRAPPC1-202ENST00000540486 A0A0J9YXY3 114 aa5.27□□□□□ -1.57
TRAPPC1-202ENST00000540486 LOC105371267A0A1B0GV96 52 aa5.27□□□□□ -1.57
TRAPPC1-202ENST00000540486 C5orf52A6NGY3 159 aa5.27□□□□□ -1.57
TRAPPC1-202ENST00000540486 S100A6P06703 90 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms