RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 A0A0J9YXV3 536 aa3.01□□□□□ -1.93
CDH9-203ENST00000505045 VCYO14598 125 aa3.01□□□□□ -1.93
CDH9-203ENST00000505045 HSD52Q0P140 79 aa3.01□□□□□ -1.93
CDH9-203ENST00000505045 CFAP161Q6P656 301 aa3.01□□□□□ -1.93
CDH9-203ENST00000505045 C5orf38Q86SI9 138 aa3.01□□□□□ -1.93
CDH9-203ENST00000505045 CSDC2Q9Y534 153 aaKnown RBP3.01□□□□□ -1.93
CDH9-203ENST00000505045 RNF213Q63HN8 5207 aa3.01□□□□□ -1.93
CDH9-203ENST00000505045 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3□□□□□ -1.93
CDH9-203ENST00000505045 CKS2P33552 79 aa3□□□□□ -1.93
CDH9-203ENST00000505045 SYCNQ0VAF6 134 aa3□□□□□ -1.93
CDH9-203ENST00000505045 SS18Q15532 418 aa3□□□□□ -1.93
CDH9-203ENST00000505045 DPH3Q96FX2 82 aa3□□□□□ -1.93
CDH9-203ENST00000505045 KIR2DL4Q99706 377 aa3□□□□□ -1.93
CDH9-203ENST00000505045 TP73-AS1Q9UF72 201 aa3□□□□□ -1.93
CDH9-203ENST00000505045 LPAP08519 4548 aa3□□□□□ -1.93
CDH9-203ENST00000505045 IGHV3OR16-9A0A0B4J2B5 98 aa3□□□□□ -1.93
CDH9-203ENST00000505045 A0A1W2PNN7 141 aa3□□□□□ -1.93
CDH9-203ENST00000505045 H3BUT2 72 aa3□□□□□ -1.93
CDH9-203ENST00000505045 COX7A2LO14548 114 aa3□□□□□ -1.93
CDH9-203ENST00000505045 RPL32P62910 135 aaKnown RBP3□□□□□ -1.93
CDH9-203ENST00000505045 ZC2HC1BQ5TFG8 222 aa3□□□□□ -1.93
CDH9-203ENST00000505045 FA2HQ7L5A8 372 aa3□□□□□ -1.93
CDH9-203ENST00000505045 KRTAP11-1Q8IUC1 163 aa3□□□□□ -1.93
CDH9-203ENST00000505045 BOD1L2Q8IYS8 172 aa3□□□□□ -1.93
CDH9-203ENST00000505045 SIGMAR1Q99720 223 aa3□□□□□ -1.93
CDH9-203ENST00000505045 C20orf78Q9BR46 151 aa3□□□□□ -1.93
CDH9-203ENST00000505045 TIMM21Q9BVV7 248 aa3□□□□□ -1.93
CDH9-203ENST00000505045 A0A1B0GW15 77 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 A0A1W2PPM0 123 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 FAM168BA1KXE4 195 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 APOMO95445 188 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 PPP1R17O96001 155 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 SMIM13P0DJ93 91 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 SPAG11BQ08648 103 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 GAGE2BQ13066 116 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 KRTAP7-1Q8IUC3 87 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 C7orf33Q8WU49 177 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 CAMK2N2Q96S95 79 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 SPCS1Q9Y6A9 102 aa2.99□□□□□ -1.93
CDH9-203ENST00000505045 IGLV4-3A0A075B6K6 122 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 LOC389332A0A1B0GUA5 103 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 A0A1B0GV72 72 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 FABP2P12104 132 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 MT3P25713 68 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 RPL18AQ02543 176 aaKnown RBP2.98□□□□□ -1.93
CDH9-203ENST00000505045 SERTAD4-AS1Q5TG53 156 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 ORMDL3Q8N138 153 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 PRR26Q8N8Z3 221 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 PRELID3AQ96N28 172 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 SPANXA1Q9NS26 97 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 LOC107984640A0A0U1RRK4 108 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 H0Y8G0 127 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 J3QR89 54 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 MRPS36P82909 103 aaKnown RBP2.98□□□□□ -1.93
CDH9-203ENST00000505045 RPL24P83731 157 aaKnown RBP2.98□□□□□ -1.93
CDH9-203ENST00000505045 C9orf116Q5BN46 136 aaPredicted RBP2.98□□□□□ -1.93
CDH9-203ENST00000505045 LINC00242Q5T6M2 205 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 C2orf82Q6UX34 121 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 Q6ZRP5 223 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 PHF5AQ7RTV0 110 aaKnown RBP2.98□□□□□ -1.93
CDH9-203ENST00000505045 RAB37Q96AX2 223 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 HIGD1BQ9P298 99 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 C6orf48Q9UBA6 75 aa2.98□□□□□ -1.93
CDH9-203ENST00000505045 PRSS47A8MTI9 375 aa2.97□□□□□ -1.93
CDH9-203ENST00000505045 KIAA0087Q14695 138 aa2.97□□□□□ -1.93
CDH9-203ENST00000505045 UNQ6190/PRO20217Q6UXQ8 127 aa2.97□□□□□ -1.93
CDH9-203ENST00000505045 MTURNQ8N3F0 131 aa2.97□□□□□ -1.93
CDH9-203ENST00000505045 C2orf48Q96LS8 159 aa2.97□□□□□ -1.93
CDH9-203ENST00000505045 LINC01600Q96MT4 127 aa2.97□□□□□ -1.93
CDH9-203ENST00000505045 NAA38Q9BRA0 125 aaKnown RBP2.97□□□□□ -1.93
CDH9-203ENST00000505045 LINC00474Q9P2X8 69 aa2.97□□□□□ -1.93
CDH9-203ENST00000505045 PSORS1C2Q9UIG4 136 aa2.97□□□□□ -1.93
CDH9-203ENST00000505045 F8W1H4 67 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 IFI27P40305 119 aaPredicted RBP2.96□□□□□ -1.94
CDH9-203ENST00000505045 UBE2D1P51668 147 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 CKS1BP61024 79 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 SRSF9Q13242 221 aaKnown RBP eCLIP2.96□□□□□ -1.94
CDH9-203ENST00000505045 TAL2Q16559 108 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 C2orf66Q6UXQ4 117 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 MRPL35Q9NZE8 188 aaKnown RBP2.96□□□□□ -1.94
CDH9-203ENST00000505045 A0A087WZ39 114 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 A0A096LNJ9 63 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 IGIPA6NJ69 53 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 E9PLD3 99 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 HBDP02042 147 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 FAM19A5Q7Z5A7 132 aaPredicted RBP2.96□□□□□ -1.94
CDH9-203ENST00000505045 Q8N8P6 123 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 IFI27L1Q96BM0 104 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 TMEM141Q96I45 108 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 MAP1LC3AQ9H492 121 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 SPANXB1Q9NS25 103 aaPredicted RBP2.96□□□□□ -1.94
CDH9-203ENST00000505045 PYGO1Q9Y3Y4 419 aa2.96□□□□□ -1.94
CDH9-203ENST00000505045 LINC01546A6NGU7 62 aa2.95□□□□□ -1.94
CDH9-203ENST00000505045 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
CDH9-203ENST00000505045 NDUFA1O15239 70 aa2.95□□□□□ -1.94
CDH9-203ENST00000505045 KRTAP10-8P60410 259 aa2.95□□□□□ -1.94
CDH9-203ENST00000505045 SMAGPQ0VAQ4 97 aa2.95□□□□□ -1.94
CDH9-203ENST00000505045 GAGE2EQ4V326 116 aa2.95□□□□□ -1.94
CDH9-203ENST00000505045 C9orf129Q5T035 196 aaKnown RBP2.95□□□□□ -1.94
CDH9-203ENST00000505045 SPINK6Q6UWN8 80 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms