RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 C10orf25Q5T742 122 aa6.54□□□□□ -1.36
COL1A1-210ENST00000504289 CAMK2N2Q96S95 79 aa6.54□□□□□ -1.36
COL1A1-210ENST00000504289 B9D2Q9BPU9 175 aa6.54□□□□□ -1.36
COL1A1-210ENST00000504289 H3BQ85 93 aa6.53□□□□□ -1.36
COL1A1-210ENST00000504289 ACYP1P07311 99 aa6.53□□□□□ -1.36
COL1A1-210ENST00000504289 BAALC-AS2P0C853 105 aa6.53□□□□□ -1.36
COL1A1-210ENST00000504289 C6orf223Q8N319 242 aa6.53□□□□□ -1.36
COL1A1-210ENST00000504289 C15orf56Q8N910 161 aa6.53□□□□□ -1.36
COL1A1-210ENST00000504289 C6orf48Q9UBA6 75 aa6.53□□□□□ -1.36
COL1A1-210ENST00000504289 LINC00588Q9Y4M8 146 aa6.53□□□□□ -1.36
COL1A1-210ENST00000504289 NDUFC2-KCTD14E9PQ53 114 aa6.52□□□□□ -1.37
COL1A1-210ENST00000504289 IGLV6-57P01721 117 aa6.52□□□□□ -1.37
COL1A1-210ENST00000504289 NHLRC4P0CG21 123 aaPredicted RBP6.52□□□□□ -1.37
COL1A1-210ENST00000504289 INAFM2P0DMQ5 153 aa6.52□□□□□ -1.37
COL1A1-210ENST00000504289 C9orf116Q5BN46 136 aaPredicted RBP6.52□□□□□ -1.37
COL1A1-210ENST00000504289 FAM218AQ96MZ4 157 aa6.52□□□□□ -1.37
COL1A1-210ENST00000504289 LINC00167Q96N53 147 aa6.52□□□□□ -1.37
COL1A1-210ENST00000504289 IGKV2D-24A0A075B6R9 120 aa6.51□□□□□ -1.37
COL1A1-210ENST00000504289 TRBV7-6A0A0J9YX20 115 aa6.51□□□□□ -1.37
COL1A1-210ENST00000504289 TEX49A0A1B0GTD5 131 aa6.51□□□□□ -1.37
COL1A1-210ENST00000504289 S100A7L2Q5SY68 101 aa6.51□□□□□ -1.37
COL1A1-210ENST00000504289 MRAPQ8TCY5 172 aa6.51□□□□□ -1.37
COL1A1-210ENST00000504289 CDIP1Q9H305 208 aa6.51□□□□□ -1.37
COL1A1-210ENST00000504289 PRB2P02812 416 aaPredicted RBP6.5□□□□□ -1.37
COL1A1-210ENST00000504289 TLX1NBP0CAT3 122 aa6.5□□□□□ -1.37
COL1A1-210ENST00000504289 SYCNQ0VAF6 134 aa6.5□□□□□ -1.37
COL1A1-210ENST00000504289 GHRHP01286 108 aa6.49□□□□□ -1.37
COL1A1-210ENST00000504289 Q6ZRU5 148 aa6.49□□□□□ -1.37
COL1A1-210ENST00000504289 TGP01266 2768 aa6.49□□□□□ -1.37
COL1A1-210ENST00000504289 HUWE1Q7Z6Z7 4374 aaKnown RBP6.48□□□□□ -1.37
COL1A1-210ENST00000504289 A0A087WYN8 130 aa6.48□□□□□ -1.37
COL1A1-210ENST00000504289 M0R378 163 aa6.48□□□□□ -1.37
COL1A1-210ENST00000504289 HIGD2BQ4VC39 106 aa6.48□□□□□ -1.37
COL1A1-210ENST00000504289 OBSCN-AS1Q96MR7 158 aa6.48□□□□□ -1.37
COL1A1-210ENST00000504289 ORMDL1Q9P0S3 153 aa6.48□□□□□ -1.37
COL1A1-210ENST00000504289 PLA2G2DQ9UNK4 145 aa6.48□□□□□ -1.37
COL1A1-210ENST00000504289 MEGF8Q7Z7M0 2845 aa6.47□□□□□ -1.37
COL1A1-210ENST00000504289 TMEM256-PLSCR3K7ERE1 68 aa6.47□□□□□ -1.37
COL1A1-210ENST00000504289 LECT2O14960 151 aa6.47□□□□□ -1.37
COL1A1-210ENST00000504289 Q8N814 137 aa6.47□□□□□ -1.37
COL1A1-210ENST00000504289 LINC00526Q96FQ7 95 aa6.47□□□□□ -1.37
COL1A1-210ENST00000504289 JMJD7-PLA2G4BH0Y9G9 81 aa6.46□□□□□ -1.38
COL1A1-210ENST00000504289 NCR3O14931 201 aa6.46□□□□□ -1.38
COL1A1-210ENST00000504289 VPREB1P12018 145 aa6.46□□□□□ -1.38
COL1A1-210ENST00000504289 PRR3P79522 188 aaKnown RBP6.46□□□□□ -1.38
COL1A1-210ENST00000504289 C6orf99Q4VX62 202 aa6.46□□□□□ -1.38
COL1A1-210ENST00000504289 LINC00575Q6W349 94 aa6.46□□□□□ -1.38
COL1A1-210ENST00000504289 Q8NDZ9 215 aa6.46□□□□□ -1.38
COL1A1-210ENST00000504289 C22orf24Q9Y442 160 aa6.46□□□□□ -1.38
COL1A1-210ENST00000504289 STAB2Q8WWQ8 2551 aa6.45□□□□□ -1.38
COL1A1-210ENST00000504289 RPL18AQ02543 176 aaKnown RBP6.45□□□□□ -1.38
COL1A1-210ENST00000504289 Q9HAA7 133 aa6.45□□□□□ -1.38
COL1A1-210ENST00000504289 TRAV23DV6A0A075B6W5 121 aa6.44□□□□□ -1.38
COL1A1-210ENST00000504289 NUPR2A6NF83 97 aa6.44□□□□□ -1.38
COL1A1-210ENST00000504289 USP17L23D6RBM5 183 aa6.44□□□□□ -1.38
COL1A1-210ENST00000504289 DIRC1Q969H9 104 aa6.44□□□□□ -1.38
COL1A1-210ENST00000504289 APLNQ9ULZ1 77 aa6.44□□□□□ -1.38
COL1A1-210ENST00000504289 IGLV5-37A0A075B6J1 123 aa6.43□□□□□ -1.38
COL1A1-210ENST00000504289 TRBV10-3A0A0K0K1G6 114 aa6.43□□□□□ -1.38
COL1A1-210ENST00000504289 hADV29S1A0JD25 119 aa6.43□□□□□ -1.38
COL1A1-210ENST00000504289 Q6Q795 121 aa6.43□□□□□ -1.38
COL1A1-210ENST00000504289 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
COL1A1-210ENST00000504289 ZNF73O43830 326 aaPredicted RBP6.42□□□□□ -1.38
COL1A1-210ENST00000504289 XGP55808 180 aa6.42□□□□□ -1.38
COL1A1-210ENST00000504289 C14orf177Q52M58 125 aa6.42□□□□□ -1.38
COL1A1-210ENST00000504289 SDIM1Q6ZPB5 146 aa6.42□□□□□ -1.38
COL1A1-210ENST00000504289 Q6ZRP5 223 aa6.42□□□□□ -1.38
COL1A1-210ENST00000504289 PKIGQ9Y2B9 76 aa6.42□□□□□ -1.38
COL1A1-210ENST00000504289 DNAH9Q9NYC9 4486 aa6.42□□□□□ -1.38
COL1A1-210ENST00000504289 COX7BP24311 80 aa6.41□□□□□ -1.38
COL1A1-210ENST00000504289 ELOF1P60002 83 aaKnown RBP6.41□□□□□ -1.38
COL1A1-210ENST00000504289 TTC32Q5I0X7 151 aa6.41□□□□□ -1.38
COL1A1-210ENST00000504289 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.41□□□□□ -1.38
COL1A1-210ENST00000504289 DYNC2H1Q8NCM8 4307 aaKnown RBP6.4□□□□□ -1.38
COL1A1-210ENST00000504289 LOC107984640A0A0U1RRK4 108 aa6.4□□□□□ -1.38
COL1A1-210ENST00000504289 PDE6GP18545 87 aa6.4□□□□□ -1.38
COL1A1-210ENST00000504289 CNBPP62633 177 aaKnown RBP6.4□□□□□ -1.38
COL1A1-210ENST00000504289 UBE2DNLQ8IWF7 75 aa6.4□□□□□ -1.38
COL1A1-210ENST00000504289 NKAPP1Q8N9T2 125 aa6.4□□□□□ -1.38
COL1A1-210ENST00000504289 IMUPQ9GZP8 106 aa6.4□□□□□ -1.38
COL1A1-210ENST00000504289 KCNQ1DNQ9H478 68 aa6.4□□□□□ -1.38
COL1A1-210ENST00000504289 MT-ATP8P03928 68 aa6.39□□□□□ -1.39
COL1A1-210ENST00000504289 GAGE2EQ4V326 116 aa6.39□□□□□ -1.39
COL1A1-210ENST00000504289 C9orf129Q5T035 196 aaKnown RBP6.39□□□□□ -1.39
COL1A1-210ENST00000504289 LINC00643Q86TS7 51 aa6.39□□□□□ -1.39
COL1A1-210ENST00000504289 GAGE2DQ9UEU5 116 aa6.39□□□□□ -1.39
COL1A1-210ENST00000504289 TRBV7-7A0A0K0K1E9 115 aa6.37□□□□□ -1.39
COL1A1-210ENST00000504289 PRYO14603 147 aa6.37□□□□□ -1.39
COL1A1-210ENST00000504289 SLPIP03973 132 aa6.37□□□□□ -1.39
COL1A1-210ENST00000504289 CCKP06307 115 aa6.37□□□□□ -1.39
COL1A1-210ENST00000504289 GAGE2BQ13066 116 aa6.37□□□□□ -1.39
COL1A1-210ENST00000504289 ANAPC13Q9BS18 74 aa6.37□□□□□ -1.39
COL1A1-210ENST00000504289 LOC110117498A0A087WWA1 95 aa6.36□□□□□ -1.39
COL1A1-210ENST00000504289 LINC00528Q8N1L1 170 aa6.36□□□□□ -1.39
COL1A1-210ENST00000504289 COL7A1Q02388 2944 aa6.36□□□□□ -1.39
COL1A1-210ENST00000504289 DNAH1Q9P2D7 4330 aa6.36□□□□□ -1.39
COL1A1-210ENST00000504289 PSCAO43653 123 aa6.35□□□□□ -1.39
COL1A1-210ENST00000504289 CASC10Q5T4H9 136 aa6.35□□□□□ -1.39
COL1A1-210ENST00000504289 GAGE2AQ6NT46 116 aa6.35□□□□□ -1.39
COL1A1-210ENST00000504289 C7orf33Q8WU49 177 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms