RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 LINC01546A6NGU7 62 aa6.77□□□□□ -1.33
RAPGEF3-213ENST00000494764 RPL24P83731 157 aaKnown RBP6.77□□□□□ -1.33
RAPGEF3-213ENST00000494764 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
RAPGEF3-213ENST00000494764 TRAV9-1A0A075B6T8 112 aa6.76□□□□□ -1.33
RAPGEF3-213ENST00000494764 PRLHP81277 87 aa6.76□□□□□ -1.33
RAPGEF3-213ENST00000494764 FA2HQ7L5A8 372 aa6.76□□□□□ -1.33
RAPGEF3-213ENST00000494764 GNB1LQ9BYB4 327 aa6.76□□□□□ -1.33
RAPGEF3-213ENST00000494764 TSTD3H0UI37 97 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST1H2BKO60814 126 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 TRGC2P03986 189 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST1H2BJP06899 126 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST1H2BOP23527 126 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST1H2BBP33778 126 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST1H2BDP58876 126 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST1H2BCP62807 126 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST2H2BEQ16778 126 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 COX19Q49B96 90 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST1H2BHQ93079 126 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST1H2BNQ99877 126 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST1H2BMQ99879 126 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 TMEM126AQ9H061 195 aa6.75□□□□□ -1.33
RAPGEF3-213ENST00000494764 TMEM238C9JI98 176 aa6.74□□□□□ -1.33
RAPGEF3-213ENST00000494764 COX17Q14061 63 aa6.74□□□□□ -1.33
RAPGEF3-213ENST00000494764 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
RAPGEF3-213ENST00000494764 PLEKHB2Q96CS7 222 aa6.74□□□□□ -1.33
RAPGEF3-213ENST00000494764 SND1-IT1Q9HBX3 110 aa6.74□□□□□ -1.33
RAPGEF3-213ENST00000494764 ERG28Q9UKR5 140 aa6.74□□□□□ -1.33
RAPGEF3-213ENST00000494764 VPREB1P12018 145 aa6.73□□□□□ -1.33
RAPGEF3-213ENST00000494764 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
RAPGEF3-213ENST00000494764 HIST3H2BBQ8N257 126 aa6.73□□□□□ -1.33
RAPGEF3-213ENST00000494764 ZNF625Q96I27 306 aaPredicted RBP6.73□□□□□ -1.33
RAPGEF3-213ENST00000494764 IGLV5-39A0A0G2JS06 123 aa6.72□□□□□ -1.33
RAPGEF3-213ENST00000494764 M0R378 163 aa6.72□□□□□ -1.33
RAPGEF3-213ENST00000494764 IGLC3P0DOY3 106 aa6.72□□□□□ -1.33
RAPGEF3-213ENST00000494764 COA6Q5JTJ3 125 aaKnown RBP6.72□□□□□ -1.33
RAPGEF3-213ENST00000494764 C4orf48Q5BLP8 95 aa6.71□□□□□ -1.34
RAPGEF3-213ENST00000494764 SPAG11AQ6PDA7 123 aa6.71□□□□□ -1.34
RAPGEF3-213ENST00000494764 C3orf22Q8N5N4 141 aa6.71□□□□□ -1.34
RAPGEF3-213ENST00000494764 HIGD2AQ9BW72 106 aa6.71□□□□□ -1.34
RAPGEF3-213ENST00000494764 PPDPFQ9H3Y8 114 aa6.71□□□□□ -1.34
RAPGEF3-213ENST00000494764 FABP4P15090 132 aa6.7□□□□□ -1.34
RAPGEF3-213ENST00000494764 ZNF22P17026 224 aaPredicted RBP6.7□□□□□ -1.34
RAPGEF3-213ENST00000494764 LINC00587B1AMM8 73 aa6.69□□□□□ -1.34
RAPGEF3-213ENST00000494764 LINC00158P58513 81 aa6.69□□□□□ -1.34
RAPGEF3-213ENST00000494764 JOSD1Q15040 202 aaPredicted RBP6.69□□□□□ -1.34
RAPGEF3-213ENST00000494764 SFTA2Q6UW10 78 aa6.69□□□□□ -1.34
RAPGEF3-213ENST00000494764 TRAPPC1Q9Y5R8 145 aa6.69□□□□□ -1.34
RAPGEF3-213ENST00000494764 LINC00614P0C842 121 aa6.68□□□□□ -1.34
RAPGEF3-213ENST00000494764 PYY3Q5JQD4 70 aa6.68□□□□□ -1.34
RAPGEF3-213ENST00000494764 TMEM170BQ5T4T1 132 aa6.68□□□□□ -1.34
RAPGEF3-213ENST00000494764 BAGE3Q86Y29 109 aa6.68□□□□□ -1.34
RAPGEF3-213ENST00000494764 HIST1H2BLQ99880 126 aa6.68□□□□□ -1.34
RAPGEF3-213ENST00000494764 HBDP02042 147 aa6.67□□□□□ -1.34
RAPGEF3-213ENST00000494764 LINC00337Q8N6G1 96 aa6.67□□□□□ -1.34
RAPGEF3-213ENST00000494764 Q8NDZ9 215 aa6.67□□□□□ -1.34
RAPGEF3-213ENST00000494764 SPRR4Q96PI1 79 aa6.67□□□□□ -1.34
RAPGEF3-213ENST00000494764 A0A096LNJ9 63 aa6.66□□□□□ -1.34
RAPGEF3-213ENST00000494764 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
RAPGEF3-213ENST00000494764 C11orf86A6NJI1 115 aa6.66□□□□□ -1.34
RAPGEF3-213ENST00000494764 ZNF706Q9Y5V0 76 aaPredicted RBP6.66□□□□□ -1.34
RAPGEF3-213ENST00000494764 DDTP30046 118 aa6.65□□□□□ -1.34
RAPGEF3-213ENST00000494764 PMCHL1Q16048 86 aa6.65□□□□□ -1.34
RAPGEF3-213ENST00000494764 FP248Q71RG6 208 aaPredicted RBP6.65□□□□□ -1.34
RAPGEF3-213ENST00000494764 C18orf32Q8TCD1 76 aa6.64□□□□□ -1.35
RAPGEF3-213ENST00000494764 URB1-AS1Q96HZ7 61 aa6.64□□□□□ -1.35
RAPGEF3-213ENST00000494764 CHTOPQ9Y3Y2 248 aaKnown RBP6.64□□□□□ -1.35
RAPGEF3-213ENST00000494764 DAND5Q8N907 189 aa6.63□□□□□ -1.35
RAPGEF3-213ENST00000494764 SMCR5Q8TEV8 140 aa6.63□□□□□ -1.35
RAPGEF3-213ENST00000494764 PRYO14603 147 aa6.62□□□□□ -1.35
RAPGEF3-213ENST00000494764 BOD1L2Q8IYS8 172 aa6.62□□□□□ -1.35
RAPGEF3-213ENST00000494764 Q8NBF4 154 aa6.62□□□□□ -1.35
RAPGEF3-213ENST00000494764 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
RAPGEF3-213ENST00000494764 ETDCA0A1B0GVM5 59 aa6.61□□□□□ -1.35
RAPGEF3-213ENST00000494764 SCGB1D1O95968 90 aa6.61□□□□□ -1.35
RAPGEF3-213ENST00000494764 SPINK1P00995 79 aa6.61□□□□□ -1.35
RAPGEF3-213ENST00000494764 SMIM13P0DJ93 91 aa6.61□□□□□ -1.35
RAPGEF3-213ENST00000494764 MEIG1Q5JSS6 88 aa6.61□□□□□ -1.35
RAPGEF3-213ENST00000494764 TMEM223A0PJW6 202 aa6.6□□□□□ -1.35
RAPGEF3-213ENST00000494764 KCNQ1DNQ9H478 68 aa6.6□□□□□ -1.35
RAPGEF3-213ENST00000494764 NCR3O14931 201 aa6.59□□□□□ -1.35
RAPGEF3-213ENST00000494764 KRTAP13-3Q3SY46 172 aa6.59□□□□□ -1.35
RAPGEF3-213ENST00000494764 MIR7-3HGQ8N6C7 128 aa6.59□□□□□ -1.35
RAPGEF3-213ENST00000494764 C14orf144Q96I85 54 aa6.59□□□□□ -1.35
RAPGEF3-213ENST00000494764 TRAV12-1A0A0B4J245 112 aa6.58□□□□□ -1.36
RAPGEF3-213ENST00000494764 M0R143 59 aa6.58□□□□□ -1.36
RAPGEF3-213ENST00000494764 SPRR1AP35321 89 aa6.58□□□□□ -1.36
RAPGEF3-213ENST00000494764 LINC01547P58512 204 aaPredicted RBP6.58□□□□□ -1.36
RAPGEF3-213ENST00000494764 HERV-K104P63124 156 aa6.58□□□□□ -1.36
RAPGEF3-213ENST00000494764 ASB16-AS1Q495Z4 193 aa6.58□□□□□ -1.36
RAPGEF3-213ENST00000494764 GAGE2AQ6NT46 116 aa6.58□□□□□ -1.36
RAPGEF3-213ENST00000494764 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
RAPGEF3-213ENST00000494764 IFI27L1Q96BM0 104 aa6.57□□□□□ -1.36
RAPGEF3-213ENST00000494764 MAP1LC3CQ9BXW4 147 aa6.57□□□□□ -1.36
RAPGEF3-213ENST00000494764 NDUFA12Q9UI09 145 aa6.57□□□□□ -1.36
RAPGEF3-213ENST00000494764 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
RAPGEF3-213ENST00000494764 KRTAP4-16G5E9R7 235 aaPredicted RBP6.56□□□□□ -1.36
RAPGEF3-213ENST00000494764 SSBP3-AS1Q7Z2R9 100 aa6.56□□□□□ -1.36
RAPGEF3-213ENST00000494764 PRO1933Q9H354 126 aa6.56□□□□□ -1.36
RAPGEF3-213ENST00000494764 IGLV9-49A0A0B4J1Y8 123 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms