RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 FAM104AQ969W3 186 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 LINC00526Q96FQ7 95 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 RYR2Q92736 4967 aa2.9□□□□□ -1.95
NSMCE4A-208ENST00000477289 IGKV2-24A0A0C4DH68 120 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 CDK2AP2O75956 126 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 LINC00158P58513 81 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 S100A12P80511 92 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 COX17Q14061 63 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 GAGE2EQ4V326 116 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 LINC01545Q5VT33 79 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 UNQ6190/PRO20217Q6UXQ8 127 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 HIST3H2BBQ8N257 126 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 COPS9Q8WXC6 57 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 PMCHL2Q9BQD1 86 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 MIEN1Q9BRT3 115 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 GAGE2DQ9UEU5 116 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 KMT2CQ8NEZ4 4911 aaKnown RBP2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 ALMS1Q8TCU4 4167 aa2.89□□□□□ -1.95
NSMCE4A-208ENST00000477289 C5orf52A6NGY3 159 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 KRTAP16-1A8MUX0 517 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 NDUFC2-KCTD14E9PQ53 114 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 J3QQQ9 107 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 TLX1NBP0CAT3 122 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 PFN2P35080 140 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 FUSP35637 526 aaKnown RBP eCLIP2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 KIAA0087Q14695 138 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 LINC01620Q4KN68 170 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 C2orf82Q6UX34 121 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 SCGB1D4Q6XE38 83 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 SDIM1Q6ZPB5 146 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 ZNF625Q96I27 306 aaPredicted RBP2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 HIST1H2BLQ99880 126 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 C6orf48Q9UBA6 75 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 NDUFA12Q9UI09 145 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 ERG28Q9UKR5 140 aa2.88□□□□□ -1.95
NSMCE4A-208ENST00000477289 E9PLD3 99 aa2.87□□□□□ -1.95
NSMCE4A-208ENST00000477289 KRTAP10-1P60331 282 aa2.87□□□□□ -1.95
NSMCE4A-208ENST00000477289 UBE2BP63146 152 aa2.87□□□□□ -1.95
NSMCE4A-208ENST00000477289 LBHQ53QV2 105 aaPredicted RBP2.87□□□□□ -1.95
NSMCE4A-208ENST00000477289 NKAPP1Q8N9T2 125 aa2.87□□□□□ -1.95
NSMCE4A-208ENST00000477289 CBY1Q9Y3M2 126 aa2.87□□□□□ -1.95
NSMCE4A-208ENST00000477289 DYNC2H1Q8NCM8 4307 aaKnown RBP2.87□□□□□ -1.95
NSMCE4A-208ENST00000477289 LYSTQ99698 3801 aa2.86□□□□□ -1.95
NSMCE4A-208ENST00000477289 A0A096LNI7 61 aa2.86□□□□□ -1.95
NSMCE4A-208ENST00000477289 A0A0U1RRA0 63 aa2.86□□□□□ -1.95
NSMCE4A-208ENST00000477289 ZNF815PA8K554 130 aa2.86□□□□□ -1.95
NSMCE4A-208ENST00000477289 TMEM238C9JI98 176 aa2.86□□□□□ -1.95
NSMCE4A-208ENST00000477289 C9orf116Q5BN46 136 aaPredicted RBP2.86□□□□□ -1.95
NSMCE4A-208ENST00000477289 VAMP8Q9BV40 100 aa2.86□□□□□ -1.95
NSMCE4A-208ENST00000477289 HYDINQ4G0P3 5121 aa2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 RYR3Q15413 4870 aa2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 EPM2AB3EWF7 344 aa2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 CHTF8P0CG12 524 aa2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 SMIM13P0DJ93 91 aa2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 SRSF9Q13242 221 aaKnown RBP eCLIP2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 Q6ZRP5 223 aa2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 SCXQ7RTU7 201 aa2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 FAM19A5Q7Z5A7 132 aaPredicted RBP2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 ATOH7Q8N100 152 aa2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 CIRBP-AS1Q8TBR5 109 aa2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 SPACA4Q8TDM5 124 aa2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 XAGE1AQ9HD64 81 aa2.85□□□□□ -1.95
NSMCE4A-208ENST00000477289 M0QXV9 152 aa2.84□□□□□ -1.95
NSMCE4A-208ENST00000477289 TIMM17BO60830 172 aa2.84□□□□□ -1.95
NSMCE4A-208ENST00000477289 HINT1P49773 126 aaPredicted RBP2.84□□□□□ -1.95
NSMCE4A-208ENST00000477289 RPL37AP61513 92 aaKnown RBP2.84□□□□□ -1.95
NSMCE4A-208ENST00000477289 JOSD1Q15040 202 aaPredicted RBP2.84□□□□□ -1.95
NSMCE4A-208ENST00000477289 S100A7L2Q5SY68 101 aa2.84□□□□□ -1.95
NSMCE4A-208ENST00000477289 GAGE2AQ6NT46 116 aa2.84□□□□□ -1.95
NSMCE4A-208ENST00000477289 Q6ZSA8 131 aa2.84□□□□□ -1.95
NSMCE4A-208ENST00000477289 Q6ZVH6 145 aa2.84□□□□□ -1.95
NSMCE4A-208ENST00000477289 MIR7-3HGQ8N6C7 128 aa2.84□□□□□ -1.95
NSMCE4A-208ENST00000477289 PLAC8Q9NZF1 115 aa2.84□□□□□ -1.95
NSMCE4A-208ENST00000477289 A0A0J9YXY3 114 aa2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 SMR3BP02814 79 aaPredicted RBP2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 VPREB1P12018 145 aa2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 IFITM1P13164 125 aa2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 KRTAP10-8P60410 259 aa2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 KRTAP13-3Q3SY46 172 aa2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 SPATA45Q537H7 98 aa2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 MRPL55Q7Z7F7 128 aaKnown RBP2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 BOD1L2Q8IYS8 172 aa2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 LINC00518Q8N0U6 118 aa2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 SND1-IT1Q9HBX3 110 aa2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 TP73-AS1Q9UF72 201 aa2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 KMT2AQ03164 3969 aa2.83□□□□□ -1.96
NSMCE4A-208ENST00000477289 VPS13DQ5THJ4 4388 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 A0A087X002 238 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 IGKV2D-26A0A0A0MRZ7 120 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 M0R378 163 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 XGP55808 180 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 DSCR10P59022 87 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 TSPEAR-AS2P59090 65 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 NPC2P61916 151 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 HAMPP81172 84 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 Q5VSD8 79 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 SLC25A34Q6PIV7 304 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 OR13C6PQ8NH95 151 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 HIST1H4GQ99525 98 aa2.82□□□□□ -1.96
NSMCE4A-208ENST00000477289 C22orf24Q9Y442 160 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 394.5 ms